RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 MRPL58Q14197 206 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-201ENST00000368287 SPRED1Q7Z699 444 aa5.78□□□□□ -1.48
ECHDC1-201ENST00000368287 SRGAP3O43295 1099 aa5.77□□□□□ -1.49
ECHDC1-201ENST00000368287 NCAM1P13591 858 aa5.77□□□□□ -1.49
ECHDC1-201ENST00000368287 BMP8BP34820 402 aa5.77□□□□□ -1.49
ECHDC1-201ENST00000368287 MC3RP41968 323 aa5.77□□□□□ -1.49
ECHDC1-201ENST00000368287 SARSP49591 514 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-201ENST00000368287 ST13P50502 369 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-201ENST00000368287 CAMK2GQ13555 558 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-201ENST00000368287 MLECQ14165 292 aa5.77□□□□□ -1.49
ECHDC1-201ENST00000368287 ARSHQ5FYA8 562 aa5.77□□□□□ -1.49
ECHDC1-201ENST00000368287 MEI1Q5TIA1 1274 aa5.77□□□□□ -1.49
ECHDC1-201ENST00000368287 BICRALQ6AI39 1079 aa5.77□□□□□ -1.49
ECHDC1-201ENST00000368287 AP5S1Q9NUS5 200 aa5.77□□□□□ -1.49
ECHDC1-201ENST00000368287 NTMQ9P121 344 aa5.77□□□□□ -1.49
ECHDC1-201ENST00000368287 USP31Q70CQ4 1352 aa5.77□□□□□ -1.49
ECHDC1-201ENST00000368287 CTSHP09668 335 aa5.76□□□□□ -1.49
ECHDC1-201ENST00000368287 PRR5P85299 388 aa5.76□□□□□ -1.49
ECHDC1-201ENST00000368287 LMNB2Q03252 620 aa5.76□□□□□ -1.49
ECHDC1-201ENST00000368287 TBC1D10BQ4KMP7 808 aaPredicted RBP5.76□□□□□ -1.49
ECHDC1-201ENST00000368287 CRIP3Q6Q6R5 217 aa5.76□□□□□ -1.49
ECHDC1-201ENST00000368287 ZNF761Q86XN6 746 aaPredicted RBP5.76□□□□□ -1.49
ECHDC1-201ENST00000368287 JAMLQ86YT9 394 aa5.76□□□□□ -1.49
ECHDC1-201ENST00000368287 NAT16Q8N8M0 369 aa5.76□□□□□ -1.49
ECHDC1-201ENST00000368287 TMEM52Q8NDY8 209 aa5.76□□□□□ -1.49
ECHDC1-201ENST00000368287 NOC4LQ9BVI4 516 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-201ENST00000368287 DBR1Q9UK59 544 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-201ENST00000368287 F8W031 263 aaPredicted RBP5.75□□□□□ -1.49
ECHDC1-201ENST00000368287 FZD7O75084 574 aa5.75□□□□□ -1.49
ECHDC1-201ENST00000368287 RAD51AP2Q09MP3 1159 aa5.75□□□□□ -1.49
ECHDC1-201ENST00000368287 B3GNT8Q7Z7M8 397 aa5.75□□□□□ -1.49
ECHDC1-201ENST00000368287 TMEM87AQ8NBN3 555 aa5.75□□□□□ -1.49
ECHDC1-201ENST00000368287 KISS1RQ969F8 398 aaPredicted RBP5.75□□□□□ -1.49
ECHDC1-201ENST00000368287 BACH2Q9BYV9 841 aa5.75□□□□□ -1.49
ECHDC1-201ENST00000368287 ANTXR1Q9H6X2 564 aa5.75□□□□□ -1.49
ECHDC1-201ENST00000368287 IGSF5Q9NSI5 407 aa5.75□□□□□ -1.49
ECHDC1-201ENST00000368287 ST6GALNAC2Q9UJ37 374 aa5.75□□□□□ -1.49
ECHDC1-201ENST00000368287 F6X3S4 739 aa5.74□□□□□ -1.49
ECHDC1-201ENST00000368287 PF4P02776 101 aa5.74□□□□□ -1.49
ECHDC1-201ENST00000368287 ASGR2P07307 311 aa5.74□□□□□ -1.49
ECHDC1-201ENST00000368287 VAV1P15498 845 aa5.74□□□□□ -1.49
ECHDC1-201ENST00000368287 CTSKP43235 329 aa5.74□□□□□ -1.49
ECHDC1-201ENST00000368287 HLA-DQA1Q5Y7H0 255 aa5.74□□□□□ -1.49
ECHDC1-201ENST00000368287 CRTC3Q6UUV7 619 aa5.74□□□□□ -1.49
ECHDC1-201ENST00000368287 ALG3Q92685 438 aa5.74□□□□□ -1.49
ECHDC1-201ENST00000368287 ZNF512BQ96KM6 892 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-201ENST00000368287 GFOD1Q9NXC2 390 aa5.74□□□□□ -1.49
ECHDC1-201ENST00000368287 VAMP1P23763 118 aa5.73□□□□□ -1.49
ECHDC1-201ENST00000368287 PWP1Q13610 501 aa5.73□□□□□ -1.49
ECHDC1-201ENST00000368287 TTLL7Q6ZT98 887 aa5.73□□□□□ -1.49
ECHDC1-201ENST00000368287 RELL1Q8IUW5 271 aa5.73□□□□□ -1.49
ECHDC1-201ENST00000368287 VPS11Q9H270 941 aa5.73□□□□□ -1.49
ECHDC1-201ENST00000368287 PDLIM7Q9NR12 457 aa5.73□□□□□ -1.49
ECHDC1-201ENST00000368287 CLEC3AO75596 197 aa5.72□□□□□ -1.49
ECHDC1-201ENST00000368287 POLR2BP30876 1174 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-201ENST00000368287 REC114Q7Z4M0 266 aa5.72□□□□□ -1.49
ECHDC1-201ENST00000368287 ADAMTS17Q8TE56 1095 aa5.72□□□□□ -1.49
ECHDC1-201ENST00000368287 MKRN2Q9H000 416 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-201ENST00000368287 FBXL21Q9UKT6 434 aa5.72□□□□□ -1.49
ECHDC1-201ENST00000368287 TSC22D4Q9Y3Q8 395 aa5.72□□□□□ -1.49
ECHDC1-201ENST00000368287 PCDHB12Q9Y5F1 795 aa5.72□□□□□ -1.49
ECHDC1-201ENST00000368287 ZNF536O15090 1300 aa5.72□□□□□ -1.49
ECHDC1-201ENST00000368287 GSTM1P09488 218 aa5.71□□□□□ -1.5
ECHDC1-201ENST00000368287 TACR1P25103 407 aa5.71□□□□□ -1.5
ECHDC1-201ENST00000368287 MPP2Q14168 576 aa5.71□□□□□ -1.5
ECHDC1-201ENST00000368287 RTP2Q5QGT7 225 aa5.71□□□□□ -1.5
ECHDC1-201ENST00000368287 GLB1LQ6UWU2 654 aa5.71□□□□□ -1.5
ECHDC1-201ENST00000368287 HS2ST1Q7LGA3 356 aa5.71□□□□□ -1.5
ECHDC1-201ENST00000368287 SMARCC2Q8TAQ2 1214 aa5.71□□□□□ -1.5
ECHDC1-201ENST00000368287 NOX5Q96PH1 765 aa5.71□□□□□ -1.5
ECHDC1-201ENST00000368287 ZNF747Q9BV97 191 aa5.71□□□□□ -1.5
ECHDC1-201ENST00000368287 PCED1AQ9H1Q7 454 aa5.71□□□□□ -1.5
ECHDC1-201ENST00000368287 SPATA6Q9NWH7 488 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-201ENST00000368287 GMIPQ9P107 970 aa5.71□□□□□ -1.5
ECHDC1-201ENST00000368287 PMLP29590 882 aa5.7□□□□□ -1.5
ECHDC1-201ENST00000368287 RANGAP1P46060 587 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-201ENST00000368287 SNAP47Q5SQN1 464 aa5.7□□□□□ -1.5
ECHDC1-201ENST00000368287 C9orf131Q5VYM1 1079 aa5.7□□□□□ -1.5
ECHDC1-201ENST00000368287 LGI4Q8N135 537 aa5.7□□□□□ -1.5
ECHDC1-201ENST00000368287 ZBTB8AQ96BR9 441 aa5.7□□□□□ -1.5
ECHDC1-201ENST00000368287 RSRP1Q9BUV0 290 aa5.7□□□□□ -1.5
ECHDC1-201ENST00000368287 GGT7Q9UJ14 662 aa5.7□□□□□ -1.5
ECHDC1-201ENST00000368287 INVSQ9Y283 1065 aa5.7□□□□□ -1.5
ECHDC1-201ENST00000368287 SCAMP3O14828 347 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 SMARCA5O60264 1052 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 GSNP06396 782 aa5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 TCF3P15923 654 aa5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 GBP2P32456 591 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 ZNF76P36508 570 aa5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 KIAA2012Q0VF49 1180 aa5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 CDSNQ15517 529 aa5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 RGL3Q3MIN7 710 aa5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 OVOS1Q6IE37 1185 aa5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 BORAQ6PGQ7 559 aa5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 CYP2R1Q6VVX0 501 aa5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 LIMS2Q7Z4I7 341 aa5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 USP48Q86UV5 1035 aa5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 RHOVQ96L33 236 aa5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 DSCC1Q9BVC3 393 aa5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 SSBP3Q9BWW4 388 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms