RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 C6orf50Q9HD87 102 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 ZNRF3Q9ULT6 936 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 PSME4Q14997 1843 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 FRMPD2Q68DX3 1309 aaPredicted RBP11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 KIF13BQ9NQT8 1826 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 hCG_1984214I3L0E3 225 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 DALRD3Q5D0E6 543 aaKnown RBP11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 SRLQ86TD4 932 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 PACS2Q86VP3 889 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 PDILTQ8N807 584 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 ZNF713Q8N859 430 aaPredicted RBP11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 CSRNP2Q9H175 543 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 KANSL2Q9H9L4 492 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 SNHG28P0DPA3 235 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 GPATCH4Q5T3I0 446 aaKnown RBP11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 TYW1BQ6NUM6 668 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 SH3BP5LQ7L8J4 393 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 CLEC10AQ8IUN9 316 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 PIGSQ96S52 555 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 SRRTQ9BXP5 876 aaKnown RBP11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 GPCPD1Q9NPB8 672 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 GRIN1Q05586 938 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 PTGDRQ13258 359 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 CCDC96Q2M329 555 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 LONRF3Q496Y0 759 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 ELOA2Q8IYF1 753 aaPredicted RBP11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 ZMYND12Q9H0C1 365 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 DNAJC18Q9H819 358 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 SMCO2A6NFE2 343 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 FAM196BA6NMK8 535 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 PES1O00541 588 aaKnown RBP11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 LMOD1P29536 600 aaPredicted RBP11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 MCM7P33993 719 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 ATP2C1P98194 919 aaPredicted RBP11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 ZNF543Q08ER8 600 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 KANK3Q6NY19 840 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 FAM212AQ96EL1 285 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 PPP1R1BQ9UD71 204 aaPredicted RBP11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 PCDHA6Q9UN73 950 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 PCDHA8Q9Y5H6 950 aa11.25□□□□□ -0.61
PRPF38B-203ENST00000370025 POLR2DO15514 142 aaKnown RBP11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 NLRP12P59046 1061 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 TATDN1Q6P1N9 297 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 TMEM179Q6ZVK1 233 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 GMLQ99445 158 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 XPO4Q9C0E2 1151 aaKnown RBP11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 NYAP2Q9P242 653 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 ATRNL1Q5VV63 1379 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 MYH4Q9Y623 1939 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 IQCB1Q15051 598 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 KRT25Q7Z3Z0 450 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 AGBL3Q8NEM8 1001 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 RASGRP4Q8TDF6 673 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 JDP2Q8WYK2 163 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 SUGCTQ9HAC7 445 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 M0R2N6 131 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 TBC1D8O95759 1140 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 SLURP2P0DP57 97 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 ABCB5Q2M3G0 1257 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 MKL1Q969V6 931 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 CSRNP1Q96S65 589 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 DEF6Q9H4E7 631 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 ARFGAP3Q9NP61 516 aa11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 ZBTB12Q9Y330 459 aaPredicted RBP11.24□□□□□ -0.61
PRPF38B-203ENST00000370025 COL2A1P02458 1487 aaPredicted RBP11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 TCP10L2B9ZVM9 353 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 H3BQF6 201 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 WNT7AO00755 349 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 RAD21O60216 631 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 N4BP1O75113 896 aaKnown RBP11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 EEF2P13639 858 aaKnown RBP11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 RBM26Q5T8P6 1007 aaKnown RBP11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 METTL16Q86W50 562 aaKnown RBP11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 TAOK3Q9H2K8 898 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 ZNF70Q9UC06 446 aaPredicted RBP11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 TUBE1Q9UJT0 475 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 GREB1LQ9C091 1923 aaPredicted RBP11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 ESYT2A0FGR8 921 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 VWA3AA6NCI4 1184 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 ADAMTS3O15072 1205 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 PNOCQ13519 176 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 ARL6IP4Q66PJ3 421 aaKnown RBP11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 ARMCX5Q6P1M9 558 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 CCDC102AQ96A19 550 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 PDE11AQ9HCR9 933 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 SERTAD1Q9UHV2 236 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 HERC5Q9UII4 1024 aaKnown RBP11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 SIPA1L1O43166 1804 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 CLRN2A0PK11 232 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 GNG11P61952 73 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 ICA1Q05084 483 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 NONOQ15233 471 aaKnown RBP eCLIP11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 REXO1L1PQ8IX06 675 aa11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 RNF216Q9NWF9 866 aaPredicted RBP11.23□□□□□ -0.61
PRPF38B-203ENST00000370025 PNMA6FA0A0J9YX94 578 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 MYO1BO43795 1136 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 NRDCO43847 1150 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms