RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 GALNT18Q6P9A2 607 aa5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 CYP2R1Q6VVX0 501 aa5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 COPS5Q92905 334 aa5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 NBPF4Q96M43 638 aa5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 DNAJC2Q99543 621 aaKnown RBP5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 HIRIP3Q9BW71 556 aaPredicted RBP5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 EPN3Q9H201 632 aa5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 NKX2-4Q9H2Z4 354 aa5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 CWC22Q9HCG8 908 aaKnown RBP5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 IMPACTQ9P2X3 320 aa5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 U2SURPO15042 1029 aaKnown RBP5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 TBC1D8O95759 1140 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 CAPNS1P04632 268 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 THBDP07204 575 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 MSL3P1P0C860 447 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 PRKCAP17252 672 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 SDHBP21912 280 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 GRIA2P42262 883 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 OGFOD2Q6N063 350 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 JAMLQ86YT9 394 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 KSR1Q8IVT5 923 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 INTS4Q96HW7 963 aaKnown RBP5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 DIRC2Q96SL1 478 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 CYP26B1Q9NR63 512 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 CLEC1BQ9P126 229 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 SIRPGQ9P1W8 387 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 ACSL6Q9UKU0 697 aa5.02□□□□□ -1.61
RNU4-48P-201ENST00000365559 PDPK1O15530 556 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 SNRPB2P08579 225 aaKnown RBP5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 PLS3P13797 630 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 PPP2R2AP63151 447 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 MVKQ03426 396 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 LAPTM5Q13571 262 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 PRSS53Q2L4Q9 553 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 MBLAC2Q68D91 279 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 SPATC1Q76KD6 591 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 CPNE8Q86YQ8 564 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 NUP43Q8NFH3 380 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 ST13P5Q8NFI4 369 aaPredicted RBP5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 NPLOC4Q8TAT6 608 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 PMFBP1Q8TBY8 1022 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 FRS2Q8WU20 508 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 SLC6A17Q9H1V8 727 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 NSUN3Q9H649 340 aaKnown RBP5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 CRTAC1Q9NQ79 661 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 FAM53CQ9NYF3 392 aa5.01□□□□□ -1.61
RNU4-48P-201ENST00000365559 NPHP3-ACAD11A0A0J9YXS1 232 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 FAM221BA6H8Z2 402 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 AGRPO00253 132 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 ARNTLO00327 626 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 PPP1R11O60927 126 aaPredicted RBP5□□□□□ -1.61
RNU4-48P-201ENST00000365559 SCG5P05408 212 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 PNLIPP16233 465 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 PAMP19021 973 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 HOXC12P31275 282 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 L1CAMP32004 1257 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 PDE6BP35913 854 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 ECI1P42126 302 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 GFRA1P56159 465 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 CYP4F8P98187 520 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 ADGRF1Q5T601 910 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 ZNF648Q5T619 568 aaPredicted RBP5□□□□□ -1.61
RNU4-48P-201ENST00000365559 CCDC113Q9H0I3 377 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 ARHGEF4Q9NR80 690 aa5□□□□□ -1.61
RNU4-48P-201ENST00000365559 A0A1W2PQ27 194 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 A0A1W2PQ64 194 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 A0A1W2PQC6 194 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 A0A1W2PQD8 194 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 TACR1P25103 407 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 KCNJ6P48051 423 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 ERVFRD-1P60508 538 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 MESP2Q0VG99 397 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 RASGRF1Q13972 1273 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 RASA3Q14644 834 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 DENND5AQ6IQ26 1287 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 IRF2BP1Q8IU81 584 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 CCDC103Q8IW40 242 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 POU5F2Q8N7G0 328 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 TMEM145Q8NBT3 493 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 KREMEN2Q8NCW0 462 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 C1orf159Q96HA4 380 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 SGSM3Q96HU1 749 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 DRC1Q96MC2 740 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 DCP1AQ9NPI6 582 aaPredicted RBP4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 FBLN5Q9UBX5 448 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 PFDN2Q9UHV9 154 aa4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 TMEFF2Q9UIK5 374 aaPredicted RBP4.99□□□□□ -1.61
RNU4-48P-201ENST00000365559 TRBV23OR9-2A0A075B6M9 112 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 C7orf72A4D263 438 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 OR14I1A6ND48 311 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 DIAPH1O60610 1272 aaKnown RBP4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 ARL4AP40617 200 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 INF2Q27J81 1249 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 MTERF2Q49AM1 385 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 YOD1Q5VVQ6 348 aaPredicted RBP4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 ZNF605Q86T29 641 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 NLGN2Q8NFZ4 835 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 ZNF669Q96BR6 464 aaPredicted RBP4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 CCDC140Q96MF4 163 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms