RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ATP2C1P98194 919 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-203ENST00000358528 IFFO1Q0D2I5 559 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 TMEM266Q2M3C6 531 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 SV2BQ7L1I2 683 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 MAPKAPK5Q8IW41 473 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 MSANTD4Q8NCY6 345 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 P2RX5Q93086 422 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 SPAG5Q96R06 1193 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 LIMA1Q9UHB6 759 aaKnown RBP7.31□□□□□ -1.24
CSDE1-203ENST00000358528 LONP1P36776 959 aaKnown RBP7.3□□□□□ -1.24
CSDE1-203ENST00000358528 CACNB1Q02641 598 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-203ENST00000358528 PPP2R5BQ15173 497 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 TRMT1LQ7Z2T5 733 aaKnown RBP7.3□□□□□ -1.24
CSDE1-203ENST00000358528 SLC44A5Q8NCS7 719 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 TRIM58Q8NG06 486 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 RRP36Q96EU6 259 aaKnown RBP7.3□□□□□ -1.24
CSDE1-203ENST00000358528 EPB41L5Q9HCM4 733 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 HPCAL4Q9UM19 191 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 PACSIN2Q9UNF0 486 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-203ENST00000358528 TOPAZ1Q8N9V7 1692 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 GOLGA6L7A0A1B0GV03 622 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 MPHOSPH10O00566 681 aaKnown RBP7.3□□□□□ -1.24
CSDE1-203ENST00000358528 SEMA3EO15041 775 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 USP8P40818 1118 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 ARHGAP25P42331 645 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 EHHADHQ08426 723 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 PKN1Q16512 942 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 TICAM2Q86XR7 235 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 CEP57Q86XR8 500 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 TGFBRAP1Q8WUH2 860 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 HNRNPLLQ8WVV9 542 aaKnown RBP7.3□□□□□ -1.24
CSDE1-203ENST00000358528 MS4A14Q96JA4 679 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 KRT12Q99456 494 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 NUP58Q9BVL2 599 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 TMEM60Q9H2L4 133 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 NFU1Q9UMS0 254 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 ZNF652Q9Y2D9 606 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 AFDNP55196 1824 aaKnown RBP7.3□□□□□ -1.24
CSDE1-203ENST00000358528 FAM237AA0A1B0GTK4 181 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 TLDC2A0PJX2 215 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 SMCO2A6NFE2 343 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 FGFR1OPO95684 399 aaKnown RBP7.3□□□□□ -1.24
CSDE1-203ENST00000358528 EEF1GP26641 437 aaKnown RBP7.3□□□□□ -1.24
CSDE1-203ENST00000358528 PRDX5P30044 214 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 PPFIA1Q13136 1202 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 TRIM28Q13263 835 aaKnown RBP7.3□□□□□ -1.24
CSDE1-203ENST00000358528 PICALMQ13492 652 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 NT5DC1Q5TFE4 455 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 HDAC7Q8WUI4 952 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 UBLCP1Q8WVY7 318 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-203ENST00000358528 NOX5Q96PH1 765 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 TSGA10Q9BZW7 698 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 HYOU1Q9Y4L1 999 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 NFAT5O94916 1531 aa7.3□□□□□ -1.24
CSDE1-203ENST00000358528 E7EVH7 732 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 F8W031 263 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-203ENST00000358528 G3V3G9 751 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 MYBL2P10244 700 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 HIBADHP31937 336 aaKnown RBP7.29□□□□□ -1.24
CSDE1-203ENST00000358528 KIF11P52732 1056 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 HERVK_113P62684 666 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 ZBED6P86452 979 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 CEP85LQ5SZL2 805 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 DCAF8Q5TAQ9 597 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 FBXW10Q5XX13 1052 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 ANKRD40Q6AI12 368 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 CNNM4Q6P4Q7 775 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 C6orf50Q9HD87 102 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 GPCPD1Q9NPB8 672 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 DMGDHQ9UI17 866 aaKnown RBP7.29□□□□□ -1.24
CSDE1-203ENST00000358528 PCDHA13Q9Y5I0 950 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 FAM169AQ9Y6X4 670 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 OVOS2A0A0G2JMS6 1433 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 CHD2O14647 1828 aaKnown RBP7.29□□□□□ -1.24
CSDE1-203ENST00000358528 CEP104O60308 925 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 HEXIM1O94992 359 aaKnown RBP7.29□□□□□ -1.24
CSDE1-203ENST00000358528 POLR2FP61218 127 aaKnown RBP7.29□□□□□ -1.24
CSDE1-203ENST00000358528 GFPT1Q06210 699 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-203ENST00000358528 STK4Q13043 487 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 NONOQ15233 471 aaKnown RBP eCLIP7.29□□□□□ -1.242e-6■■□□□ 12.7
CSDE1-203ENST00000358528 ADAT2Q7Z6V5 191 aaKnown RBP7.29□□□□□ -1.24
CSDE1-203ENST00000358528 SNX29Q8TEQ0 813 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 RPGRIP1Q96KN7 1286 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 RAB21Q9UL25 225 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 C1orf167Q5SNV9 1468 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 KLRF2D3W0D1 207 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 TULP2O00295 520 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 DDAH1O94760 285 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 CYP19A1P11511 503 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-203ENST00000358528 GNAQP50148 359 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 TXNRD1Q16881 649 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 KRT79Q5XKE5 535 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 ICE2Q659A1 982 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 TADA2BQ86TJ2 420 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 CCDC155Q8N6L0 562 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 CARD10Q9BWT7 1032 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 CCDC87Q9NVE4 849 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 PSD3Q9NYI0 1048 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 FAM184BQ9ULE4 1060 aa7.29□□□□□ -1.24
CSDE1-203ENST00000358528 PCDHA4Q9UN74 947 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms