RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 PNMA1Q8ND90 353 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 PHF20Q9BVI0 1012 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 TRIM7Q9C029 511 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 GUCA1BQ9UMX6 200 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 ZNF804BA4D1E1 1349 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 CCT6AP40227 531 aaKnown RBP8.06□□□□□ -1.12
VTA1-202ENST00000367630 MAP2K1Q02750 393 aaPredicted RBP8.06□□□□□ -1.12
VTA1-202ENST00000367630 CDAN1Q8IWY9 1227 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 CTNNBL1Q8WYA6 563 aaPredicted RBP8.06□□□□□ -1.12
VTA1-202ENST00000367630 ARID3AQ99856 593 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 BCL9LQ86UU0 1499 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 SSBP05455 408 aaKnown RBP eCLIP8.06□□□□□ -1.12
VTA1-202ENST00000367630 SMTNP53814 917 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 CCZ1BP86790 482 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 CCZ1P86791 482 aaPredicted RBP8.06□□□□□ -1.12
VTA1-202ENST00000367630 CAV1Q03135 178 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 RNASELQ05823 741 aaKnown RBP8.06□□□□□ -1.12
VTA1-202ENST00000367630 BIRC3Q13489 604 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 RPS6KA1Q15418 735 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 C6orf163Q5TEZ5 329 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 LRIG3Q6UXM1 1119 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 CHURC1Q8WUH1 139 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 ANKS1AQ92625 1134 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 WDR11Q9BZH6 1224 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 CYP19A1P11511 503 aaPredicted RBP8.06□□□□□ -1.12
VTA1-202ENST00000367630 FKBP3Q00688 224 aaKnown RBP8.06□□□□□ -1.12
VTA1-202ENST00000367630 CPLX3Q8WVH0 158 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 TUBB6Q9BUF5 446 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 GREM2Q9H772 168 aa8.06□□□□□ -1.12
VTA1-202ENST00000367630 GUF1Q8N442 669 aaKnown RBP8.05□□□□□ -1.12
VTA1-202ENST00000367630 MB21D1Q8N884 522 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 C7orf25Q9BPX7 421 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 VPS18Q9P253 973 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 FBXO2Q9UK22 296 aaPredicted RBP8.05□□□□□ -1.12
VTA1-202ENST00000367630 ACTN2P35609 894 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 CASP7P55210 303 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 MMRN2Q9H8L6 949 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 SAMD15Q9P1V8 674 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 CAPN11Q9UMQ6 739 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 STX8Q9UNK0 236 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 CALCOCO2Q13137 446 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 CCDC144CPQ8IYA2 1237 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 TMEM206Q9H813 350 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 MRPL11Q9Y3B7 192 aaKnown RBP8.05□□□□□ -1.12
VTA1-202ENST00000367630 MIF4GDA9UHW6 222 aaKnown RBP8.05□□□□□ -1.12
VTA1-202ENST00000367630 CCNT1O60563 726 aaKnown RBP8.05□□□□□ -1.12
VTA1-202ENST00000367630 ALDH3A1P30838 453 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 STAT1P42224 750 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 TEKT1Q969V4 418 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 SLC8A1P32418 973 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 MCAMP43121 646 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 SYCP3Q8IZU3 236 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 SNX29Q8TEQ0 813 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 LARP4BQ92615 738 aaKnown RBP8.05□□□□□ -1.12
VTA1-202ENST00000367630 MEGF6O75095 1541 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 COL5A2P05997 1499 aaPredicted RBP8.05□□□□□ -1.12
VTA1-202ENST00000367630 UBN2Q6ZU65 1347 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 PSMD14O00487 310 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 MPHOSPH10O00566 681 aaKnown RBP8.05□□□□□ -1.12
VTA1-202ENST00000367630 BUB1BO60566 1050 aaPredicted RBP8.05□□□□□ -1.12
VTA1-202ENST00000367630 CTDSPL2Q05D32 466 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 HLTFQ14527 1009 aaKnown RBP eCLIP8.05□□□□□ -1.12
VTA1-202ENST00000367630 OTUD6BQ8N6M0 293 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 LZTFL1Q9NQ48 299 aa8.05□□□□□ -1.12
VTA1-202ENST00000367630 ADAMTS7Q9UKP4 1686 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 PTGDRQ13258 359 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 GRAPQ13588 217 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 TERF2Q15554 542 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 GRAPLQ8TC17 118 aaPredicted RBP8.04□□□□□ -1.12
VTA1-202ENST00000367630 ZNF594Q96JF6 807 aaPredicted RBP8.04□□□□□ -1.12
VTA1-202ENST00000367630 FAM20AQ96MK3 541 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 FOXP3Q9BZS1 431 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 PPP1R1BQ9UD71 204 aaPredicted RBP8.04□□□□□ -1.12
VTA1-202ENST00000367630 LOC102724428A0A0B4J2F2 783 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 SMCO2A6NFE2 343 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 NDUFA10O95299 355 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 SIK1P57059 783 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 NR1H3Q13133 447 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 SLC10A5Q5PT55 438 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 SYDE1Q6ZW31 735 aaPredicted RBP8.04□□□□□ -1.12
VTA1-202ENST00000367630 BRINP3Q76B58 766 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 DYDC1Q8WWB3 177 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 TUBGCP2Q9BSJ2 902 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 AMFRQ9UKV5 643 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 ADAMTSL3P82987 1691 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 USP11P51784 963 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 TFAP4Q01664 338 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 C15orf52Q6ZUT6 534 aaKnown RBP8.04□□□□□ -1.12
VTA1-202ENST00000367630 FAM160B2Q86V87 743 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 IMPG2Q9BZV3 1241 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 ZC3H12CQ9C0D7 883 aaKnown RBP8.04□□□□□ -1.12
VTA1-202ENST00000367630 GOLPH3LQ9H4A5 285 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 BTBD18B2RXH4 712 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 RHOBTB3O94955 611 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 ADAMTS2O95450 1211 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 NOP2P46087 812 aaKnown RBP8.04□□□□□ -1.12
VTA1-202ENST00000367630 MAP3K9P80192 1104 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 LONRF2Q1L5Z9 754 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 KLHDC4Q8TBB5 520 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 IGDCC4Q8TDY8 1250 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms