RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 PAIP2BQ9ULR5 123 aaKnown RBP18.83■□□□□ 0.6
CACNA1A-201ENST00000360228 FAM133BQ5BKY9 247 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 ARHGEF16Q5VV41 709 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 METTL14Q9HCE5 456 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 LMCD1Q9NZU5 365 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 TMEM247A6NEH6 219 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 POLR2BP30876 1174 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 KLHL29Q96CT2 875 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 RBM17Q96I25 401 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 SLC4A7Q9Y6M7 1214 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 RNASELQ05823 741 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 KRT28Q7Z3Y7 464 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 HINFPQ9BQA5 517 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 JPH2Q9BR39 696 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 NCOA5Q9HCD5 579 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 TFCP2L1Q9NZI6 479 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 MRPS15P82914 257 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 LRWD1Q9UFC0 647 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 IRS4O14654 1257 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 TOM1L1O75674 476 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 SERPINI1Q99574 410 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 TRAIPQ9BWF2 469 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 STRIP2Q9ULQ0 834 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 PACSIN2Q9UNF0 486 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 FNDC3AQ9Y2H6 1198 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 KIF19Q2TAC6 998 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 IQCDQ96DY2 449 aa18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 LLPHQ9BRT6 129 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-201ENST00000360228 KDM2BQ8NHM5 1336 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 RALGAPBQ86X10 1494 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 SLC39A6Q13433 755 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 CAPRIN1Q14444 709 aaKnown RBP18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 MIS12Q9H081 205 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 PHF8Q9UPP1 1060 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 TROQ12816 1431 aaPredicted RBP18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 TIAM1Q13009 1591 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 ADCY1Q08828 1119 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 TAF11Q15544 211 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 ZCRB1Q8TBF4 217 aaKnown RBP18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 HOOK2Q96ED9 719 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 DENND2AQ9ULE3 1009 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 ZBED4O75132 1171 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 GSDMAQ96QA5 445 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 HYOU1Q9Y4L1 999 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 DESI2Q9BSY9 194 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 TTI1O43156 1089 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 EFCAB14O75071 495 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 PDE11AQ9HCR9 933 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 PSDA5PKW4 1024 aaPredicted RBP18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 GUCY2DQ02846 1103 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 NLRX1Q86UT6 975 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 DNAAF3Q8N9W5 541 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 SMCR8Q8TEV9 937 aaPredicted RBP18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 ZFYVE1Q9HBF4 777 aa18.81■□□□□ 0.6
CACNA1A-201ENST00000360228 CSPG5O95196 566 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 YWHAHQ04917 246 aaPredicted RBP18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 EIF3CLB5ME19 914 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 KRT4P19013 534 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 OCRLQ01968 901 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 ZNF653Q96CK0 615 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 EIF3CQ99613 913 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 NFKBIL1Q9UBC1 381 aaPredicted RBP18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 KRT75O95678 551 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 MORC3Q14149 939 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 CABP7Q86V35 215 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 GDAP1Q8TB36 358 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 ITSN2Q9NZM3 1697 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 KIF1CO43896 1103 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 HNRNPCP07910 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 TMOD1P28289 359 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 TCP10Q12799 353 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 MRPL28Q13084 256 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 NCLNQ969V3 563 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 ING2Q9H160 280 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 TMEM232C9JQI7 657 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 KDM1AO60341 852 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 PMLP29590 882 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 TMED2Q15363 201 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 CHRNA2Q15822 529 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 KSR2Q6VAB6 950 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 TMEM87BQ96K49 555 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 ZC3H18Q86VM9 953 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 BBOF1Q8ND07 529 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 MYH6P13533 1939 aa18.8■□□□□ 0.6
CACNA1A-201ENST00000360228 CFLARO15519 480 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 RFX6Q8HWS3 928 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 CYTH2Q99418 400 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 K7ENM7 598 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 NAA35Q5VZE5 725 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 KLC3Q6P597 504 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 GPBP1Q86WP2 473 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 TRIML2Q8N7C3 387 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 DEPDC1BQ8WUY9 529 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 SH3GL3Q99963 347 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 UPF3AQ9H1J1 476 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 HESX1Q9UBX0 185 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 TBK1Q9UHD2 729 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 DYNC1I2Q13409 638 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 RUNDC3BQ96NL0 473 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms