RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 TMEM232C9JQI7 657 aa15.37■□□□□ 0.05
CCDC197-201ENST00000359253 RAD21O60216 631 aa15.37■□□□□ 0.05
CCDC197-201ENST00000359253 ZNF202O95125 648 aa15.37■□□□□ 0.05
CCDC197-201ENST00000359253 PRPHP41219 470 aa15.37■□□□□ 0.05
CCDC197-201ENST00000359253 SYKP43405 635 aa15.37■□□□□ 0.05
CCDC197-201ENST00000359253 ZNF157P51786 506 aaPredicted RBP15.37■□□□□ 0.05
CCDC197-201ENST00000359253 USP14P54578 494 aa15.37■□□□□ 0.05
CCDC197-201ENST00000359253 QRICH1Q2TAL8 776 aa15.37■□□□□ 0.05
CCDC197-201ENST00000359253 EARS2Q5JPH6 523 aaKnown RBP15.37■□□□□ 0.05
CCDC197-201ENST00000359253 KANK3Q6NY19 840 aa15.37■□□□□ 0.05
CCDC197-201ENST00000359253 SASS6Q6UVJ0 657 aa15.37■□□□□ 0.05
CCDC197-201ENST00000359253 RASGRP2Q7LDG7 609 aa15.37■□□□□ 0.05
CCDC197-201ENST00000359253 ANP32BQ92688 251 aaKnown RBP15.37■□□□□ 0.05
CCDC197-201ENST00000359253 KIAA1683Q9H0B3 1180 aa15.37■□□□□ 0.05
CCDC197-201ENST00000359253 GOLPH3LQ9H4A5 285 aa15.37■□□□□ 0.05
CCDC197-201ENST00000359253 USP25Q9UHP3 1055 aa15.37■□□□□ 0.05
CCDC197-201ENST00000359253 A0A1B0GVL5 298 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 FDX1P10109 184 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 PFKFB1P16118 471 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 ATP2B1P20020 1258 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 SLC16A2P36021 539 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 NDUFA8P51970 172 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 HTRA3P83110 453 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 IKQ13123 557 aaPredicted RBP15.36■□□□□ 0.05
CCDC197-201ENST00000359253 NOGQ13253 232 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 CDC37Q16543 378 aaPredicted RBP15.36■□□□□ 0.05
CCDC197-201ENST00000359253 SHROOM1Q2M3G4 852 aaPredicted RBP15.36■□□□□ 0.05
CCDC197-201ENST00000359253 TPRNQ4KMQ1 711 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 SHC4Q6S5L8 630 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 NEK8Q86SG6 692 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 FBXO11Q86XK2 927 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.36■□□□□ 0.05
CCDC197-201ENST00000359253 SDF4Q9BRK5 362 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 FUCA2Q9BTY2 467 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 WDR18Q9BV38 432 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 PAPPA2Q9BXP8 1791 aa15.36■□□□□ 0.05
CCDC197-201ENST00000359253 BAZ2BQ9UIF8 2168 aaKnown RBP15.35■□□□□ 0.05
CCDC197-201ENST00000359253 WDR46O15213 610 aaKnown RBP15.35■□□□□ 0.05
CCDC197-201ENST00000359253 FOSP01100 380 aaPredicted RBP15.35■□□□□ 0.05
CCDC197-201ENST00000359253 LONP1P36776 959 aaKnown RBP15.35■□□□□ 0.05
CCDC197-201ENST00000359253 CLK2P49760 499 aaKnown RBP15.35■□□□□ 0.05
CCDC197-201ENST00000359253 VEGFBP49765 207 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 INHBEP58166 350 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 PTGDRQ13258 359 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 AP3B2Q13367 1082 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 ZNF174Q15697 407 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 MOB2Q70IA6 237 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 CDAN1Q8IWY9 1227 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 SCYL3Q8IZE3 742 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 ACER1Q8TDN7 264 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 COA7Q96BR5 231 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 CAPNS2Q96L46 248 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 PSTPIP2Q9H939 334 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 KCNH3Q9ULD8 1083 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 PCDHA1Q9Y5I3 950 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 CSADQ9Y600 493 aa15.35■□□□□ 0.05
CCDC197-201ENST00000359253 FAM205CA6NFA0 338 aa15.34■□□□□ 0.05
CCDC197-201ENST00000359253 ZBTB48P10074 688 aaPredicted RBP15.34■□□□□ 0.05
CCDC197-201ENST00000359253 XRCC6P12956 609 aaKnown RBP eCLIP15.34■□□□□ 0.05
CCDC197-201ENST00000359253 PRKG1Q13976 671 aa15.34■□□□□ 0.05
CCDC197-201ENST00000359253 CAMK4Q16566 473 aa15.34■□□□□ 0.05
CCDC197-201ENST00000359253 NOL9Q5SY16 702 aaKnown RBP15.34■□□□□ 0.05
CCDC197-201ENST00000359253 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.34■□□□□ 0.05
CCDC197-201ENST00000359253 FEZ1Q99689 392 aa15.34■□□□□ 0.05
CCDC197-201ENST00000359253 PICK1Q9NRD5 415 aa15.34■□□□□ 0.05
CCDC197-201ENST00000359253 PRR12Q9ULL5 1215 aa15.34■□□□□ 0.05
CCDC197-201ENST00000359253 SSC5DA1L4H1 1573 aa15.33■□□□□ 0.05
CCDC197-201ENST00000359253 FAM155AB1AL88 458 aaPredicted RBP15.33■□□□□ 0.04
CCDC197-201ENST00000359253 C19orf81C9J6K1 198 aa15.33■□□□□ 0.04
CCDC197-201ENST00000359253 PPP1R11O60927 126 aaPredicted RBP15.33■□□□□ 0.04
CCDC197-201ENST00000359253 SLC10A3P09131 477 aa15.33■□□□□ 0.04
CCDC197-201ENST00000359253 GCFC2P16383 781 aaKnown RBP15.33■□□□□ 0.04
CCDC197-201ENST00000359253 MCM7P33993 719 aa15.33■□□□□ 0.04
CCDC197-201ENST00000359253 ZRSR1Q15695 479 aaKnown RBP15.33■□□□□ 0.04
CCDC197-201ENST00000359253 INF2Q27J81 1249 aa15.33■□□□□ 0.04
CCDC197-201ENST00000359253 PPP4R3AQ6IN85 833 aa15.33■□□□□ 0.04
CCDC197-201ENST00000359253 CYP4F22Q6NT55 531 aa15.33■□□□□ 0.04
CCDC197-201ENST00000359253 DTHD1Q6ZMT9 781 aa15.33■□□□□ 0.04
CCDC197-201ENST00000359253 SAMD3Q8N6K7 520 aa15.33■□□□□ 0.04
CCDC197-201ENST00000359253 C4orf32Q8N8J7 132 aa15.33■□□□□ 0.04
CCDC197-201ENST00000359253 AK8Q96MA6 479 aa15.33■□□□□ 0.04
CCDC197-201ENST00000359253 CLIC6Q96NY7 704 aa15.33■□□□□ 0.04
CCDC197-201ENST00000359253 RBSNQ9H1K0 784 aa15.33■□□□□ 0.04
CCDC197-201ENST00000359253 RANBP17Q9H2T7 1088 aaKnown RBP15.33■□□□□ 0.04
CCDC197-201ENST00000359253 PIK3CDO00329 1044 aa15.32■□□□□ 0.04
CCDC197-201ENST00000359253 TXLNAP40222 546 aa15.32■□□□□ 0.04
CCDC197-201ENST00000359253 USP11P51784 963 aa15.32■□□□□ 0.04
CCDC197-201ENST00000359253 MAP2K1Q02750 393 aaPredicted RBP15.32■□□□□ 0.04
CCDC197-201ENST00000359253 TYRO3Q06418 890 aa15.32■□□□□ 0.04
CCDC197-201ENST00000359253 FAM83BQ5T0W9 1011 aa15.32■□□□□ 0.04
CCDC197-201ENST00000359253 MOXD1Q6UVY6 613 aa15.32■□□□□ 0.04
CCDC197-201ENST00000359253 ERO1BQ86YB8 467 aa15.32■□□□□ 0.04
CCDC197-201ENST00000359253 PRPF38AQ8NAV1 312 aaKnown RBP15.32■□□□□ 0.04
CCDC197-201ENST00000359253 RASGRP4Q8TDF6 673 aa15.32■□□□□ 0.04
CCDC197-201ENST00000359253 TBCKQ8TEA7 893 aa15.32■□□□□ 0.04
CCDC197-201ENST00000359253 WRNIP1Q96S55 665 aa15.32■□□□□ 0.04
CCDC197-201ENST00000359253 CSRNP2Q9H175 543 aa15.32■□□□□ 0.04
CCDC197-201ENST00000359253 KIAA1468Q9P260 1216 aa15.32■□□□□ 0.04
CCDC197-201ENST00000359253 BIN2Q9UBW5 565 aaPredicted RBP15.32■□□□□ 0.04
CCDC197-201ENST00000359253 MRPL11Q9Y3B7 192 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms