RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 SMIM22K7EJ46 135 aa16.05■□□□□ 0.16
LDB3-204ENST00000372066 ENTPD3O75355 529 aa16.05■□□□□ 0.16
LDB3-204ENST00000372066 PLEKHA8P1O95397 391 aa16.05■□□□□ 0.16
LDB3-204ENST00000372066 CYP2D6P10635 497 aa16.05■□□□□ 0.16
LDB3-204ENST00000372066 DHX8Q14562 1220 aaKnown RBP16.05■□□□□ 0.16
LDB3-204ENST00000372066 DHX40Q8IX18 779 aaKnown RBP16.05■□□□□ 0.16
LDB3-204ENST00000372066 NAP1L5Q96NT1 182 aaPredicted RBP16.05■□□□□ 0.16
LDB3-204ENST00000372066 SH3GLB2Q9NR46 395 aa16.05■□□□□ 0.16
LDB3-204ENST00000372066 FBXO2Q9UK22 296 aaPredicted RBP16.05■□□□□ 0.16
LDB3-204ENST00000372066 KCNH3Q9ULD8 1083 aa16.05■□□□□ 0.16
LDB3-204ENST00000372066 SRPRBQ9Y5M8 271 aaKnown RBP16.05■□□□□ 0.16
LDB3-204ENST00000372066 TRIM75PA6NK02 468 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 PHF20L1A8MW92 1017 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 IKBKBO14920 756 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 CYP2C8P10632 490 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 OSBPP22059 807 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 CALML3P27482 149 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 TRAPPC10P48553 1259 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 RCSD1Q6JBY9 416 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 GPAT2Q6NUI2 795 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 KANK3Q6NY19 840 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 CCDC82Q8N4S0 544 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 PARK7Q99497 189 aaKnown RBP16.04■□□□□ 0.16
LDB3-204ENST00000372066 MKNK2Q9HBH9 465 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 V9GY48 417 aaPredicted RBP16.04■□□□□ 0.16
LDB3-204ENST00000372066 NEMFO60524 1076 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 TPM2P07951 284 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 SCG2P13521 617 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 BTDP43251 543 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 TFAP4Q01664 338 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 NR5A1Q13285 461 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 GRM4Q14833 912 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 MTFR1Q15390 333 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 PFKFB3Q16875 520 aaPredicted RBP16.04■□□□□ 0.16
LDB3-204ENST00000372066 FAM47AQ5JRC9 791 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 KRBA2Q6ZNG9 492 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 SH3BP5LQ7L8J4 393 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 FASTKD5Q7L8L6 764 aaKnown RBP16.04■□□□□ 0.16
LDB3-204ENST00000372066 SCYL3Q8IZE3 742 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 ZNF444Q8N0Y2 327 aaPredicted RBP16.04■□□□□ 0.16
LDB3-204ENST00000372066 CMTR1Q8N1G2 835 aaKnown RBP16.04■□□□□ 0.16
LDB3-204ENST00000372066 FERMT2Q96AC1 680 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 LZTS2Q9BRK4 669 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 SPTLC3Q9NUV7 552 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 VPS54Q9P1Q0 977 aa16.04■□□□□ 0.16
LDB3-204ENST00000372066 BIN2Q9UBW5 565 aaPredicted RBP16.04■□□□□ 0.16
LDB3-204ENST00000372066 ADGRA2Q96PE1 1338 aa16.03■□□□□ 0.16
LDB3-204ENST00000372066 PTPRAP18433 802 aa16.03■□□□□ 0.16
LDB3-204ENST00000372066 GRK4P32298 578 aa16.03■□□□□ 0.16
LDB3-204ENST00000372066 PICALMQ13492 652 aa16.03■□□□□ 0.16
LDB3-204ENST00000372066 GADL1Q6ZQY3 521 aa16.03■□□□□ 0.16
LDB3-204ENST00000372066 DRC7Q8IY82 874 aa16.03■□□□□ 0.16
LDB3-204ENST00000372066 SRBD1Q8N5C6 995 aaKnown RBP16.03■□□□□ 0.16
LDB3-204ENST00000372066 AOPEPQ8N6M6 819 aa16.03■□□□□ 0.16
LDB3-204ENST00000372066 CNNM3Q8NE01 707 aa16.03■□□□□ 0.16
LDB3-204ENST00000372066 TTC12Q9H892 705 aaPredicted RBP16.03■□□□□ 0.16
LDB3-204ENST00000372066 MYPNQ86TC9 1320 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 DDTLA6NHG4 134 aaPredicted RBP16.02■□□□□ 0.16
LDB3-204ENST00000372066 TSPY3P0CV98 308 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 TSPY8P0CW00 308 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 FCGRTP55899 365 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 GALNT17Q6IS24 598 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 C16orf86Q6ZW13 317 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 TEX11Q8IYF3 940 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 SPC24Q8NBT2 197 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 PNMA1Q8ND90 353 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 TGFBRAP1Q8WUH2 860 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 TNFRSF25Q93038 417 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 PYM1Q9BRP8 204 aaKnown RBP16.02■□□□□ 0.16
LDB3-204ENST00000372066 CABP5Q9NP86 173 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 DDX4Q9NQI0 724 aaKnown RBP16.02■□□□□ 0.16
LDB3-204ENST00000372066 CLIP2Q9UDT6 1046 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 AFG3L2Q9Y4W6 797 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 PCDHB6Q9Y5E3 794 aa16.02■□□□□ 0.16
LDB3-204ENST00000372066 A0A0G2JLL6 359 aaPredicted RBP16.01■□□□□ 0.15
LDB3-204ENST00000372066 SLURP2P0DP57 97 aa16.01■□□□□ 0.15
LDB3-204ENST00000372066 BCRP11274 1271 aa16.01■□□□□ 0.15
LDB3-204ENST00000372066 MAP3K10Q02779 954 aa16.01■□□□□ 0.15
LDB3-204ENST00000372066 DPCR1Q3MIW9 517 aa16.01■□□□□ 0.15
LDB3-204ENST00000372066 PRRT2Q7Z6L0 340 aaPredicted RBP16.01■□□□□ 0.15
LDB3-204ENST00000372066 TRIML1Q8N9V2 468 aa16.01■□□□□ 0.15
LDB3-204ENST00000372066 OXER1Q8TDS5 423 aa16.01■□□□□ 0.15
LDB3-204ENST00000372066 CLIC6Q96NY7 704 aa16.01■□□□□ 0.15
LDB3-204ENST00000372066 ATRNL1Q5VV63 1379 aa16.01■□□□□ 0.15
LDB3-204ENST00000372066 NMT2O60551 498 aa16■□□□□ 0.15
LDB3-204ENST00000372066 CTNND1O60716 968 aaKnown RBP16■□□□□ 0.15
LDB3-204ENST00000372066 PRKCZQ05513 592 aa16■□□□□ 0.15
LDB3-204ENST00000372066 NOLC1Q14978 699 aaKnown RBP eCLIP16■□□□□ 0.15
LDB3-204ENST00000372066 CCDC148Q8NFR7 591 aa16■□□□□ 0.15
LDB3-204ENST00000372066 KIAA1524Q8TCG1 905 aa16■□□□□ 0.15
LDB3-204ENST00000372066 IL17RBQ9NRM6 502 aa16■□□□□ 0.15
LDB3-204ENST00000372066 DACH1Q9UI36 760 aa16■□□□□ 0.15
LDB3-204ENST00000372066 COLQQ9Y215 455 aaPredicted RBP16■□□□□ 0.15
LDB3-204ENST00000372066 PLIN4Q96Q06 1357 aa16■□□□□ 0.15
LDB3-204ENST00000372066 FLT1P17948 1338 aa16■□□□□ 0.15
LDB3-204ENST00000372066 H0YGN5 161 aa16■□□□□ 0.15
LDB3-204ENST00000372066 CCL5P13501 91 aa16■□□□□ 0.15
LDB3-204ENST00000372066 RASA1P20936 1047 aa16■□□□□ 0.15
LDB3-204ENST00000372066 NLRP5P59047 1200 aa16■□□□□ 0.15
LDB3-204ENST00000372066 UBXN2AP68543 259 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms