RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 SNCAIPQ9Y6H5 919 aa22.16■■□□□ 1.14
CHTOP-204ENST00000368694 SMCHD1A6NHR9 2005 aa22.15■■□□□ 1.14
CHTOP-204ENST00000368694 FLOT1O75955 427 aa22.15■■□□□ 1.14
CHTOP-204ENST00000368694 PTPREP23469 700 aa22.15■■□□□ 1.14
CHTOP-204ENST00000368694 NDUFA8P51970 172 aa22.15■■□□□ 1.14
CHTOP-204ENST00000368694 TRAF1Q13077 416 aa22.15■■□□□ 1.14
CHTOP-204ENST00000368694 CAMK4Q16566 473 aa22.15■■□□□ 1.14
CHTOP-204ENST00000368694 PRPF38AQ8NAV1 312 aaKnown RBP22.15■■□□□ 1.14
CHTOP-204ENST00000368694 SRPRBQ9Y5M8 271 aaKnown RBP22.15■■□□□ 1.14
CHTOP-204ENST00000368694 KINO60870 393 aaKnown RBP22.15■■□□□ 1.14
CHTOP-204ENST00000368694 LETM2Q2VYF4 491 aa22.15■■□□□ 1.14
CHTOP-204ENST00000368694 NEK8Q86SG6 692 aa22.15■■□□□ 1.14
CHTOP-204ENST00000368694 USP17L15C9J2P7 530 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 C19orf81C9J6K1 198 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 USP17L13C9JLJ4 530 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 USP17L11C9JVI0 530 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 USP17L18D6R9N7 530 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 USP17L22D6RA61 530 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 USP17L17D6RBQ6 530 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 USP17L19D6RCP7 530 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 USP17L20D6RJB6 530 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 LETM1O95202 739 aaPredicted RBP22.14■■□□□ 1.13
CHTOP-204ENST00000368694 POTEIP0CG38 1075 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 POTEJP0CG39 1038 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 CLK2P49760 499 aaKnown RBP22.14■■□□□ 1.13
CHTOP-204ENST00000368694 ATP2C1P98194 919 aaPredicted RBP22.14■■□□□ 1.13
CHTOP-204ENST00000368694 USP17L24Q0WX57 530 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 SNW1Q13573 536 aaKnown RBP22.14■■□□□ 1.13
CHTOP-204ENST00000368694 USP17L6PQ6QN14 398 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 SHC4Q6S5L8 630 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 TNMDQ9H2S6 317 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 AFG3L2Q9Y4W6 797 aa22.14■■□□□ 1.13
CHTOP-204ENST00000368694 PARP14Q460N5 1801 aa22.13■■□□□ 1.13
CHTOP-204ENST00000368694 CCNT1O60563 726 aaKnown RBP22.13■■□□□ 1.13
CHTOP-204ENST00000368694 PFKFB1P16118 471 aa22.13■■□□□ 1.13
CHTOP-204ENST00000368694 GRIN1Q05586 938 aa22.13■■□□□ 1.13
CHTOP-204ENST00000368694 TMOD4Q9NZQ9 345 aa22.13■■□□□ 1.13
CHTOP-204ENST00000368694 MORC2Q9Y6X9 1032 aaPredicted RBP22.13■■□□□ 1.13
CHTOP-204ENST00000368694 SPECC1Q5M775 1068 aa22.13■■□□□ 1.13
CHTOP-204ENST00000368694 RESP18Q5W5W9 173 aa22.13■■□□□ 1.13
CHTOP-204ENST00000368694 ENGASEQ8NFI3 743 aa22.13■■□□□ 1.13
CHTOP-204ENST00000368694 FERMT2Q96AC1 680 aa22.13■■□□□ 1.13
CHTOP-204ENST00000368694 CLSTN2Q9H4D0 955 aa22.13■■□□□ 1.13
CHTOP-204ENST00000368694 MYH7BA7E2Y1 1941 aa22.12■■□□□ 1.13
CHTOP-204ENST00000368694 GOLGA6L3A6NEY3 463 aa22.12■■□□□ 1.13
CHTOP-204ENST00000368694 LRSAM1Q6UWE0 723 aa22.12■■□□□ 1.13
CHTOP-204ENST00000368694 MOB2Q70IA6 237 aa22.12■■□□□ 1.13
CHTOP-204ENST00000368694 ANKRD13AQ8IZ07 590 aa22.12■■□□□ 1.13
CHTOP-204ENST00000368694 FMR1NBQ8N0W7 255 aaPredicted RBP22.12■■□□□ 1.13
CHTOP-204ENST00000368694 PTPRFP10586 1907 aa22.12■■□□□ 1.13
CHTOP-204ENST00000368694 MAP1SQ66K74 1059 aaPredicted RBP22.11■■□□□ 1.13
CHTOP-204ENST00000368694 C12orf42Q96LP6 360 aa22.11■■□□□ 1.13
CHTOP-204ENST00000368694 CSRNP2Q9H175 543 aa22.11■■□□□ 1.13
CHTOP-204ENST00000368694 ELP3Q9H9T3 547 aa22.11■■□□□ 1.13
CHTOP-204ENST00000368694 RRAGCQ9HB90 399 aa22.11■■□□□ 1.13
CHTOP-204ENST00000368694 MAP3K11Q16584 847 aa22.11■■□□□ 1.13
CHTOP-204ENST00000368694 ZNF579Q8NAF0 562 aaKnown RBP22.11■■□□□ 1.13
CHTOP-204ENST00000368694 PPP1R9AQ9ULJ8 1098 aa22.11■■□□□ 1.13
CHTOP-204ENST00000368694 CTDP1Q9Y5B0 961 aaPredicted RBP22.11■■□□□ 1.13
CHTOP-204ENST00000368694 VWA3AA6NCI4 1184 aa22.1■■□□□ 1.13
CHTOP-204ENST00000368694 DCAF8L1A6NGE4 600 aa22.1■■□□□ 1.13
CHTOP-204ENST00000368694 MEIS2O14770 477 aa22.1■■□□□ 1.13
CHTOP-204ENST00000368694 SYKP43405 635 aa22.1■■□□□ 1.13
CHTOP-204ENST00000368694 ARMC9Q7Z3E5 817 aa22.1■■□□□ 1.13
CHTOP-204ENST00000368694 LDHDQ86WU2 507 aa22.1■■□□□ 1.13
CHTOP-204ENST00000368694 GAS2L3Q86XJ1 694 aa22.1■■□□□ 1.13
CHTOP-204ENST00000368694 RBM46Q8TBY0 533 aaKnown RBP22.1■■□□□ 1.13
CHTOP-204ENST00000368694 CNKSR2Q8WXI2 1034 aa22.1■■□□□ 1.13
CHTOP-204ENST00000368694 FAM13BQ9NYF5 915 aa22.1■■□□□ 1.13
CHTOP-204ENST00000368694 CCPG1Q9ULG6 757 aa22.1■■□□□ 1.13
CHTOP-204ENST00000368694 CLMNQ96JQ2 1002 aa22.1■■□□□ 1.13
CHTOP-204ENST00000368694 ZNF408Q9H9D4 720 aa22.1■■□□□ 1.13
CHTOP-204ENST00000368694 NEMFO60524 1076 aa22.09■■□□□ 1.13
CHTOP-204ENST00000368694 ZNF202O95125 648 aa22.09■■□□□ 1.13
CHTOP-204ENST00000368694 ICAM1P05362 532 aa22.09■■□□□ 1.13
CHTOP-204ENST00000368694 AP3B2Q13367 1082 aa22.09■■□□□ 1.13
CHTOP-204ENST00000368694 ARL6IP4Q66PJ3 421 aaKnown RBP22.09■■□□□ 1.13
CHTOP-204ENST00000368694 CKAP2LQ8IYA6 745 aa22.09■■□□□ 1.13
CHTOP-204ENST00000368694 CPXCR1Q8N123 301 aa22.09■■□□□ 1.13
CHTOP-204ENST00000368694 OTUD5Q96G74 571 aa22.09■■□□□ 1.13
CHTOP-204ENST00000368694 MRPL11Q9Y3B7 192 aaKnown RBP22.09■■□□□ 1.13
CHTOP-204ENST00000368694 ABCB11O95342 1321 aa22.08■■□□□ 1.13
CHTOP-204ENST00000368694 SPDYE3A6NKU9 549 aa22.08■■□□□ 1.13
CHTOP-204ENST00000368694 OPLAHO14841 1288 aa22.08■■□□□ 1.13
CHTOP-204ENST00000368694 C4orf32Q8N8J7 132 aa22.08■■□□□ 1.13
CHTOP-204ENST00000368694 AGBL1Q96MI9 1066 aa22.08■■□□□ 1.13
CHTOP-204ENST00000368694 ANO3Q9BYT9 981 aa22.08■■□□□ 1.13
CHTOP-204ENST00000368694 SLC38A10Q9HBR0 1119 aa22.08■■□□□ 1.13
CHTOP-204ENST00000368694 KCNH3Q9ULD8 1083 aa22.08■■□□□ 1.13
CHTOP-204ENST00000368694 HPSEQ9Y251 543 aa22.08■■□□□ 1.13
CHTOP-204ENST00000368694 COL11A1P12107 1806 aaPredicted RBP22.08■■□□□ 1.13
CHTOP-204ENST00000368694 CFBP00751 764 aa22.08■■□□□ 1.12
CHTOP-204ENST00000368694 HOXA13P31271 388 aaPredicted RBP22.08■■□□□ 1.12
CHTOP-204ENST00000368694 MCTP2Q6DN12 878 aa22.08■■□□□ 1.12
CHTOP-204ENST00000368694 SDF4Q9BRK5 362 aa22.08■■□□□ 1.12
CHTOP-204ENST00000368694 TMEM60Q9H2L4 133 aa22.08■■□□□ 1.12
CHTOP-204ENST00000368694 ZNF536O15090 1300 aa22.07■■□□□ 1.12
CHTOP-204ENST00000368694 TRAF5O00463 557 aa22.07■■□□□ 1.12
CHTOP-204ENST00000368694 LAD1O00515 517 aa22.07■■□□□ 1.12
CHTOP-204ENST00000368694 ERO1BQ86YB8 467 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms