RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 GREB1LQ9C091 1923 aaPredicted RBP29.63■■■□□ 2.33
CUEDC1-201ENST00000360238 IGKV6D-41A0A0C4DH26 115 aa29.63■■■□□ 2.33
CUEDC1-201ENST00000360238 TBCKQ8TEA7 893 aa29.63■■■□□ 2.33
CUEDC1-201ENST00000360238 ATP6V0A2Q9Y487 856 aa29.63■■■□□ 2.33
CUEDC1-201ENST00000360238 TRIM49BA6NDI0 452 aa29.62■■■□□ 2.33
CUEDC1-201ENST00000360238 SNHG28P0DPA3 235 aa29.62■■■□□ 2.33
CUEDC1-201ENST00000360238 PRKCSHP14314 528 aaPredicted RBP29.62■■■□□ 2.33
CUEDC1-201ENST00000360238 DHTKD1Q96HY7 919 aaPredicted RBP29.62■■■□□ 2.33
CUEDC1-201ENST00000360238 PLIN2Q99541 437 aa29.62■■■□□ 2.33
CUEDC1-201ENST00000360238 VAT1LQ9HCJ6 419 aa29.62■■■□□ 2.33
CUEDC1-201ENST00000360238 TTF2Q9UNY4 1162 aaKnown RBP29.62■■■□□ 2.33
CUEDC1-201ENST00000360238 LGALS16A8MUM7 142 aa29.61■■■□□ 2.33
CUEDC1-201ENST00000360238 PPP1R2P41236 205 aa29.61■■■□□ 2.33
CUEDC1-201ENST00000360238 NUP88Q99567 741 aaPredicted RBP29.61■■■□□ 2.33
CUEDC1-201ENST00000360238 C7orf25Q9BPX7 421 aa29.61■■■□□ 2.33
CUEDC1-201ENST00000360238 TRIM9Q9C026 710 aa29.61■■■□□ 2.33
CUEDC1-201ENST00000360238 SWAP70Q9UH65 585 aa29.61■■■□□ 2.33
CUEDC1-201ENST00000360238 A0A1W2PQC6 194 aa29.6■■■□□ 2.33
CUEDC1-201ENST00000360238 UBXN1Q04323 297 aa29.6■■■□□ 2.33
CUEDC1-201ENST00000360238 CYP26C1Q6V0L0 522 aa29.6■■■□□ 2.33
CUEDC1-201ENST00000360238 UBA5Q9GZZ9 404 aa29.6■■■□□ 2.33
CUEDC1-201ENST00000360238 PMS1P54277 932 aaKnown RBP29.6■■■□□ 2.33
CUEDC1-201ENST00000360238 PICALMQ13492 652 aa29.6■■■□□ 2.33
CUEDC1-201ENST00000360238 TTI2Q6NXR4 508 aa29.6■■■□□ 2.33
CUEDC1-201ENST00000360238 TRIM47Q96LD4 638 aa29.6■■■□□ 2.33
CUEDC1-201ENST00000360238 FAM53CQ9NYF3 392 aa29.6■■■□□ 2.33
CUEDC1-201ENST00000360238 KIF5CO60282 957 aa29.59■■■□□ 2.33
CUEDC1-201ENST00000360238 PPP1R18Q6NYC8 613 aa29.59■■■□□ 2.33
CUEDC1-201ENST00000360238 ARGLU1Q9NWB6 273 aaPredicted RBP29.59■■■□□ 2.33
CUEDC1-201ENST00000360238 BIN2Q9UBW5 565 aaPredicted RBP29.59■■■□□ 2.33
CUEDC1-201ENST00000360238 MYH4Q9Y623 1939 aa29.59■■■□□ 2.33
CUEDC1-201ENST00000360238 AKR1B1P15121 316 aa29.59■■■□□ 2.33
CUEDC1-201ENST00000360238 ADCY7P51828 1080 aa29.59■■■□□ 2.33
CUEDC1-201ENST00000360238 AMPD3Q01432 767 aa29.59■■■□□ 2.33
CUEDC1-201ENST00000360238 LZTFL1Q9NQ48 299 aa29.59■■■□□ 2.33
CUEDC1-201ENST00000360238 BRWD3Q6RI45 1802 aa29.58■■■□□ 2.33
CUEDC1-201ENST00000360238 FRMPD2Q68DX3 1309 aaPredicted RBP29.58■■■□□ 2.33
CUEDC1-201ENST00000360238 HMGB2P26583 209 aaKnown RBP29.58■■■□□ 2.33
CUEDC1-201ENST00000360238 ERVK-24P63145 666 aa29.58■■■□□ 2.33
CUEDC1-201ENST00000360238 PPP2R3AQ06190 1150 aa29.58■■■□□ 2.33
CUEDC1-201ENST00000360238 JAKMIP3Q5VZ66 844 aa29.58■■■□□ 2.33
CUEDC1-201ENST00000360238 MB21D1Q8N884 522 aa29.58■■■□□ 2.33
CUEDC1-201ENST00000360238 CALML4Q96GE6 196 aa29.58■■■□□ 2.33
CUEDC1-201ENST00000360238 EXOC1Q9NV70 894 aa29.58■■■□□ 2.33
CUEDC1-201ENST00000360238 MAGEC2Q9UBF1 373 aaPredicted RBP29.58■■■□□ 2.33
CUEDC1-201ENST00000360238 ADAMTSL1Q8N6G6 1762 aa29.58■■■□□ 2.33
CUEDC1-201ENST00000360238 BICDL2A1A5D9 508 aa29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 ZSCAN20P17040 1043 aaPredicted RBP29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 TECP42680 631 aa29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 COBLL1Q53SF7 1204 aa29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 POTEDQ86YR6 584 aa29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 ZNF446Q9NWS9 450 aa29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 CLCN6P51797 869 aa29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 DPP8Q6V1X1 898 aaPredicted RBP29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 CREBRFQ8IUR6 639 aa29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 KRT222Q8N1A0 295 aa29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 LRRC47Q8N1G4 583 aaKnown RBP29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 ZNF507Q8TCN5 953 aa29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 MTMR9Q96QG7 549 aa29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 MMTAG2Q9BU76 263 aaKnown RBP29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 SERPINB13Q9UIV8 391 aa29.57■■■□□ 2.32
CUEDC1-201ENST00000360238 RIMBP2O15034 1052 aa29.56■■■□□ 2.32
CUEDC1-201ENST00000360238 TTLL1O95922 423 aa29.56■■■□□ 2.32
CUEDC1-201ENST00000360238 KRT9P35527 623 aa29.56■■■□□ 2.32
CUEDC1-201ENST00000360238 FXR2P51116 673 aaKnown RBP eCLIP29.56■■■□□ 2.32
CUEDC1-201ENST00000360238 CERS5Q8N5B7 392 aa29.56■■■□□ 2.32
CUEDC1-201ENST00000360238 DDX4Q9NQI0 724 aaKnown RBP29.56■■■□□ 2.32
CUEDC1-201ENST00000360238 CCNE1P24864 410 aa29.56■■■□□ 2.32
CUEDC1-201ENST00000360238 ASIC1P78348 528 aa29.56■■■□□ 2.32
CUEDC1-201ENST00000360238 PDE4DQ08499 809 aa29.56■■■□□ 2.32
CUEDC1-201ENST00000360238 TMEM260Q9NX78 707 aa29.56■■■□□ 2.32
CUEDC1-201ENST00000360238 RNF225M0QZC1 329 aaPredicted RBP29.55■■■□□ 2.32
CUEDC1-201ENST00000360238 P2RX5Q93086 422 aa29.55■■■□□ 2.32
CUEDC1-201ENST00000360238 ZC3H12CQ9C0D7 883 aaKnown RBP29.55■■■□□ 2.32
CUEDC1-201ENST00000360238 PRDM10Q9NQV6 1147 aa29.55■■■□□ 2.32
CUEDC1-201ENST00000360238 STK17AQ9UEE5 414 aa29.55■■■□□ 2.32
CUEDC1-201ENST00000360238 ZNF543Q08ER8 600 aa29.54■■■□□ 2.32
CUEDC1-201ENST00000360238 CALCRLQ16602 461 aa29.54■■■□□ 2.32
CUEDC1-201ENST00000360238 DUSP9Q99956 384 aaKnown RBP29.54■■■□□ 2.32
CUEDC1-201ENST00000360238 IRX2Q9BZI1 471 aaPredicted RBP29.54■■■□□ 2.32
CUEDC1-201ENST00000360238 DNM2P50570 870 aa29.54■■■□□ 2.32
CUEDC1-201ENST00000360238 TUBB2AQ13885 445 aa29.54■■■□□ 2.32
CUEDC1-201ENST00000360238 RSRC2Q7L4I2 434 aaKnown RBP29.54■■■□□ 2.32
CUEDC1-201ENST00000360238 FAM114A1Q8IWE2 563 aa29.54■■■□□ 2.32
CUEDC1-201ENST00000360238 CSGALNACT2Q8N6G5 542 aa29.54■■■□□ 2.32
CUEDC1-201ENST00000360238 TUBB2BQ9BVA1 445 aa29.54■■■□□ 2.32
CUEDC1-201ENST00000360238 COL11A2P13942 1736 aaPredicted RBP29.54■■■□□ 2.32
CUEDC1-201ENST00000360238 TMEM266Q2M3C6 531 aa29.53■■■□□ 2.32
CUEDC1-201ENST00000360238 CNNM4Q6P4Q7 775 aa29.53■■■□□ 2.32
CUEDC1-201ENST00000360238 ACRBPQ8NEB7 543 aa29.53■■■□□ 2.32
CUEDC1-201ENST00000360238 DNAJC7Q99615 494 aa29.53■■■□□ 2.32
CUEDC1-201ENST00000360238 MYO1AQ9UBC5 1043 aa29.53■■■□□ 2.32
CUEDC1-201ENST00000360238 PNMA6FA0A0J9YX94 578 aa29.53■■■□□ 2.32
CUEDC1-201ENST00000360238 F8W031 263 aaPredicted RBP29.53■■■□□ 2.32
CUEDC1-201ENST00000360238 GPR161Q8N6U8 529 aaKnown RBP29.53■■■□□ 2.32
CUEDC1-201ENST00000360238 COA7Q96BR5 231 aa29.53■■■□□ 2.32
CUEDC1-201ENST00000360238 USP40Q9NVE5 1235 aa29.53■■■□□ 2.32
CUEDC1-201ENST00000360238 SRGNP10124 158 aa29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 NPR1P16066 1061 aa29.52■■■□□ 2.32
CUEDC1-201ENST00000360238 DMTNQ08495 405 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms