RNA–Protein interactions for RNA: ENST00000373104.5

CSF3R-204, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF3R, Length 2,953 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-204ENST00000373104 CEP85LQ5SZL2 805 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 IFIT1BQ5T764 474 aaKnown RBP13.89□□□□□ -0.19
CSF3R-204ENST00000373104 SPATA5Q8NB90 893 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 STAG1Q8WVM7 1258 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 FBXO3Q9UK99 471 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.89□□□□□ -0.19
CSF3R-204ENST00000373104 BACH1O14867 736 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 HEXIM1O94992 359 aaKnown RBP13.89□□□□□ -0.19
CSF3R-204ENST00000373104 PDE8BO95263 885 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 EPB41P11171 864 aaKnown RBP13.89□□□□□ -0.19
CSF3R-204ENST00000373104 TCP1P17987 556 aaKnown RBP13.89□□□□□ -0.19
CSF3R-204ENST00000373104 NLRP14Q86W24 1093 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 IQSEC3Q9UPP2 1182 aaPredicted RBP13.89□□□□□ -0.19
CSF3R-204ENST00000373104 ARFGEF2Q9Y6D5 1785 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 GOLGA6L7A0A1B0GV03 622 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 FRMD3A2A2Y4 597 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 RASSF10A6NK89 507 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 NKRFO15226 690 aaKnown RBP eCLIP13.89□□□□□ -0.19
CSF3R-204ENST00000373104 CATIPQ7Z7H3 387 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 MYCBPAPQ8TBZ2 947 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 CNOT6LQ96LI5 555 aaKnown RBP13.89□□□□□ -0.19
CSF3R-204ENST00000373104 NUP58Q9BVL2 599 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 SH2D4AQ9H788 454 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 MMRN2Q9H8L6 949 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 BCCIPQ9P287 314 aaKnown RBP eCLIP13.89□□□□□ -0.19
CSF3R-204ENST00000373104 ODF2LQ9ULJ1 636 aa13.89□□□□□ -0.19
CSF3R-204ENST00000373104 PCCAP05165 728 aaPredicted RBP13.88□□□□□ -0.19
CSF3R-204ENST00000373104 KIF11P52732 1056 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 E2F5Q15329 346 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 CCDC178Q5BJE1 867 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 CCDC121Q6ZUS5 278 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 IFT20Q8IY31 132 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 ESR2Q92731 530 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 RNF41Q9H4P4 317 aaPredicted RBP13.88□□□□□ -0.19
CSF3R-204ENST00000373104 THAP9Q9H5L6 903 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 LRP2BPQ9P2M1 347 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 MEGF6O75095 1541 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 SPEF2Q9C093 1822 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 ARHGAP23Q9P227 1491 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 ABCC12Q96J65 1359 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 VEGFAP15692 232 aaPredicted RBP13.88□□□□□ -0.19
CSF3R-204ENST00000373104 EIF4A3P38919 411 aaKnown RBP13.88□□□□□ -0.19
CSF3R-204ENST00000373104 RASGRF1Q13972 1273 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 TRADDQ15628 312 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 PTGISQ16647 500 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 SPATS2Q86XZ4 545 aaKnown RBP13.88□□□□□ -0.19
CSF3R-204ENST00000373104 NOC3LQ8WTT2 800 aaKnown RBP13.88□□□□□ -0.19
CSF3R-204ENST00000373104 PURBQ96QR8 312 aaKnown RBP13.88□□□□□ -0.19
CSF3R-204ENST00000373104 ISCA1Q9BUE6 129 aa13.88□□□□□ -0.19
CSF3R-204ENST00000373104 SOS2Q07890 1332 aaPredicted RBP13.87□□□□□ -0.19
CSF3R-204ENST00000373104 CLGNO14967 610 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 ADAMTS3O15072 1205 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 ELF1P32519 619 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 UBA7P41226 1012 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 MAGEA1P43355 309 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 RASSF7Q02833 373 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 DDR1Q08345 913 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 SF3A3Q12874 501 aaKnown RBP eCLIP13.87□□□□□ -0.192e-6■■■□□ 15.7
CSF3R-204ENST00000373104 HLTFQ14527 1009 aaKnown RBP eCLIP13.87□□□□□ -0.19
CSF3R-204ENST00000373104 TOM1L2Q6ZVM7 507 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 TMC4Q7Z404 712 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 ENAHQ8N8S7 591 aaPredicted RBP13.87□□□□□ -0.19
CSF3R-204ENST00000373104 RASGRP4Q8TDF6 673 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 TTYH3Q9C0H2 523 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 ARHGAP20Q9P2F6 1191 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 CYP2D7A0A087X1C5 515 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 UQCRFS1P1P0C7P4 283 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 MDH1P40925 334 aaKnown RBP13.87□□□□□ -0.19
CSF3R-204ENST00000373104 ODF2Q5BJF6 829 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 KDM7AQ6ZMT4 941 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 ZNF662Q6ZS27 426 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 ZBTB38Q8NAP3 1195 aaPredicted RBP13.87□□□□□ -0.19
CSF3R-204ENST00000373104 VCPKMTQ9H867 229 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 SLC40A1Q9NP59 571 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 SALL4Q9UJQ4 1053 aa13.87□□□□□ -0.19
CSF3R-204ENST00000373104 SPATA31A3Q5VYP0 1347 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 GOLGA6L10A6NI86 522 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 PRPF3O43395 683 aaKnown RBP13.86□□□□□ -0.19
CSF3R-204ENST00000373104 PDHBP11177 359 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 TDRD12Q587J7 1177 aaKnown RBP13.86□□□□□ -0.19
CSF3R-204ENST00000373104 RRAGAQ7L523 313 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 CAVIN3Q969G5 261 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 KRT12Q99456 494 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 PYM1Q9BRP8 204 aaKnown RBP13.86□□□□□ -0.19
CSF3R-204ENST00000373104 DISC1Q9NRI5 854 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 ABCF2Q9UG63 623 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 MYO5AQ9Y4I1 1855 aaKnown RBP13.86□□□□□ -0.19
CSF3R-204ENST00000373104 TMEM94Q12767 1356 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 CSF1RP07333 972 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 CFAP221Q4G0U5 840 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 ANKRD40Q6AI12 368 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 TTI2Q6NXR4 508 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 KIRREL3Q8IZU9 778 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 IQCKQ8N0W5 287 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 DDX17Q92841 729 aaKnown RBP13.86□□□□□ -0.19
CSF3R-204ENST00000373104 VEZTQ9HBM0 779 aa13.86□□□□□ -0.19
CSF3R-204ENST00000373104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.19
CSF3R-204ENST00000373104 PACSIN2Q9UNF0 486 aaPredicted RBP13.86□□□□□ -0.19
CSF3R-204ENST00000373104 SIPA1L3O60292 1781 aaPredicted RBP13.86□□□□□ -0.19
CSF3R-204ENST00000373104 EPHB6O15197 1021 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms