RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 MBD3O95983 291 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 CPXCR1Q8N123 301 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 PGBD1Q96JS3 809 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 AMNQ9BXJ7 453 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 BIN2Q9UBW5 565 aaPredicted RBP14□□□□□ -0.17
CAPN9-203ENST00000366666 PCDHA6Q9UN73 950 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 PCDHA8Q9Y5H6 950 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 ATP6V1DQ9Y5K8 247 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 MYH7BA7E2Y1 1941 aa14□□□□□ -0.17
CAPN9-203ENST00000366666 USP17L15C9J2P7 530 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 USP17L13C9JLJ4 530 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 USP17L11C9JVI0 530 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 USP17L18D6R9N7 530 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 USP17L22D6RA61 530 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 USP17L17D6RBQ6 530 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 USP17L19D6RCP7 530 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 USP17L20D6RJB6 530 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 HUNKP57058 714 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 FKBP1BP68106 108 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 USP17L24Q0WX57 530 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 USP17L6PQ6QN14 398 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 LRSAM1Q6UWE0 723 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 PIK3AP1Q6ZUJ8 805 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 BRAPQ7Z569 592 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 CCDC148Q8NFR7 591 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 TBC1D5Q92609 795 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 P2RX7Q99572 595 aaKnown RBP13.99□□□□□ -0.17
CAPN9-203ENST00000366666 RAVER2Q9HCJ3 691 aaKnown RBP13.99□□□□□ -0.17
CAPN9-203ENST00000366666 VWA5AO00534 786 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 CXCL11O14625 94 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 GADD45BO75293 160 aaPredicted RBP13.99□□□□□ -0.17
CAPN9-203ENST00000366666 ATP2B1P20020 1258 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 JAKMIP3Q5VZ66 844 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 DAGLBQ8NCG7 672 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 GPT2Q8TD30 523 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 MS4A4AQ96JQ5 239 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 SLC38A10Q9HBR0 1119 aa13.99□□□□□ -0.17
CAPN9-203ENST00000366666 SPDYE16A6NNV3 312 aaPredicted RBP13.98□□□□□ -0.17
CAPN9-203ENST00000366666 CALML3P27482 149 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 DSG3P32926 999 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 KRT85P78386 507 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 COG2Q14746 738 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 GPAT2Q6NUI2 795 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 SMAP1Q8IYB5 467 aaPredicted RBP13.98□□□□□ -0.17
CAPN9-203ENST00000366666 ESYT2A0FGR8 921 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 hCG_1984214I3L0E3 225 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 MEIS2O14770 477 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 ADCY7P51828 1080 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 SAPCD2Q86UD0 394 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 ZNF713Q8N859 430 aaPredicted RBP13.98□□□□□ -0.17
CAPN9-203ENST00000366666 REPS2Q8NFH8 660 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 LEO1Q8WVC0 666 aaPredicted RBP13.98□□□□□ -0.17
CAPN9-203ENST00000366666 PSTPIP2Q9H939 334 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 C6orf50Q9HD87 102 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 RIC8AQ9NPQ8 531 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 RIPK3Q9Y572 518 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 PCDHB6Q9Y5E3 794 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 MRVI1Q9Y6F6 885 aa13.98□□□□□ -0.17
CAPN9-203ENST00000366666 MTERF4Q7Z6M4 381 aaKnown RBP13.97□□□□□ -0.17
CAPN9-203ENST00000366666 ZNF784Q8NCA9 323 aaPredicted RBP13.97□□□□□ -0.17
CAPN9-203ENST00000366666 PROCA1Q8NCQ7 364 aaPredicted RBP13.97□□□□□ -0.17
CAPN9-203ENST00000366666 CCDC12Q8WUD4 166 aaPredicted RBP13.97□□□□□ -0.17
CAPN9-203ENST00000366666 BRMS1Q9HCU9 246 aa13.97□□□□□ -0.17
CAPN9-203ENST00000366666 HOMER2Q9NSB8 354 aa13.97□□□□□ -0.17
CAPN9-203ENST00000366666 ADAMTS5Q9UNA0 930 aa13.97□□□□□ -0.17
CAPN9-203ENST00000366666 A0A0G2JMZ2 1700 aa13.97□□□□□ -0.17
CAPN9-203ENST00000366666 EDIL3O43854 480 aa13.96□□□□□ -0.17
CAPN9-203ENST00000366666 ICAM1P05362 532 aa13.96□□□□□ -0.17
CAPN9-203ENST00000366666 GNA11P29992 359 aa13.96□□□□□ -0.17
CAPN9-203ENST00000366666 HOXA13P31271 388 aaPredicted RBP13.96□□□□□ -0.17
CAPN9-203ENST00000366666 CLK2P49760 499 aaKnown RBP13.96□□□□□ -0.17
CAPN9-203ENST00000366666 TMEM132BQ14DG7 1078 aa13.96□□□□□ -0.17
CAPN9-203ENST00000366666 SF3A1Q15459 793 aaKnown RBP13.96□□□□□ -0.17
CAPN9-203ENST00000366666 INF2Q27J81 1249 aa13.96□□□□□ -0.17
CAPN9-203ENST00000366666 MUM1L1Q5H9M0 696 aa13.96□□□□□ -0.17
CAPN9-203ENST00000366666 SPRYD7Q5W111 196 aa13.96□□□□□ -0.17
CAPN9-203ENST00000366666 REXO1Q8N1G1 1221 aaKnown RBP13.96□□□□□ -0.17
CAPN9-203ENST00000366666 ASCC2Q9H1I8 757 aaPredicted RBP13.96□□□□□ -0.17
CAPN9-203ENST00000366666 ZNF214Q9UL59 606 aaPredicted RBP13.96□□□□□ -0.17
CAPN9-203ENST00000366666 CCPG1Q9ULG6 757 aa13.96□□□□□ -0.17
CAPN9-203ENST00000366666 AGTPBP1Q9UPW5 1226 aa13.96□□□□□ -0.17
CAPN9-203ENST00000366666 UNCXA6NJT0 531 aa13.96□□□□□ -0.18
CAPN9-203ENST00000366666 NFIBO00712 420 aa13.96□□□□□ -0.18
CAPN9-203ENST00000366666 YY1P25490 414 aa13.96□□□□□ -0.18
CAPN9-203ENST00000366666 HOXA7P31268 230 aaPredicted RBP13.96□□□□□ -0.18
CAPN9-203ENST00000366666 SNAPC2Q13487 334 aa13.96□□□□□ -0.18
CAPN9-203ENST00000366666 CSPP1Q1MSJ5 1256 aa13.96□□□□□ -0.18
CAPN9-203ENST00000366666 PPP1R18Q6NYC8 613 aa13.96□□□□□ -0.18
CAPN9-203ENST00000366666 SMC1BQ8NDV3 1235 aa13.96□□□□□ -0.18
CAPN9-203ENST00000366666 R3HDMLQ9H3Y0 253 aa13.96□□□□□ -0.18
CAPN9-203ENST00000366666 ALAS1P13196 640 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 ANO1Q5XXA6 986 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 GALNT17Q6IS24 598 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 BRI3BPQ8WY22 251 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 CUL5Q93034 780 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 SPATA32Q96LK8 384 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 BTBD7Q9P203 1132 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 RBBP6Q7Z6E9 1792 aaKnown RBP13.95□□□□□ -0.18
CAPN9-203ENST00000366666 TOMM70O94826 608 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 CYP2C8P10632 490 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms