RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 SETDB2Q96T68 719 aa15.32■□□□□ 0.04
SMC5-201ENST00000361138 ADORA1P30542 326 aa15.32■□□□□ 0.04
SMC5-201ENST00000361138 ADAT2Q7Z6V5 191 aaKnown RBP15.32■□□□□ 0.04
SMC5-201ENST00000361138 GRK7Q8WTQ7 553 aa15.32■□□□□ 0.04
SMC5-201ENST00000361138 ZNF622Q969S3 477 aaKnown RBP eCLIP15.32■□□□□ 0.046e-7■■■□□ 17.5
SMC5-201ENST00000361138 ADGRG1Q9Y653 693 aa15.32■□□□□ 0.04
SMC5-201ENST00000361138 TRIM66O15016 1216 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 ANKRD20A3Q5VUR7 823 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 GALNT17Q6IS24 598 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 PHLDB3Q6NSJ2 640 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 CABLES1Q8TDN4 633 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 AIFM3Q96NN9 605 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 MAK16Q9BXY0 300 aaKnown RBP15.31■□□□□ 0.04
SMC5-201ENST00000361138 VPS37BQ9H9H4 285 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 TPX2Q9ULW0 747 aaKnown RBP15.31■□□□□ 0.04
SMC5-201ENST00000361138 SH3BGRP55822 239 aaPredicted RBP15.31■□□□□ 0.04
SMC5-201ENST00000361138 SESN3P58005 492 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 REXO1Q8N1G1 1221 aaKnown RBP15.31■□□□□ 0.04
SMC5-201ENST00000361138 NYXQ9GZU5 481 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 NFU1Q9UMS0 254 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 CTNND1O60716 968 aaKnown RBP15.31■□□□□ 0.04
SMC5-201ENST00000361138 GLE1Q53GS7 698 aaKnown RBP15.31■□□□□ 0.04
SMC5-201ENST00000361138 NOVA2Q9UNW9 492 aaKnown RBP15.31■□□□□ 0.04
SMC5-201ENST00000361138 GAS8O95995 478 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 EIF4A3P38919 411 aaKnown RBP15.31■□□□□ 0.04
SMC5-201ENST00000361138 CTSWP56202 376 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 NR5A1Q13285 461 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 ARHGAP44Q17R89 818 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 P3H4Q92791 437 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 PSD3Q9NYI0 1048 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 PLAAQ9Y263 795 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 F8W031 263 aaPredicted RBP15.31■□□□□ 0.04
SMC5-201ENST00000361138 FTCDO95954 541 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 USP14P54578 494 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 MAP7D1Q3KQU3 841 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 WDR44Q5JSH3 913 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 GPKOWQ92917 476 aaPredicted RBP eCLIP15.31■□□□□ 0.04
SMC5-201ENST00000361138 OSBP2Q969R2 916 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 PBKQ96KB5 322 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 C8orf37Q96NL8 207 aa15.31■□□□□ 0.04
SMC5-201ENST00000361138 IFNAR2P48551 515 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 ARPP21Q9UBL0 812 aaPredicted RBP15.3■□□□□ 0.04
SMC5-201ENST00000361138 LAD1O00515 517 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.3■□□□□ 0.04
SMC5-201ENST00000361138 EEF2KMTQ96G04 330 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 TXNDC16Q9P2K2 825 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 BZW2Q9Y6E2 419 aaKnown RBP15.3■□□□□ 0.04
SMC5-201ENST00000361138 PGRMC1O00264 195 aaKnown RBP15.3■□□□□ 0.04
SMC5-201ENST00000361138 GPBP1Q86WP2 473 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 MYCT1Q8N699 235 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 GLT8D2Q9H1C3 349 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 GLI2P10070 1586 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 THAP12O43422 761 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 MYL1P05976 194 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 H2AFZP0C0S5 128 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 HIBADHP31937 336 aaKnown RBP15.3■□□□□ 0.04
SMC5-201ENST00000361138 KIF11P52732 1056 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 TFAP4Q01664 338 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 MUM1L1Q5H9M0 696 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 H2AFVQ71UI9 128 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 RUNDC3BQ96NL0 473 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 ATP8A1Q9Y2Q0 1164 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 ABCA6Q8N139 1617 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 TXNDC9O14530 226 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 KIF1CO43896 1103 aaKnown RBP15.3■□□□□ 0.04
SMC5-201ENST00000361138 EPSTI1Q96J88 318 aa15.3■□□□□ 0.04
SMC5-201ENST00000361138 LOC102724159A0A0B4J2E5 919 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 CHMP2AO43633 222 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 PWP2Q15269 919 aaKnown RBP15.29■□□□□ 0.04
SMC5-201ENST00000361138 MAN2A1Q16706 1144 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 TYW1Q9NV66 732 aaKnown RBP15.29■□□□□ 0.04
SMC5-201ENST00000361138 FAM170AA1A519 330 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 TCIRG1Q13488 830 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 CUL1Q13616 776 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 NAA35Q5VZE5 725 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 ZNF526Q8TF50 670 aaPredicted RBP15.29■□□□□ 0.04
SMC5-201ENST00000361138 SDR42E1Q8WUS8 393 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 PUS7LQ9H0K6 701 aaKnown RBP15.29■□□□□ 0.04
SMC5-201ENST00000361138 TARSL2A2RTX5 802 aaKnown RBP15.29■□□□□ 0.04
SMC5-201ENST00000361138 TRIM37O94972 964 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 PRR29P0C7W0 189 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 ADCY8P40145 1251 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 DHX9Q08211 1270 aaKnown RBP15.29■□□□□ 0.04
SMC5-201ENST00000361138 HIBCHQ6NVY1 386 aaPredicted RBP15.29■□□□□ 0.04
SMC5-201ENST00000361138 CCHCR1Q8TD31 782 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 ZBTB21Q9ULJ3 1066 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 PASKQ96RG2 1323 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 ANO9A1A5B4 782 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 CYP27A1Q02318 531 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 NEK8Q86SG6 692 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 RAB3IL1Q8TBN0 382 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 PUS3Q9BZE2 481 aaKnown RBP15.29■□□□□ 0.04
SMC5-201ENST00000361138 MAP7Q14244 749 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 TAF11Q15544 211 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 TEX11Q8IYF3 940 aa15.29■□□□□ 0.04
SMC5-201ENST00000361138 ADD2P35612 726 aa15.28■□□□□ 0.04
SMC5-201ENST00000361138 VSNL1P62760 191 aa15.28■□□□□ 0.04
SMC5-201ENST00000361138 PTPN12Q05209 780 aaKnown RBP15.28■□□□□ 0.04
SMC5-201ENST00000361138 MSANTD4Q8NCY6 345 aa15.28■□□□□ 0.04
SMC5-201ENST00000361138 KLHL29Q96CT2 875 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms