RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 TTI2Q6NXR4 508 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 CNNM4Q6P4Q7 775 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 P2RX5Q93086 422 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 C6orf50Q9HD87 102 aa12.77□□□□□ -0.37
PTPN20-204ENST00000374346 B4DLN1 442 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 STXBP3O00186 592 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 ABL1P00519 1130 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 MTIF2P46199 727 aaKnown RBP12.76□□□□□ -0.37
PTPN20-204ENST00000374346 LMAN1P49257 510 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 PMS1P54277 932 aaKnown RBP12.76□□□□□ -0.37
PTPN20-204ENST00000374346 ORC2Q13416 577 aaPredicted RBP12.76□□□□□ -0.37
PTPN20-204ENST00000374346 NONOQ15233 471 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTPN20-204ENST00000374346 SLC4A8Q2Y0W8 1093 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 SOGA3Q5TF21 947 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 NCAPH2Q6IBW4 605 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 CCDC70Q6NSX1 233 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 GOLGA5Q8TBA6 731 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 FAM71BQ8TC56 605 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 JAKMIP2Q96AA8 810 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 CALML4Q96GE6 196 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 ZMYND12Q9H0C1 365 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 TSPYL1Q9H0U9 437 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 TMEM60Q9H2L4 133 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 SEC63Q9UGP8 760 aaKnown RBP12.76□□□□□ -0.37
PTPN20-204ENST00000374346 CNTNAP4Q9C0A0 1308 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 ANO9A1A5B4 782 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 PP2D1A8MPX8 630 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 H3BQF6 201 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 CCNT1O60563 726 aaKnown RBP12.76□□□□□ -0.37
PTPN20-204ENST00000374346 ZPR1O75312 459 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 NAPAP54920 295 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 SPA17Q15506 151 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 ZSCAN26Q16670 478 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 PAPD7Q5XG87 772 aaKnown RBP12.76□□□□□ -0.37
PTPN20-204ENST00000374346 GOLGA6L1Q8N7Z2 621 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 CCDC102AQ96A19 550 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 NOC4LQ9BVI4 516 aaKnown RBP12.76□□□□□ -0.37
PTPN20-204ENST00000374346 VIPAS39Q9H9C1 493 aa12.76□□□□□ -0.37
PTPN20-204ENST00000374346 MKRN1Q9UHC7 482 aaKnown RBP12.76□□□□□ -0.37
PTPN20-204ENST00000374346 REXO2Q9Y3B8 237 aaKnown RBP12.76□□□□□ -0.37
PTPN20-204ENST00000374346 TARSL2A2RTX5 802 aaKnown RBP12.75□□□□□ -0.37
PTPN20-204ENST00000374346 PALM3A6NDB9 673 aaPredicted RBP12.75□□□□□ -0.37
PTPN20-204ENST00000374346 EIF3CLB5ME19 914 aaKnown RBP12.75□□□□□ -0.37
PTPN20-204ENST00000374346 ADAMTS3O15072 1205 aa12.75□□□□□ -0.37
PTPN20-204ENST00000374346 FGFR1OPO95684 399 aaKnown RBP12.75□□□□□ -0.37
PTPN20-204ENST00000374346 PLCG1P19174 1290 aa12.75□□□□□ -0.37
PTPN20-204ENST00000374346 ASIC1P78348 528 aa12.75□□□□□ -0.37
PTPN20-204ENST00000374346 CDK17Q00537 523 aa12.75□□□□□ -0.37
PTPN20-204ENST00000374346 KIF5AQ12840 1032 aa12.75□□□□□ -0.37
PTPN20-204ENST00000374346 FIGNQ5HY92 759 aa12.75□□□□□ -0.37
PTPN20-204ENST00000374346 TYW1BQ6NUM6 668 aa12.75□□□□□ -0.37
PTPN20-204ENST00000374346 BARGINQ6ZT62 677 aa12.75□□□□□ -0.37
PTPN20-204ENST00000374346 LINC00116Q8NCU8 138 aa12.75□□□□□ -0.37
PTPN20-204ENST00000374346 PLIN2Q99541 437 aa12.75□□□□□ -0.37
PTPN20-204ENST00000374346 EIF3CQ99613 913 aaKnown RBP12.75□□□□□ -0.37
PTPN20-204ENST00000374346 C7orf25Q9BPX7 421 aa12.75□□□□□ -0.37
PTPN20-204ENST00000374346 SPZ1Q9BXG8 430 aa12.75□□□□□ -0.37
PTPN20-204ENST00000374346 TRIM9Q9C026 710 aa12.75□□□□□ -0.37
PTPN20-204ENST00000374346 NHEJ1Q9H9Q4 299 aaPredicted RBP12.75□□□□□ -0.37
PTPN20-204ENST00000374346 NARFQ9UHQ1 456 aa12.75□□□□□ -0.37
PTPN20-204ENST00000374346 AHDC1Q5TGY3 1603 aaPredicted RBP12.75□□□□□ -0.37
PTPN20-204ENST00000374346 A0A1W2PQJ5 194 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 USP17L3A6NCW0 530 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 USP17L4A6NCW7 530 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 KLRF2D3W0D1 207 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 USO1O60763 962 aaKnown RBP12.74□□□□□ -0.37
PTPN20-204ENST00000374346 HOXA7P31268 230 aaPredicted RBP12.74□□□□□ -0.37
PTPN20-204ENST00000374346 LETM2Q2VYF4 491 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 WDR59Q6PJI9 974 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 USP17L1Q7RTZ2 530 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 NEK8Q86SG6 692 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 NOA1Q8NC60 698 aaKnown RBP12.74□□□□□ -0.37
PTPN20-204ENST00000374346 CAGE1Q8TC20 777 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 RRP36Q96EU6 259 aaKnown RBP12.74□□□□□ -0.37
PTPN20-204ENST00000374346 CNOT6LQ96LI5 555 aaKnown RBP12.74□□□□□ -0.37
PTPN20-204ENST00000374346 TMEM47Q9BQJ4 181 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 ANKIB1Q9P2G1 1089 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 NRAPQ86VF7 1730 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 NAV1Q8NEY1 1877 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 SPATA31A5Q5VU36 1347 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 SPATA31A7Q8IWB4 1347 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 NUTM2BA6NNL0 878 aaPredicted RBP12.74□□□□□ -0.37
PTPN20-204ENST00000374346 NUTM2EB1AL46 878 aaPredicted RBP12.74□□□□□ -0.37
PTPN20-204ENST00000374346 IVLP07476 585 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 USP14P54578 494 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 HERVK_113P62684 666 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 TXNRD1Q16881 649 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 COBLL1Q53SF7 1204 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 DYNLL2Q96FJ2 89 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 CCDC42Q96M95 316 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 MTMR7Q9Y216 660 aa12.74□□□□□ -0.37
PTPN20-204ENST00000374346 SMCO2A6NFE2 343 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 ENC1O14682 589 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 CYTH3O43739 400 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 SMARCA1P28370 1054 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 PPP4CP60510 307 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 SH3RF3Q8TEJ3 882 aaPredicted RBP12.73□□□□□ -0.37
PTPN20-204ENST00000374346 ERGIC2Q96RQ1 377 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 RAB34Q9BZG1 259 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 TTYH3Q9C0H2 523 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms