RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 RRP36Q96EU6 259 aaKnown RBP14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 DHTKD1Q96HY7 919 aaPredicted RBP14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 C7orf25Q9BPX7 421 aa14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 UBXN6Q9BZV1 441 aa14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 TRIM9Q9C026 710 aa14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 CPVLQ9H3G5 476 aa14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 GGA1Q9UJY5 639 aa14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 TBC1D8O95759 1140 aa14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 ZNF569Q5MCW4 686 aa14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 SLC35F6Q8N357 371 aa14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 RASSF8Q8NHQ8 419 aa14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 CEP95Q96GE4 821 aa14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 DUSP9Q99956 384 aaKnown RBP14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 TTYH3Q9C0H2 523 aa14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 EPC1Q9H2F5 836 aa14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 RIOX1Q9H6W3 641 aa14.1□□□□□ -0.15
TSPAN6-201ENST00000373020 TTC26A0AVF1 554 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 SMCO2A6NFE2 343 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 FAM182BQ5T319 152 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 JAKMIP3Q5VZ66 844 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 USP17L2Q6R6M4 530 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 CEP112Q8N8E3 955 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 TRIM47Q96LD4 638 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 MMTAG2Q9BU76 263 aaKnown RBP14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 ST7Q9NRC1 585 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 MTMR7Q9Y216 660 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 REXO2Q9Y3B8 237 aaKnown RBP14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 CTAGE9A4FU28 777 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 SEC31AO94979 1220 aaKnown RBP14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 SRGNP10124 158 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 CCNE1P24864 410 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 PPP1R2P41236 205 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 CHMP4BP1P59074 171 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 SLF2Q8IX21 1173 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 TBC1D22AQ8WUA7 517 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 PARD6BQ9BYG5 372 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 CAPN11Q9UMQ6 739 aa14.09□□□□□ -0.15
TSPAN6-201ENST00000373020 CCNT1O60563 726 aaKnown RBP14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 NDUFA10O95299 355 aa14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 ABL1P00519 1130 aa14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 DNM2P50570 870 aa14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 MEA1Q16626 185 aa14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 LETM2Q2VYF4 491 aa14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 MFSD14BQ5SR56 506 aa14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 OR8K1Q8NGG5 319 aa14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 P2RX5Q93086 422 aa14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 PIGSQ96S52 555 aa14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 PLIN2Q99541 437 aa14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 NAPGQ99747 312 aaPredicted RBP14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 LRRC4BQ9NT99 713 aa14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 SEC63Q9UGP8 760 aaKnown RBP14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 USP21Q9UK80 565 aa14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 GREB1LQ9C091 1923 aaPredicted RBP14.08□□□□□ -0.16
TSPAN6-201ENST00000373020 BICDL2A1A5D9 508 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 CCDC151A5D8V7 595 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 SASH3O75995 380 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 SNHG28P0DPA3 235 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 GYS1P13807 737 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 HOXA10P31260 410 aaPredicted RBP14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 AMPD2Q01433 879 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 GABPAQ06546 454 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 ZNF662Q6ZS27 426 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 REXO1Q8N1G1 1221 aaKnown RBP14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 MSANTD4Q8NCY6 345 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 RBM17Q96I25 401 aaKnown RBP14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 CHP1Q99653 195 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 EPN1Q9Y6I3 576 aaPredicted RBP14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 IGKV6D-41A0A0C4DH26 115 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 PDHBP11177 359 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 TUBB4BP68371 445 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 ST5P78524 1137 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 BRD3Q15059 726 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 SOGA3Q5TF21 947 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 WDR59Q6PJI9 974 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 TBC1D16Q8TBP0 767 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 TBCKQ8TEA7 893 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 CCDC47Q96A33 483 aaKnown RBP14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 MTMR9Q96QG7 549 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 SLF1Q9BQI6 1058 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 EXOC1Q9NV70 894 aa14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 ZHX1Q9UKY1 873 aaPredicted RBP14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 LUC7L2Q9Y383 392 aaKnown RBP14.07□□□□□ -0.16
TSPAN6-201ENST00000373020 USP17L5A8MUK1 530 aa14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 BBOX1O75936 387 aa14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 PDE4DQ08499 809 aa14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 WHAMMP3Q1A5X7 153 aa14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 KIF4BQ2VIQ3 1234 aa14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 POTEDQ86YR6 584 aa14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 ZSCAN29Q8IWY8 852 aaPredicted RBP14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 CSGALNACT2Q8N6G5 542 aa14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 ANKZF1Q9H8Y5 726 aa14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 ARFGAP3Q9NP61 516 aa14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 MAGEC2Q9UBF1 373 aaPredicted RBP14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 POLLQ9UGP5 575 aa14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 RAB21Q9UL25 225 aa14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 DAGLAQ9Y4D2 1042 aa14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 POTEB2H3BUK9 544 aa14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 SERPINB2P05120 415 aa14.06□□□□□ -0.16
TSPAN6-201ENST00000373020 FXR2P51116 673 aaKnown RBP eCLIP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms