RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 KCNA2P16389 499 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 SEC24CP53992 1094 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 MTTPP55157 894 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 EPAS1Q99814 870 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 ETNK1Q9HBU6 452 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 BLOC1S6Q9UL45 172 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 ZNF232Q9UNY5 417 aa11.4□□□□□ -0.58
PRDM1-201ENST00000369089 EME2A4GXA9 379 aaPredicted RBP11.39□□□□□ -0.59
PRDM1-201ENST00000369089 TTC39AQ5SRH9 613 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 THOC7Q6I9Y2 204 aaKnown RBP11.39□□□□□ -0.59
PRDM1-201ENST00000369089 MIS18BP1Q6P0N0 1132 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 CCDC25Q86WR0 208 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 GALNT15Q8N3T1 639 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 FAM133AQ8N9E0 248 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 OTUD7AQ8TE49 926 aaPredicted RBP11.39□□□□□ -0.59
PRDM1-201ENST00000369089 TTC1Q99614 292 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 RANBP17Q9H2T7 1088 aaKnown RBP11.39□□□□□ -0.59
PRDM1-201ENST00000369089 IQSEC3Q9UPP2 1182 aaPredicted RBP11.39□□□□□ -0.59
PRDM1-201ENST00000369089 ITM2BQ9Y287 266 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 DNAJC6O75061 913 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 ADARP55265 1226 aaKnown RBP11.39□□□□□ -0.59
PRDM1-201ENST00000369089 CHRNA2Q15822 529 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 OR8K1Q8NGG5 319 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 NDNQ99608 321 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 PALD1Q9ULE6 856 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 LZTS1Q9Y250 596 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 ATXN2Q99700 1313 aaKnown RBP11.39□□□□□ -0.59
PRDM1-201ENST00000369089 SOWAHDA6NJG2 315 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 MAN1A2O60476 641 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 GSTA1P08263 222 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 MMEP08473 750 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 KRT13P13646 458 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 ZNF554Q86TJ5 538 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 NCAPG2Q86XI2 1143 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 LRRN4CLQ8ND94 238 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 RUBCNQ92622 972 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 TUBB6Q9BUF5 446 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 NEO1Q92859 1461 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 PI4KAP2A4QPH2 592 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 TSPAN9O75954 239 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 LCA5LO95447 670 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 STARD3NLO95772 234 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 RNASE9P60153 205 aaKnown RBP11.39□□□□□ -0.59
PRDM1-201ENST00000369089 CALCOCO2Q13137 446 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 C6orf118Q5T5N4 469 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 SH2D3CQ8N5H7 860 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 PI4KAP1Q8N8J0 262 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 MAB21L3Q8N8X9 362 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 PNKPQ96T60 521 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 MYD88Q99836 296 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 NUF2Q9BZD4 464 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 VPS16Q9H269 839 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 SLC39A2Q9NP94 309 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 PLAAQ9Y263 795 aa11.39□□□□□ -0.59
PRDM1-201ENST00000369089 ADGBQ8N7X0 1667 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 ABLIM1O14639 778 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 IFNL2Q8IZJ0 200 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 PIP4K2CQ8TBX8 421 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 KIFAP3Q92845 792 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 CCDC85AQ96PX6 553 aaPredicted RBP11.38□□□□□ -0.59
PRDM1-201ENST00000369089 C10orf88Q9H8K7 445 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 MRGBPQ9NV56 204 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 ANXA1P04083 346 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 GHRP10912 638 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 ALOX15P16050 662 aaPredicted RBP11.38□□□□□ -0.59
PRDM1-201ENST00000369089 MRPS25P82663 173 aaKnown RBP11.38□□□□□ -0.59
PRDM1-201ENST00000369089 ATP8B2P98198 1209 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 COQ7Q99807 217 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 FAM53CQ9NYF3 392 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 PTPDC1A2A3K4 754 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 M0R2C6 588 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 VAMP4O75379 141 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 CDC25CP30307 473 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 AFMP43652 599 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 KRT72Q14CN4 511 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 PSMD6Q15008 389 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 ANKRD20A8PQ5CZ79 823 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 GJC2Q5T442 439 aaPredicted RBP11.38□□□□□ -0.59
PRDM1-201ENST00000369089 WLSQ5T9L3 541 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 WDR93Q6P2C0 686 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 SESTD1Q86VW0 696 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 ATP2A3Q93084 1043 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 TMOD3Q9NYL9 352 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 MYBPC2Q14324 1141 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 KDM7AQ6ZMT4 941 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 TRIM50Q86XT4 487 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 TSPYL6Q8N831 410 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 IL1RAPL1Q9NZN1 696 aa11.38□□□□□ -0.59
PRDM1-201ENST00000369089 RABL2AQ9UBK7 228 aaPredicted RBP11.38□□□□□ -0.59
PRDM1-201ENST00000369089 APOEP02649 317 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 EIF3BP55884 814 aaKnown RBP11.37□□□□□ -0.59
PRDM1-201ENST00000369089 FKBP4Q02790 459 aaKnown RBP eCLIP11.37□□□□□ -0.59
PRDM1-201ENST00000369089 MTHFSDQ2M296 383 aaKnown RBP11.37□□□□□ -0.59
PRDM1-201ENST00000369089 PRR16Q569H4 304 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 CCNI2Q6ZMN8 369 aaPredicted RBP11.37□□□□□ -0.59
PRDM1-201ENST00000369089 NUP58Q9BVL2 599 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 ZCWPW1Q9H0M4 648 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 TAF1DQ9H5J8 278 aaPredicted RBP11.37□□□□□ -0.59
PRDM1-201ENST00000369089 ZWILCHQ9H900 591 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms