RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 AOC3Q16853 763 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 ZNF658Q5TYW1 1059 aaPredicted RBP16.81■□□□□ 0.28
GABPB1-202ENST00000359031 RASSF8Q8NHQ8 419 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 TBCKQ8TEA7 893 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 DCAF4Q8WV16 495 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 MTMR8Q96EF0 704 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 TRIM34Q9BYJ4 488 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 JMJD4Q9H9V9 463 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 NYAP2Q9P242 653 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 TMEM232C9JQI7 657 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 KCNB1Q14721 858 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 CDKAL1Q5VV42 579 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 TATDN1Q6P1N9 297 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 ZFPM1Q8IX07 1006 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 ADGRF4Q8IZF3 695 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 STAMQ92783 540 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 MKL1Q969V6 931 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 BLZF1Q9H2G9 400 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 KANSL2Q9H9L4 492 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 RRAGCQ9HB90 399 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 RIC8AQ9NPQ8 531 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 BIN2Q9UBW5 565 aaPredicted RBP16.81■□□□□ 0.28
GABPB1-202ENST00000359031 RWDD2AQ9UIY3 292 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 A0A1B0GTH6 734 aa16.8■□□□□ 0.28
GABPB1-202ENST00000359031 KIF2AO00139 706 aaPredicted RBP16.8■□□□□ 0.28
GABPB1-202ENST00000359031 CCP110O43303 1012 aa16.8■□□□□ 0.28
GABPB1-202ENST00000359031 ENTPD3O75355 529 aa16.8■□□□□ 0.28
GABPB1-202ENST00000359031 KCNA3P22001 575 aa16.8■□□□□ 0.28
GABPB1-202ENST00000359031 TBX2Q13207 712 aaPredicted RBP16.8■□□□□ 0.28
GABPB1-202ENST00000359031 CERKLQ49MI3 558 aaPredicted RBP16.8■□□□□ 0.28
GABPB1-202ENST00000359031 NAALADL2Q58DX5 795 aa16.8■□□□□ 0.28
GABPB1-202ENST00000359031 JAKMIP3Q5VZ66 844 aa16.8■□□□□ 0.28
GABPB1-202ENST00000359031 KLHL10Q6JEL2 608 aa16.8■□□□□ 0.28
GABPB1-202ENST00000359031 NYAP1Q6ZVC0 841 aa16.8■□□□□ 0.28
GABPB1-202ENST00000359031 CABP7Q86V35 215 aa16.8■□□□□ 0.28
GABPB1-202ENST00000359031 TNS4Q8IZW8 715 aa16.8■□□□□ 0.28
GABPB1-202ENST00000359031 CTAGE1Q96RT6 745 aa16.8■□□□□ 0.28
GABPB1-202ENST00000359031 SAMSN1Q9NSI8 373 aaKnown RBP16.8■□□□□ 0.28
GABPB1-202ENST00000359031 KBTBD4Q9NVX7 518 aa16.8■□□□□ 0.28
GABPB1-202ENST00000359031 ZNF219Q9P2Y4 722 aaPredicted RBP16.8■□□□□ 0.28
GABPB1-202ENST00000359031 CTNND2Q9UQB3 1225 aa16.8■□□□□ 0.28
GABPB1-202ENST00000359031 DDTLA6NHG4 134 aaPredicted RBP16.79■□□□□ 0.28
GABPB1-202ENST00000359031 ZBTB5O15062 677 aa16.79■□□□□ 0.28
GABPB1-202ENST00000359031 CACNB3P54284 484 aa16.79■□□□□ 0.28
GABPB1-202ENST00000359031 ATP2B2Q01814 1243 aa16.79■□□□□ 0.28
GABPB1-202ENST00000359031 TCP10Q12799 353 aa16.79■□□□□ 0.28
GABPB1-202ENST00000359031 PAK1Q13153 545 aa16.79■□□□□ 0.28
GABPB1-202ENST00000359031 SPECC1LQ69YQ0 1117 aa16.79■□□□□ 0.28
GABPB1-202ENST00000359031 TMEM179Q6ZVK1 233 aa16.79■□□□□ 0.28
GABPB1-202ENST00000359031 COA7Q96BR5 231 aa16.79■□□□□ 0.28
GABPB1-202ENST00000359031 GLT8D2Q9H1C3 349 aa16.79■□□□□ 0.28
GABPB1-202ENST00000359031 TMEM260Q9NX78 707 aa16.79■□□□□ 0.28
GABPB1-202ENST00000359031 PAXBP1Q9Y5B6 917 aa16.79■□□□□ 0.28
GABPB1-202ENST00000359031 PCDHAC2Q9Y5I4 1007 aa16.79■□□□□ 0.28
GABPB1-202ENST00000359031 BRCA1P38398 1863 aaKnown RBP16.79■□□□□ 0.28
GABPB1-202ENST00000359031 PP2D1A8MPX8 630 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 PPIP5K2O43314 1243 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 CDC25AP30304 524 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 CLK2P49760 499 aaKnown RBP16.78■□□□□ 0.28
GABPB1-202ENST00000359031 SPAG1Q07617 926 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 NR1I3Q14994 352 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 SH3BP5LQ7L8J4 393 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 ZSCAN29Q8IWY8 852 aaPredicted RBP16.78■□□□□ 0.28
GABPB1-202ENST00000359031 SMYD4Q8IYR2 804 aaPredicted RBP16.78■□□□□ 0.28
GABPB1-202ENST00000359031 SMC1BQ8NDV3 1235 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 CUL5Q93034 780 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 GTPBP4Q9BZE4 634 aaKnown RBP16.78■□□□□ 0.28
GABPB1-202ENST00000359031 TMX1Q9H3N1 280 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 USP27XA6NNY8 438 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 FXR2P51116 673 aaKnown RBP eCLIP16.78■□□□□ 0.28
GABPB1-202ENST00000359031 MRPL12P52815 198 aaKnown RBP16.78■□□□□ 0.28
GABPB1-202ENST00000359031 STX17P56962 302 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 PTPN14Q15678 1187 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 HSP90AA4PQ58FG1 418 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 CEP135Q66GS9 1140 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 TTBK2Q6IQ55 1244 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 APTXQ7Z2E3 356 aaKnown RBP16.78■□□□□ 0.28
GABPB1-202ENST00000359031 FCHSD1Q86WN1 690 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 IGSF22Q8N9C0 903 aa16.78■□□□□ 0.28
GABPB1-202ENST00000359031 NAP1L4Q99733 375 aaKnown RBP16.78■□□□□ 0.28
GABPB1-202ENST00000359031 PPP1R11O60927 126 aaPredicted RBP16.77■□□□□ 0.27
GABPB1-202ENST00000359031 EEF2P13639 858 aaKnown RBP16.77■□□□□ 0.27
GABPB1-202ENST00000359031 PLCG1P19174 1290 aa16.77■□□□□ 0.27
GABPB1-202ENST00000359031 ICA1Q05084 483 aa16.77■□□□□ 0.27
GABPB1-202ENST00000359031 CALCRLQ16602 461 aa16.77■□□□□ 0.27
GABPB1-202ENST00000359031 TMEM266Q2M3C6 531 aa16.77■□□□□ 0.27
GABPB1-202ENST00000359031 FILIP1LQ4L180 1135 aa16.77■□□□□ 0.27
GABPB1-202ENST00000359031 CCDC93Q567U6 631 aa16.77■□□□□ 0.27
GABPB1-202ENST00000359031 E4F1Q66K89 784 aaPredicted RBP16.77■□□□□ 0.27
GABPB1-202ENST00000359031 POTEDQ86YR6 584 aa16.77■□□□□ 0.27
GABPB1-202ENST00000359031 CCDC47Q96A33 483 aaKnown RBP16.77■□□□□ 0.27
GABPB1-202ENST00000359031 MTMR9Q96QG7 549 aa16.77■□□□□ 0.27
GABPB1-202ENST00000359031 RAB34Q9BZG1 259 aa16.77■□□□□ 0.27
GABPB1-202ENST00000359031 MYH7BA7E2Y1 1941 aa16.76■□□□□ 0.27
GABPB1-202ENST00000359031 YDJCA8MPS7 323 aa16.76■□□□□ 0.27
GABPB1-202ENST00000359031 USP17L10C9JJH3 530 aa16.76■□□□□ 0.27
GABPB1-202ENST00000359031 RIOK3O14730 519 aaKnown RBP16.76■□□□□ 0.27
GABPB1-202ENST00000359031 RHOBTB3O94955 611 aa16.76■□□□□ 0.27
GABPB1-202ENST00000359031 TUBB4AP04350 444 aa16.76■□□□□ 0.27
GABPB1-202ENST00000359031 SLC1A4P43007 532 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms