RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 RNF187Q5TA31 235 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-201ENST00000369407 RPGRIP1Q96KN7 1286 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 IFIH1Q9BYX4 1025 aaKnown RBP13.69□□□□□ -0.22
PHGDH-201ENST00000369407 RBM12Q9NTZ6 932 aaKnown RBP13.69□□□□□ -0.22
PHGDH-201ENST00000369407 FAM205AQ6ZU69 1335 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 BCL9LQ86UU0 1499 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 NUTM2BA6NNL0 878 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-201ENST00000369407 NUTM2EB1AL46 878 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-201ENST00000369407 HSF2BPO75031 334 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 SRGNP10124 158 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 FCER1AP12319 257 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 SLC5A1P13866 664 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 TROAPQ12815 778 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 NNTQ13423 1086 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 MEA1Q16626 185 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 HAUS3Q68CZ6 603 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 ANKRD40Q6AI12 368 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 CNOT6LQ96LI5 555 aaKnown RBP13.69□□□□□ -0.22
PHGDH-201ENST00000369407 RNPC3Q96LT9 517 aaKnown RBP13.69□□□□□ -0.22
PHGDH-201ENST00000369407 CCDC43Q96MW1 224 aaKnown RBP13.69□□□□□ -0.22
PHGDH-201ENST00000369407 OSBPL9Q96SU4 736 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 DUSP9Q99956 384 aaKnown RBP13.69□□□□□ -0.22
PHGDH-201ENST00000369407 NOC4LQ9BVI4 516 aaKnown RBP13.69□□□□□ -0.22
PHGDH-201ENST00000369407 TMEM60Q9H2L4 133 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 CENPHQ9H3R5 247 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 NFU1Q9UMS0 254 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 LRP6O75581 1613 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 PSMA7O14818 248 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 CARSP49589 748 aaKnown RBP13.69□□□□□ -0.22
PHGDH-201ENST00000369407 DNM2P50570 870 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 VAV2P52735 878 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 GIGYF2Q6Y7W6 1299 aaKnown RBP13.69□□□□□ -0.22
PHGDH-201ENST00000369407 AMOTL1Q8IY63 956 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 OTUD6BQ8N6M0 293 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 PROCA1Q8NCQ7 364 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-201ENST00000369407 SH3GL2Q99962 352 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 TTYH3Q9C0H2 523 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 SLC24A3Q9HC58 644 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 CD248Q9HCU0 757 aa13.69□□□□□ -0.22
PHGDH-201ENST00000369407 NID2Q14112 1375 aa13.68□□□□□ -0.22
PHGDH-201ENST00000369407 NUP188Q5SRE5 1749 aa13.68□□□□□ -0.22
PHGDH-201ENST00000369407 BMP15O95972 392 aa13.68□□□□□ -0.22
PHGDH-201ENST00000369407 FGFR2P21802 821 aa13.68□□□□□ -0.22
PHGDH-201ENST00000369407 ATP6V1AP38606 617 aa13.68□□□□□ -0.22
PHGDH-201ENST00000369407 TRIM28Q13263 835 aaKnown RBP13.68□□□□□ -0.22
PHGDH-201ENST00000369407 TTI2Q6NXR4 508 aa13.68□□□□□ -0.22
PHGDH-201ENST00000369407 DISC1Q9NRI5 854 aa13.68□□□□□ -0.22
PHGDH-201ENST00000369407 PCDHA13Q9Y5I0 950 aa13.68□□□□□ -0.22
PHGDH-201ENST00000369407 A0A1W2PQC6 194 aa13.68□□□□□ -0.22
PHGDH-201ENST00000369407 GOLGA8KD6RF30 607 aa13.68□□□□□ -0.22
PHGDH-201ENST00000369407 EIF4A3P38919 411 aaKnown RBP13.68□□□□□ -0.22
PHGDH-201ENST00000369407 ARHGAP20Q9P2F6 1191 aa13.68□□□□□ -0.22
PHGDH-201ENST00000369407 RTL9Q8NET4 1388 aa13.68□□□□□ -0.22
PHGDH-201ENST00000369407 BACH1O14867 736 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 KLRC4O43908 158 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 OPA1O60313 960 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 TACC1O75410 805 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 GLI1P08151 1106 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 EEF1GP26641 437 aaKnown RBP13.67□□□□□ -0.22
PHGDH-201ENST00000369407 ZBED6P86452 979 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 STK4Q13043 487 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 PTPROQ16827 1216 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 IQCEQ6IPM2 695 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 TMTC3Q6ZXV5 915 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 MMRN2Q9H8L6 949 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 STIM2Q9P246 746 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 PCDH11YQ9BZA8 1340 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 AKR1B10O60218 316 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 KIAA0754O94854 1291 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 ENOX2Q16206 610 aaKnown RBP13.67□□□□□ -0.22
PHGDH-201ENST00000369407 C8orf74Q6P047 294 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 MMGT1Q8N4V1 131 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 CNTNAP5Q8WYK1 1306 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 ANO9A1A5B4 782 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 ERVV-2B6SEH9 535 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 HPDP32754 393 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-201ENST00000369407 UBA7P41226 1012 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 RASSF7Q02833 373 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 CCDC155Q8N6L0 562 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 TMOD3Q9NYL9 352 aa13.67□□□□□ -0.22
PHGDH-201ENST00000369407 PACSIN2Q9UNF0 486 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-201ENST00000369407 MAGEB6P1A0A0J9YX57 407 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 SCG2P13521 617 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 SCP2P22307 547 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 KIF11P52732 1056 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 GUCY2DQ02846 1103 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 GFPT1Q06210 699 aaPredicted RBP13.66□□□□□ -0.22
PHGDH-201ENST00000369407 PDE4DQ08499 809 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 FAM43BQ6ZT52 329 aaPredicted RBP13.66□□□□□ -0.22
PHGDH-201ENST00000369407 IQCA1Q86XH1 822 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 PURBQ96QR8 312 aaKnown RBP13.66□□□□□ -0.22
PHGDH-201ENST00000369407 CEP89Q96ST8 783 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 THAP9Q9H5L6 903 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 SH2D4AQ9H788 454 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 EPB41L5Q9HCM4 733 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 LMTK3Q96Q04 1460 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 ZNF233A6NK53 670 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 GNAT2P19087 354 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 EPHB4P54760 987 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms