RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 AOX1Q06278 1338 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 HTATSF1O43719 755 aaKnown RBP7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 TLR2O60603 784 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 USP2O75604 605 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 SASH1O94885 1247 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 MAP3K6O95382 1288 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 HCLS1P14317 486 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 GRAPQ13588 217 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 TAF1CQ15572 869 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 KRT25Q7Z3Z0 450 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 HSCBQ8IWL3 235 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 RPAP2Q8IXW5 612 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 TBC1D16Q8TBP0 767 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 GRAPLQ8TC17 118 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 PMEPA1Q969W9 287 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 DEFB118Q96PH6 123 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 C1QTNF1Q9BXJ1 281 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 OXCT2Q9BYC2 517 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 BABAM1Q9NWV8 329 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 HCN2Q9UL51 889 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 GABRQQ9UN88 632 aa7.86□□□□□ -1.15
ECHDC1-202ENST00000368289 PTPRZ1P23471 2315 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 PFASO15067 1338 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 MAP3K15Q6ZN16 1313 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 ERVV-1B6SEH8 477 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 TFRCP02786 760 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 PSAPP07602 524 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 HMOX1P09601 288 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 ERCC3P19447 782 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 NFKB1P19838 968 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 TARSP26639 723 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 PSMC4P43686 418 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 PRMT2P55345 433 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 KRT76Q01546 638 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 TRIP4Q15650 581 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 SKOR2Q2VWA4 1001 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 OTUD7BQ6GQQ9 843 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 C17orf99Q6UX52 265 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 SKAP1Q86WV1 359 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 CELF1Q92879 486 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 FAM129BQ96TA1 746 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 ELP3Q9H9T3 547 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 ZFYVE28Q9HCC9 887 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 ABI2Q9NYB9 513 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 PCDHAC2Q9Y5I4 1007 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 DMXL1Q9Y485 3027 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 NUP98P52948 1817 aa7.85□□□□□ -1.15
ECHDC1-202ENST00000368289 ADGRA2Q96PE1 1338 aa7.84□□□□□ -1.15
ECHDC1-202ENST00000368289 SLURP2P0DP57 97 aa7.84□□□□□ -1.15
ECHDC1-202ENST00000368289 NF2P35240 595 aa7.84□□□□□ -1.15
ECHDC1-202ENST00000368289 PRKCZQ05513 592 aa7.84□□□□□ -1.15
ECHDC1-202ENST00000368289 GRIN2CQ14957 1233 aa7.84□□□□□ -1.15
ECHDC1-202ENST00000368289 ARHGEF6Q15052 776 aa7.84□□□□□ -1.15
ECHDC1-202ENST00000368289 TWISTNBQ3B726 338 aaPredicted RBP7.84□□□□□ -1.15
ECHDC1-202ENST00000368289 PODNQ7Z5L7 613 aa7.84□□□□□ -1.15
ECHDC1-202ENST00000368289 NECAB2Q7Z6G3 386 aa7.84□□□□□ -1.15
ECHDC1-202ENST00000368289 TNFRSF25Q93038 417 aa7.84□□□□□ -1.15
ECHDC1-202ENST00000368289 OPTNQ96CV9 577 aa7.84□□□□□ -1.15
ECHDC1-202ENST00000368289 ASB16Q96NS5 453 aa7.84□□□□□ -1.15
ECHDC1-202ENST00000368289 LAMB2P55268 1798 aa7.84□□□□□ -1.15
ECHDC1-202ENST00000368289 RIF1Q5UIP0 2472 aaKnown RBP7.84□□□□□ -1.16
ECHDC1-202ENST00000368289 CEMIPQ8WUJ3 1361 aa7.84□□□□□ -1.16
ECHDC1-202ENST00000368289 MYO9BQ13459 2157 aa7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 FAM86C2PA6NEL3 165 aa7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 EPB41L2O43491 1005 aaKnown RBP7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 WIPF1O43516 503 aa7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 FRAT2O75474 233 aaPredicted RBP7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 ELNP15502 786 aa7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 ALAS2P22557 587 aa7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 PCBP4P57723 403 aaKnown RBP7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 PLAURQ03405 335 aa7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 C9orf50Q5SZB4 431 aa7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 LCE2AQ5TA79 106 aaPredicted RBP7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 NBPF12Q5TAG4 269 aaPredicted RBP7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 RAB44Q7Z6P3 723 aaPredicted RBP7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 RAET1EQ8TD07 263 aa7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 ATXN2LQ8WWM7 1075 aaKnown RBP7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 TMX4Q9H1E5 349 aaPredicted RBP7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 DEFB129Q9H1M3 183 aa7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 TLR7Q9NYK1 1049 aaKnown RBP7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 GGA1Q9UJY5 639 aa7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 FASNP49327 2511 aaKnown RBP7.83□□□□□ -1.16
ECHDC1-202ENST00000368289 TCF20Q9UGU0 1960 aaKnown RBP7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 CCL15-CCL14A0A0B4J2E2 113 aa7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 NEURL1BA8MQ27 555 aa7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 PHF20L1A8MW92 1017 aa7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 BTBD19C9JJ37 291 aa7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 CHL1O00533 1208 aa7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 HMMRO75330 724 aa7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 SNRPA1P09661 255 aaKnown RBP7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 SOX18P35713 384 aa7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 PLCB3Q01970 1234 aa7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 NHLH1Q02575 133 aa7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 SHHQ15465 462 aa7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 CCL15Q16663 113 aa7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 DACT2Q5SW24 774 aa7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 CASC1Q6TDU7 716 aa7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 SLCO4C1Q6ZQN7 724 aa7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.82□□□□□ -1.16
ECHDC1-202ENST00000368289 DHX32Q7L7V1 743 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms