RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 RTEL1Q9NZ71 1219 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 RCOR1Q9UKL0 485 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 PCDHB6Q9Y5E3 794 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 TLL2Q9Y6L7 1015 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 SPDYE16A6NNV3 312 aaPredicted RBP12.47□□□□□ -0.41
LCN1-202ENST00000371781 MEIS2O14770 477 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 XBP1P17861 261 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 CALML3P27482 149 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 SAFBQ15424 915 aaKnown RBP eCLIP12.47□□□□□ -0.41
LCN1-202ENST00000371781 SF3A1Q15459 793 aaKnown RBP12.47□□□□□ -0.41
LCN1-202ENST00000371781 ANO1Q5XXA6 986 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 GPAT2Q6NUI2 795 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 SAMD1Q6SPF0 538 aaPredicted RBP12.47□□□□□ -0.41
LCN1-202ENST00000371781 CATSPERGQ6ZRH7 1159 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 FBXO11Q86XK2 927 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 CHURC1Q8WUH1 139 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 CLEC4DQ8WXI8 215 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 TBC1D5Q92609 795 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 AGBL1Q96MI9 1066 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 AMNQ9BXJ7 453 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 RIC8AQ9NPQ8 531 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.47□□□□□ -0.41
LCN1-202ENST00000371781 ADAMTS5Q9UNA0 930 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 PCDHA1Q9Y5I3 950 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 ATP6V1DQ9Y5K8 247 aa12.47□□□□□ -0.41
LCN1-202ENST00000371781 CCDC85CA6NKD9 419 aa12.46□□□□□ -0.41
LCN1-202ENST00000371781 FLOT1O75955 427 aa12.46□□□□□ -0.41
LCN1-202ENST00000371781 YEATS4O95619 227 aa12.46□□□□□ -0.41
LCN1-202ENST00000371781 DSG3P32926 999 aa12.46□□□□□ -0.41
LCN1-202ENST00000371781 ADCY7P51828 1080 aa12.46□□□□□ -0.41
LCN1-202ENST00000371781 GRIN1Q05586 938 aa12.46□□□□□ -0.41
LCN1-202ENST00000371781 JAKMIP3Q5VZ66 844 aa12.46□□□□□ -0.41
LCN1-202ENST00000371781 GALNT17Q6IS24 598 aa12.46□□□□□ -0.41
LCN1-202ENST00000371781 BEGAINQ9BUH8 593 aa12.46□□□□□ -0.41
LCN1-202ENST00000371781 BIN2Q9UBW5 565 aaPredicted RBP12.46□□□□□ -0.41
LCN1-202ENST00000371781 USP17L15C9J2P7 530 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 USP17L13C9JLJ4 530 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 USP17L11C9JVI0 530 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 USP17L18D6R9N7 530 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 USP17L22D6RA61 530 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 USP17L17D6RBQ6 530 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 USP17L19D6RCP7 530 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 USP17L20D6RJB6 530 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 VWA5AO00534 786 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 NFIBO00712 420 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 CXCL11O14625 94 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 CNMDO75829 334 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 SLC34A2O95436 690 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 ICAM1P05362 532 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 FKBP1BP68106 108 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 USP17L24Q0WX57 530 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 INF2Q27J81 1249 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 MUM1L1Q5H9M0 696 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 AXDND1Q5T1B0 1012 aaPredicted RBP12.45□□□□□ -0.42
LCN1-202ENST00000371781 USP17L6PQ6QN14 398 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 REXO1Q8N1G1 1221 aaKnown RBP12.45□□□□□ -0.42
LCN1-202ENST00000371781 PRPF38AQ8NAV1 312 aaKnown RBP12.45□□□□□ -0.42
LCN1-202ENST00000371781 CCDC12Q8WUD4 166 aaPredicted RBP12.45□□□□□ -0.42
LCN1-202ENST00000371781 CRYGNQ8WXF5 182 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 MS4A4AQ96JQ5 239 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 SPATA32Q96LK8 384 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 ZNF396Q96N95 335 aaPredicted RBP12.45□□□□□ -0.42
LCN1-202ENST00000371781 R3HDMLQ9H3Y0 253 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 GOLPH3LQ9H4A5 285 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 RAVER2Q9HCJ3 691 aaKnown RBP12.45□□□□□ -0.42
LCN1-202ENST00000371781 C6orf50Q9HD87 102 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 ZNF214Q9UL59 606 aaPredicted RBP12.45□□□□□ -0.42
LCN1-202ENST00000371781 RIPK3Q9Y572 518 aa12.45□□□□□ -0.42
LCN1-202ENST00000371781 MYPNQ86TC9 1320 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 TRAK2O60296 914 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 LIG1P18858 919 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 ATP2B1P20020 1258 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 GHRHRQ02643 423 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 GNL2Q13823 731 aaKnown RBP12.44□□□□□ -0.42
LCN1-202ENST00000371781 TMEM132BQ14DG7 1078 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 SLC39A14Q15043 492 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 TTC38Q5R3I4 469 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 ATL3Q6DD88 541 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 GADL1Q6ZQY3 521 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 SAPCD2Q86UD0 394 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 C4orf32Q8N8J7 132 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 PROCA1Q8NCQ7 364 aaPredicted RBP12.44□□□□□ -0.42
LCN1-202ENST00000371781 BRI3BPQ8WY22 251 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 SCAND2PQ9GZW5 306 aaPredicted RBP12.44□□□□□ -0.42
LCN1-202ENST00000371781 TMEM60Q9H2L4 133 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 BRMS1Q9HCU9 246 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 TMOD4Q9NZQ9 345 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 COL20A1Q9P218 1284 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 FBXO2Q9UK22 296 aaPredicted RBP12.44□□□□□ -0.42
LCN1-202ENST00000371781 PCDHA7Q9UN72 937 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 AGTPBP1Q9UPW5 1226 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 LRRC37A2A6NM11 1700 aa12.44□□□□□ -0.42
LCN1-202ENST00000371781 ABCB11O95342 1321 aa12.43□□□□□ -0.42
LCN1-202ENST00000371781 UNCXA6NJT0 531 aa12.43□□□□□ -0.42
LCN1-202ENST00000371781 GNA11P29992 359 aa12.43□□□□□ -0.42
LCN1-202ENST00000371781 HOXA7P31268 230 aaPredicted RBP12.43□□□□□ -0.42
LCN1-202ENST00000371781 HOXA13P31271 388 aaPredicted RBP12.43□□□□□ -0.42
LCN1-202ENST00000371781 MAP2K2P36507 400 aa12.43□□□□□ -0.42
LCN1-202ENST00000371781 MKRN3Q13064 507 aaKnown RBP12.43□□□□□ -0.42
LCN1-202ENST00000371781 RILPL1Q5EBL4 403 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms