RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 PLA2G6O60733 806 aa19.14■□□□□ 0.65
PHGDH-202ENST00000369409 LETM2Q2VYF4 491 aa19.14■□□□□ 0.65
PHGDH-202ENST00000369409 FAM13BQ9NYF5 915 aa19.14■□□□□ 0.65
PHGDH-202ENST00000369409 PTPRFP10586 1907 aa19.13■□□□□ 0.65
PHGDH-202ENST00000369409 VWA3AA6NCI4 1184 aa19.13■□□□□ 0.65
PHGDH-202ENST00000369409 XRCC6P12956 609 aaKnown RBP eCLIP19.13■□□□□ 0.655e-6■■□□□ 11.5
PHGDH-202ENST00000369409 PTPRAP18433 802 aa19.13■□□□□ 0.65
PHGDH-202ENST00000369409 CCDC174Q6PII3 467 aa19.13■□□□□ 0.65
PHGDH-202ENST00000369409 USP50Q70EL3 339 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-202ENST00000369409 KRT26Q7Z3Y9 468 aa19.13■□□□□ 0.65
PHGDH-202ENST00000369409 RANBP17Q9H2T7 1088 aaKnown RBP19.13■□□□□ 0.65
PHGDH-202ENST00000369409 AS3MTQ9HBK9 375 aa19.13■□□□□ 0.65
PHGDH-202ENST00000369409 KCNH3Q9ULD8 1083 aa19.13■□□□□ 0.65
PHGDH-202ENST00000369409 RBBP6Q7Z6E9 1792 aaKnown RBP19.12■□□□□ 0.65
PHGDH-202ENST00000369409 CCNT1O60563 726 aaKnown RBP19.12■□□□□ 0.65
PHGDH-202ENST00000369409 CCDC192P0DO97 292 aa19.12■□□□□ 0.65
PHGDH-202ENST00000369409 SPP2Q13103 211 aa19.12■□□□□ 0.65
PHGDH-202ENST00000369409 C4orf32Q8N8J7 132 aa19.12■□□□□ 0.65
PHGDH-202ENST00000369409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.12■□□□□ 0.652e-7■■□□□ 13.6
PHGDH-202ENST00000369409 SDF4Q9BRK5 362 aa19.12■□□□□ 0.65
PHGDH-202ENST00000369409 WDR18Q9BV38 432 aa19.12■□□□□ 0.65
PHGDH-202ENST00000369409 GLT8D2Q9H1C3 349 aa19.12■□□□□ 0.65
PHGDH-202ENST00000369409 USP17L15C9J2P7 530 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 USP17L13C9JLJ4 530 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 USP17L11C9JVI0 530 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 USP17L18D6R9N7 530 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 USP17L22D6RA61 530 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 USP17L17D6RBQ6 530 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 USP17L19D6RCP7 530 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 USP17L20D6RJB6 530 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 USP14P54578 494 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 TYRO3Q06418 890 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 USP17L24Q0WX57 530 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 USP17L6PQ6QN14 398 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 USP49Q70CQ1 688 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 RNF214Q8ND24 703 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 TMEM60Q9H2L4 133 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 VCAM1P19320 739 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 NOL9Q5SY16 702 aaKnown RBP19.11■□□□□ 0.65
PHGDH-202ENST00000369409 ARL6IP4Q66PJ3 421 aaKnown RBP19.11■□□□□ 0.65
PHGDH-202ENST00000369409 ZNF280CQ8ND82 737 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 TANGO6Q9C0B7 1094 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 EMILIN3Q9NT22 766 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 ZHX2Q9Y6X8 837 aa19.11■□□□□ 0.65
PHGDH-202ENST00000369409 COL11A1P12107 1806 aaPredicted RBP19.11■□□□□ 0.65
PHGDH-202ENST00000369409 USP2O75604 605 aaPredicted RBP19.1■□□□□ 0.65
PHGDH-202ENST00000369409 BACE1P56817 501 aa19.1■□□□□ 0.65
PHGDH-202ENST00000369409 IL17AQ16552 155 aa19.1■□□□□ 0.65
PHGDH-202ENST00000369409 SYMPKQ92797 1274 aaKnown RBP19.1■□□□□ 0.65
PHGDH-202ENST00000369409 ERCC4Q92889 916 aaPredicted RBP19.1■□□□□ 0.65
PHGDH-202ENST00000369409 TIGD1Q96MW7 591 aa19.1■□□□□ 0.65
PHGDH-202ENST00000369409 SLF1Q9BQI6 1058 aa19.1■□□□□ 0.65
PHGDH-202ENST00000369409 PANK2Q9BZ23 570 aa19.1■□□□□ 0.65
PHGDH-202ENST00000369409 RLFQ13129 1914 aa19.1■□□□□ 0.65
PHGDH-202ENST00000369409 NEMFO60524 1076 aa19.09■□□□□ 0.65
PHGDH-202ENST00000369409 EAPPQ56P03 285 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-202ENST00000369409 SASS6Q6UVJ0 657 aa19.09■□□□□ 0.65
PHGDH-202ENST00000369409 EPSTI1Q96J88 318 aa19.09■□□□□ 0.65
PHGDH-202ENST00000369409 MEIS2O14770 477 aa19.09■□□□□ 0.65
PHGDH-202ENST00000369409 OPLAHO14841 1288 aa19.09■□□□□ 0.65
PHGDH-202ENST00000369409 ZC3H15Q8WU90 426 aaKnown RBP19.09■□□□□ 0.65
PHGDH-202ENST00000369409 ANO3Q9BYT9 981 aa19.09■□□□□ 0.65
PHGDH-202ENST00000369409 TAF1DQ9H5J8 278 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-202ENST00000369409 RPAP3Q9H6T3 665 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-202ENST00000369409 LAD1O00515 517 aa19.08■□□□□ 0.65
PHGDH-202ENST00000369409 POLR2DO15514 142 aaKnown RBP19.08■□□□□ 0.65
PHGDH-202ENST00000369409 TDP2O95551 362 aa19.08■□□□□ 0.65
PHGDH-202ENST00000369409 TRAF1Q13077 416 aa19.08■□□□□ 0.65
PHGDH-202ENST00000369409 AP3B2Q13367 1082 aa19.08■□□□□ 0.65
PHGDH-202ENST00000369409 ORC2Q13416 577 aaPredicted RBP19.08■□□□□ 0.65
PHGDH-202ENST00000369409 VGLL4Q14135 290 aa19.08■□□□□ 0.65
PHGDH-202ENST00000369409 LONRF3Q496Y0 759 aa19.08■□□□□ 0.65
PHGDH-202ENST00000369409 POTEDQ86YR6 584 aa19.08■□□□□ 0.65
PHGDH-202ENST00000369409 PDILTQ8N807 584 aa19.08■□□□□ 0.65
PHGDH-202ENST00000369409 CDCA5Q96FF9 252 aa19.08■□□□□ 0.65
PHGDH-202ENST00000369409 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.08■□□□□ 0.65
PHGDH-202ENST00000369409 SNCAIPQ9Y6H5 919 aa19.08■□□□□ 0.65
PHGDH-202ENST00000369409 IQCA1LA6NCM1 817 aa19.07■□□□□ 0.64
PHGDH-202ENST00000369409 EDIL3O43854 480 aa19.07■□□□□ 0.64
PHGDH-202ENST00000369409 PPP1R12BO60237 982 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-202ENST00000369409 FLOT1O75955 427 aa19.07■□□□□ 0.64
PHGDH-202ENST00000369409 OR52Z1P0C646 297 aa19.07■□□□□ 0.64
PHGDH-202ENST00000369409 HMGCS2P54868 508 aa19.07■□□□□ 0.64
PHGDH-202ENST00000369409 KRBA2Q6ZNG9 492 aa19.07■□□□□ 0.64
PHGDH-202ENST00000369409 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-202ENST00000369409 PRPF38AQ8NAV1 312 aaKnown RBP19.07■□□□□ 0.64
PHGDH-202ENST00000369409 CNNM3Q8NE01 707 aa19.07■□□□□ 0.64
PHGDH-202ENST00000369409 A0A087X0B3 334 aa19.07■□□□□ 0.64
PHGDH-202ENST00000369409 PRPHP41219 470 aa19.07■□□□□ 0.64
PHGDH-202ENST00000369409 DTHD1Q6ZMT9 781 aa19.07■□□□□ 0.64
PHGDH-202ENST00000369409 P2RX7Q99572 595 aaKnown RBP19.07■□□□□ 0.64
PHGDH-202ENST00000369409 SLC37A4O43826 429 aa19.06■□□□□ 0.64
PHGDH-202ENST00000369409 LONP1P36776 959 aaKnown RBP19.06■□□□□ 0.64
PHGDH-202ENST00000369409 MAP3K9P80192 1104 aa19.06■□□□□ 0.64
PHGDH-202ENST00000369409 LDHDQ86WU2 507 aa19.06■□□□□ 0.64
PHGDH-202ENST00000369409 SERTAD1Q9UHV2 236 aa19.06■□□□□ 0.64
PHGDH-202ENST00000369409 LOC285556D6RIA3 1793 aa19.05■□□□□ 0.64
PHGDH-202ENST00000369409 ZNF536O15090 1300 aa19.05■□□□□ 0.64
PHGDH-202ENST00000369409 ABCB11O95342 1321 aa19.05■□□□□ 0.64
PHGDH-202ENST00000369409 POTECB2RU33 542 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms