RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 SKIDA1Q1XH10 827 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 LARP1BQ659C4 914 aaKnown RBP9.89□□□□□ -0.83
ATG4A-203ENST00000372232 LYPD8Q6UX82 237 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 NLRP10Q86W26 655 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 CEP57Q86XR8 500 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 B4GALNT2Q8NHY0 566 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 SLC39A2Q9NP94 309 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 RGL1Q9NZL6 768 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 TLDC2A0PJX2 215 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 VPS37CA5D8V6 355 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-203ENST00000372232 RNF113AO15541 343 aaKnown RBP9.89□□□□□ -0.83
ATG4A-203ENST00000372232 CUTAO60888 179 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 PDCP20941 246 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 PPFIA1Q13136 1202 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 IFIT5Q13325 482 aaKnown RBP9.89□□□□□ -0.83
ATG4A-203ENST00000372232 SF3B2Q13435 895 aaKnown RBP9.89□□□□□ -0.83
ATG4A-203ENST00000372232 PUS10Q3MIT2 529 aaKnown RBP9.89□□□□□ -0.83
ATG4A-203ENST00000372232 THEMIS2Q5TEJ8 643 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 CAPRIN2Q6IMN6 1127 aaKnown RBP9.89□□□□□ -0.83
ATG4A-203ENST00000372232 MIS18BP1Q6P0N0 1132 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 TMC6Q7Z403 805 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 CCDC85AQ96PX6 553 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-203ENST00000372232 WDR24Q96S15 920 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 DSCC1Q9BVC3 393 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 SCAND2PQ9GZW5 306 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-203ENST00000372232 RANBP17Q9H2T7 1088 aaKnown RBP9.89□□□□□ -0.83
ATG4A-203ENST00000372232 SLC40A1Q9NP59 571 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 RTEL1Q9NZ71 1219 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.89□□□□□ -0.83
ATG4A-203ENST00000372232 ERICH2A1L162 156 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 SPDYE3A6NKU9 549 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 NR1I2O75469 434 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 ADORA1P30542 326 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 SLC30A9Q6PML9 568 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 SYNE4Q8N205 404 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 DHX58Q96C10 678 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 SETDB2Q96T68 719 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 LZTS2Q9BRK4 669 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 PCDHGC5Q9Y5F6 944 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 ZEB2O60315 1214 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 SMNDC1O75940 238 aaKnown RBP eCLIP9.88□□□□□ -0.83
ATG4A-203ENST00000372232 CFHP08603 1231 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 HSPD1P10809 573 aaKnown RBP9.88□□□□□ -0.83
ATG4A-203ENST00000372232 GCLCP48506 637 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-203ENST00000372232 CDR1P51861 262 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 GNG11P61952 73 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 DRP2Q13474 957 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 CCDC178Q5BJE1 867 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 Q6ZUG5 572 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 STOX1Q6ZVD7 989 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 MICALCLQ6ZW33 695 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 SDCCAG8Q86SQ7 713 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-203ENST00000372232 SIX5Q8N196 739 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 LARGE2Q8N3Y3 721 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 TPCN2Q8NHX9 752 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 FAM76AQ8TAV0 307 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 FAM81AQ8TBF8 368 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 VTI1AQ96AJ9 217 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 TSGA10Q9BZW7 698 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 RMI1Q9H9A7 625 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 PARP2Q9UGN5 583 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 CORO1CQ9ULV4 474 aaPredicted RBP9.88□□□□□ -0.83
ATG4A-203ENST00000372232 ZBTB1Q9Y2K1 713 aa9.88□□□□□ -0.83
ATG4A-203ENST00000372232 COL14A1Q05707 1796 aaKnown RBP9.88□□□□□ -0.83
ATG4A-203ENST00000372232 MAST3O60307 1309 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 GOLGA6L4A6NEF3 574 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 WDHD1O75717 1129 aaPredicted RBP9.87□□□□□ -0.83
ATG4A-203ENST00000372232 PDHBP11177 359 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 POLD1P28340 1107 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 TPP2P29144 1249 aaPredicted RBP9.87□□□□□ -0.83
ATG4A-203ENST00000372232 SEC13P55735 322 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 VSNL1P62760 191 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 ROR2Q01974 943 aaKnown RBP9.87□□□□□ -0.83
ATG4A-203ENST00000372232 STK3Q13188 491 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 RASA3Q14644 834 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 TTC39AQ5SRH9 613 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 TTLL11Q8NHH1 800 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 A6NNZ2 444 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 ITGA6P23229 1130 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 RANBP1P43487 201 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 TUBB8Q3ZCM7 444 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 CCDC102BQ68D86 513 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 CDC37L1Q7L3B6 337 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 DHX32Q7L7V1 743 aaKnown RBP9.87□□□□□ -0.83
ATG4A-203ENST00000372232 ARHGAP22Q7Z5H3 698 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 CCDC13Q8IYE1 715 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 ATL2Q8NHH9 583 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 ALS2CR12Q96Q35 445 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 CAPS2Q9BXY5 557 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 GREM2Q9H772 168 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 CUEDC1Q9NWM3 386 aaPredicted RBP9.87□□□□□ -0.83
ATG4A-203ENST00000372232 PPP2R2CQ9Y2T4 447 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 RIPOR2Q9Y4F9 1068 aa9.87□□□□□ -0.83
ATG4A-203ENST00000372232 ERVV-1B6SEH8 477 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 LIN7AO14910 233 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-203ENST00000372232 MYL1P05976 194 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 IBSPP21815 317 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-203ENST00000372232 IL6STP40189 918 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-203ENST00000372232 CTSWP56202 376 aa9.86□□□□□ -0.83
ATG4A-203ENST00000372232 TUBB2AQ13885 445 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms