RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 GPCPD1Q9NPB8 672 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 KCNQ5Q9NR82 932 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 MAPK8IP1Q9UQF2 711 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 SCN7AQ01118 1682 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 PPP1R3GB7ZBB8 358 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 NMT2O60551 498 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 BBOX1O75936 387 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 CDKAL1Q5VV42 579 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 SPATA1Q5VX52 437 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 MIGA2Q7L4E1 593 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 CEP112Q8N8E3 955 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 PAGE5Q96GU1 130 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 CTNND2Q9UQB3 1225 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 REXO2Q9Y3B8 237 aaKnown RBP10.19□□□□□ -0.78
TOP1-201ENST00000361337 EP400Q96L91 3159 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 BAZ2BQ9UIF8 2168 aaKnown RBP10.19□□□□□ -0.78
TOP1-201ENST00000361337 BCL9LQ86UU0 1499 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 TCRBV5S4A2TA0A5A2 114 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 RC3H1Q5TC82 1133 aaKnown RBP10.19□□□□□ -0.78
TOP1-201ENST00000361337 LRCH2Q5VUJ6 765 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 PACS2Q86VP3 889 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 SYMPKQ92797 1274 aaKnown RBP10.19□□□□□ -0.78
TOP1-201ENST00000361337 FAM204AQ9H8W3 233 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 HOOK1Q9UJC3 728 aaKnown RBP10.19□□□□□ -0.78
TOP1-201ENST00000361337 SRPRBQ9Y5M8 271 aaKnown RBP10.19□□□□□ -0.78
TOP1-201ENST00000361337 CDHR2Q9BYE9 1310 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 IFNAR1P17181 557 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 ATP2B4P23634 1241 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 RTN1Q16799 776 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 IQUBQ8NA54 791 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 TAB2Q9NYJ8 693 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 VPS54Q9P1Q0 977 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 MYO5AQ9Y4I1 1855 aaKnown RBP10.18□□□□□ -0.78
TOP1-201ENST00000361337 ERCC5P28715 1186 aaPredicted RBP10.18□□□□□ -0.78
TOP1-201ENST00000361337 AMPD2Q01433 879 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 PPARAQ07869 468 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 PRAMEF18Q5VWM3 479 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 TMEM87BQ96K49 555 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 JPH2Q9BR39 696 aaPredicted RBP10.18□□□□□ -0.78
TOP1-201ENST00000361337 CTAGE15A4D2H0 777 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 KIF4AO95239 1232 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 SYF2O95926 243 aaKnown RBP10.18□□□□□ -0.78
TOP1-201ENST00000361337 HLA-DOAP06340 250 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 CTAGE8P0CG41 777 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 XBP1P17861 261 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 NLRP5P59047 1200 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 BIRC2Q13490 618 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 KRT31Q15323 416 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 CTAGE6Q86UF2 777 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 CLEC10AQ8IUN9 316 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 CTAGE4Q8IX94 777 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 TTLL6Q8N841 843 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 NAPGQ99747 312 aaPredicted RBP10.18□□□□□ -0.78
TOP1-201ENST00000361337 ABHD10Q9NUJ1 306 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 DACH1Q9UI36 760 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 GUCA1BQ9UMX6 200 aa10.18□□□□□ -0.78
TOP1-201ENST00000361337 V9GY48 417 aaPredicted RBP10.18□□□□□ -0.78
TOP1-201ENST00000361337 ADAMTS3O15072 1205 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 RILPL1Q5EBL4 403 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 HEATR3Q7Z4Q2 680 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 SPICE1Q8N0Z3 855 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 LRRC47Q8N1G4 583 aaKnown RBP10.17□□□□□ -0.78
TOP1-201ENST00000361337 CNKSR1Q969H4 720 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 MASTLQ96GX5 879 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 EFCC1Q9HA90 598 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 CNTNAP4Q9C0A0 1308 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 EIF3CLB5ME19 914 aaKnown RBP10.17□□□□□ -0.78
TOP1-201ENST00000361337 EBAG9O00559 213 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 MYBL2P10244 700 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 GSTO1P78417 241 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 TSR1Q2NL82 804 aaKnown RBP10.17□□□□□ -0.78
TOP1-201ENST00000361337 CCDC70Q6NSX1 233 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 SLF2Q8IX21 1173 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 ELOA2Q8IYF1 753 aaPredicted RBP10.17□□□□□ -0.78
TOP1-201ENST00000361337 SH3RF3Q8TEJ3 882 aaPredicted RBP10.17□□□□□ -0.78
TOP1-201ENST00000361337 PPM1EQ8WY54 764 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 EEF2KMTQ96G04 330 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 CAPZA3Q96KX2 299 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 MMS19Q96T76 1030 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 EIF3CQ99613 913 aaKnown RBP10.17□□□□□ -0.78
TOP1-201ENST00000361337 MTRQ99707 1265 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 TDRD3Q9H7E2 651 aaKnown RBP10.17□□□□□ -0.78
TOP1-201ENST00000361337 USP17L3A6NCW0 530 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 USP17L4A6NCW7 530 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 RNF40O75150 1001 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 NPR1P16066 1061 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 MRPS25P82663 173 aaKnown RBP10.17□□□□□ -0.78
TOP1-201ENST00000361337 SF3B3Q15393 1217 aaKnown RBP10.17□□□□□ -0.78
TOP1-201ENST00000361337 ZNF174Q15697 407 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 AKNAD1Q5T1N1 836 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 USP17L1Q7RTZ2 530 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 NIM1KQ8IY84 436 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 TRIML1Q8N9V2 468 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 TBC1D16Q8TBP0 767 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 NUP88Q99567 741 aaPredicted RBP10.17□□□□□ -0.78
TOP1-201ENST00000361337 UBA5Q9GZZ9 404 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 FOXP1Q9H334 677 aaPredicted RBP10.17□□□□□ -0.78
TOP1-201ENST00000361337 POLLQ9UGP5 575 aa10.17□□□□□ -0.78
TOP1-201ENST00000361337 N4BP3O15049 544 aa10.16□□□□□ -0.78
TOP1-201ENST00000361337 ERLIN2O94905 339 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms