RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TMOD4Q9NZQ9 345 aa27.26■■□□□ 1.96
SNX3-203ENST00000368979 RLFQ13129 1914 aa27.26■■□□□ 1.95
SNX3-203ENST00000368979 TRAF5O00463 557 aa27.26■■□□□ 1.95
SNX3-203ENST00000368979 TAL1P17542 331 aaPredicted RBP27.26■■□□□ 1.95
SNX3-203ENST00000368979 ZNF174Q15697 407 aa27.26■■□□□ 1.95
SNX3-203ENST00000368979 FBXO2Q9UK22 296 aaPredicted RBP27.26■■□□□ 1.95
SNX3-203ENST00000368979 ZNF536O15090 1300 aa27.25■■□□□ 1.95
SNX3-203ENST00000368979 OPLAHO14841 1288 aa27.25■■□□□ 1.95
SNX3-203ENST00000368979 PTPREP23469 700 aa27.25■■□□□ 1.95
SNX3-203ENST00000368979 LDLRAD1Q5T700 205 aa27.25■■□□□ 1.95
SNX3-203ENST00000368979 SAMD1Q6SPF0 538 aaPredicted RBP27.25■■□□□ 1.95
SNX3-203ENST00000368979 TEX2Q8IWB9 1127 aa27.25■■□□□ 1.95
SNX3-203ENST00000368979 KRI1Q8N9T8 703 aaKnown RBP27.25■■□□□ 1.95
SNX3-203ENST00000368979 MRPS27Q92552 414 aaKnown RBP27.25■■□□□ 1.95
SNX3-203ENST00000368979 GOLPH3LQ9H4A5 285 aa27.25■■□□□ 1.95
SNX3-203ENST00000368979 SLC38A10Q9HBR0 1119 aa27.25■■□□□ 1.95
SNX3-203ENST00000368979 NMRK2Q9NPI5 230 aa27.25■■□□□ 1.95
SNX3-203ENST00000368979 MEIS2O14770 477 aa27.24■■□□□ 1.95
SNX3-203ENST00000368979 CUTAO60888 179 aa27.24■■□□□ 1.95
SNX3-203ENST00000368979 ICAM1P05362 532 aa27.24■■□□□ 1.95
SNX3-203ENST00000368979 ATP2C1P98194 919 aaPredicted RBP27.24■■□□□ 1.95
SNX3-203ENST00000368979 NEK8Q86SG6 692 aa27.24■■□□□ 1.95
SNX3-203ENST00000368979 TBCKQ8TEA7 893 aa27.24■■□□□ 1.95
SNX3-203ENST00000368979 ABCB11O95342 1321 aa27.23■■□□□ 1.95
SNX3-203ENST00000368979 FDX1P10109 184 aa27.23■■□□□ 1.95
SNX3-203ENST00000368979 FMR1Q06787 632 aaKnown RBP eCLIP27.23■■□□□ 1.95
SNX3-203ENST00000368979 ZSCAN23Q3MJ62 389 aa27.23■■□□□ 1.95
SNX3-203ENST00000368979 FSIP1Q8NA03 581 aa27.23■■□□□ 1.95
SNX3-203ENST00000368979 SRPRBQ9Y5M8 271 aaKnown RBP27.23■■□□□ 1.95
SNX3-203ENST00000368979 MRVI1Q9Y6F6 885 aa27.23■■□□□ 1.95
SNX3-203ENST00000368979 UNCXA6NJT0 531 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 USP17L15C9J2P7 530 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 USP17L13C9JLJ4 530 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 USP17L11C9JVI0 530 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 USP17L18D6R9N7 530 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 USP17L22D6RA61 530 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 USP17L17D6RBQ6 530 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 USP17L19D6RCP7 530 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 USP17L20D6RJB6 530 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 CMA1P23946 247 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 MCM7P33993 719 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 USP17L24Q0WX57 530 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 PPIL2Q13356 520 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 AP3B2Q13367 1082 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 CCDC183Q5T5S1 534 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 USP17L6PQ6QN14 398 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 CATSPERGQ6ZRH7 1159 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 OTUD5Q96G74 571 aa27.22■■□□□ 1.95
SNX3-203ENST00000368979 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.22■■□□□ 1.95
SNX3-203ENST00000368979 IRF6O14896 467 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 PTGDRQ13258 359 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 MCTP2Q6DN12 878 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 ENGASEQ8NFI3 743 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 CLIC6Q96NY7 704 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 DDX19AQ9NUU7 478 aaKnown RBP27.21■■□□□ 1.95
SNX3-203ENST00000368979 DACT1Q9NYF0 836 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 KCNH4Q9UQ05 1017 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 MRPL11Q9Y3B7 192 aaKnown RBP27.21■■□□□ 1.95
SNX3-203ENST00000368979 A0A0G2JLL6 359 aaPredicted RBP27.21■■□□□ 1.95
SNX3-203ENST00000368979 PIK3CDO00329 1044 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 CXCL11O14625 94 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 NR1I2O75469 434 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 ORC2Q13416 577 aaPredicted RBP27.21■■□□□ 1.95
SNX3-203ENST00000368979 SHC4Q6S5L8 630 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 CCDC73Q6ZRK6 1079 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 PRRT2Q7Z6L0 340 aaPredicted RBP27.21■■□□□ 1.95
SNX3-203ENST00000368979 C4orf32Q8N8J7 132 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 ATG4CQ96DT6 458 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 ADAMTS5Q9UNA0 930 aa27.21■■□□□ 1.95
SNX3-203ENST00000368979 MYPNQ86TC9 1320 aa27.2■■□□□ 1.94
SNX3-203ENST00000368979 FAM237AA0A1B0GTK4 181 aa27.2■■□□□ 1.94
SNX3-203ENST00000368979 VWA5AO00534 786 aa27.2■■□□□ 1.94
SNX3-203ENST00000368979 EDIL3O43854 480 aa27.2■■□□□ 1.94
SNX3-203ENST00000368979 DSG3P32926 999 aa27.2■■□□□ 1.94
SNX3-203ENST00000368979 GRIN1Q05586 938 aa27.2■■□□□ 1.94
SNX3-203ENST00000368979 FAM160A1Q05DH4 1040 aa27.2■■□□□ 1.94
SNX3-203ENST00000368979 SNW1Q13573 536 aaKnown RBP27.2■■□□□ 1.94
SNX3-203ENST00000368979 LETM2Q2VYF4 491 aa27.2■■□□□ 1.94
SNX3-203ENST00000368979 RESP18Q5W5W9 173 aa27.2■■□□□ 1.94
SNX3-203ENST00000368979 ZNF579Q8NAF0 562 aaKnown RBP27.2■■□□□ 1.94
SNX3-203ENST00000368979 FERMT2Q96AC1 680 aa27.2■■□□□ 1.94
SNX3-203ENST00000368979 AGBL1Q96MI9 1066 aa27.2■■□□□ 1.94
SNX3-203ENST00000368979 ZNF408Q9H9D4 720 aa27.2■■□□□ 1.94
SNX3-203ENST00000368979 CCPG1Q9ULG6 757 aa27.2■■□□□ 1.94
SNX3-203ENST00000368979 ZBED4O75132 1171 aa27.19■■□□□ 1.94
SNX3-203ENST00000368979 FKBP1BP68106 108 aa27.19■■□□□ 1.94
SNX3-203ENST00000368979 COG2Q14746 738 aa27.19■■□□□ 1.94
SNX3-203ENST00000368979 PROCA1Q8NCQ7 364 aaPredicted RBP27.19■■□□□ 1.94
SNX3-203ENST00000368979 OPTNQ96CV9 577 aa27.19■■□□□ 1.94
SNX3-203ENST00000368979 ANO3Q9BYT9 981 aa27.19■■□□□ 1.94
SNX3-203ENST00000368979 PNMA2Q9UL42 364 aa27.19■■□□□ 1.94
SNX3-203ENST00000368979 SMCHD1A6NHR9 2005 aa27.18■■□□□ 1.94
SNX3-203ENST00000368979 A0A1B0GVL5 298 aa27.18■■□□□ 1.94
SNX3-203ENST00000368979 GSE1Q14687 1217 aa27.18■■□□□ 1.94
SNX3-203ENST00000368979 REPS2Q8NFH8 660 aa27.18■■□□□ 1.94
SNX3-203ENST00000368979 ZNF526Q8TF50 670 aaPredicted RBP27.18■■□□□ 1.94
SNX3-203ENST00000368979 P2RX7Q99572 595 aaKnown RBP27.18■■□□□ 1.94
SNX3-203ENST00000368979 HPSEQ9Y251 543 aa27.18■■□□□ 1.94
SNX3-203ENST00000368979 RBBP6Q7Z6E9 1792 aaKnown RBP27.18■■□□□ 1.94
SNX3-203ENST00000368979 CCNT1O60563 726 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms