RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 STRBPQ96SI9 672 aaKnown RBP11.9□□□□□ -0.5
CAPN3-205ENST00000357568 PUS3Q9BZE2 481 aaKnown RBP11.9□□□□□ -0.5
CAPN3-205ENST00000357568 SENP2Q9HC62 589 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 DONSONQ9NYP3 566 aa11.9□□□□□ -0.5
CAPN3-205ENST00000357568 TRMT112Q9UI30 125 aaKnown RBP11.9□□□□□ -0.5
CAPN3-205ENST00000357568 DOCK2Q92608 1830 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 RTL9Q8NET4 1388 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 TCRBV5S4A2TA0A5A2 114 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 IPO7O95373 1038 aaKnown RBP11.89□□□□□ -0.51
CAPN3-205ENST00000357568 UQCRFS1P1P0C7P4 283 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 RXRAP19793 462 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 FNTAP49354 379 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 AKNAD1Q5T1N1 836 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 PRR5LQ6MZQ0 368 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 USP49Q70CQ1 688 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 C3orf20Q8ND61 904 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 SYMPKQ92797 1274 aaKnown RBP11.89□□□□□ -0.51
CAPN3-205ENST00000357568 ZNF594Q96JF6 807 aaPredicted RBP11.89□□□□□ -0.51
CAPN3-205ENST00000357568 ANKRD31Q8N7Z5 1873 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 A0A1W2PQJ5 194 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 TMCO5BA8MYB1 307 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 CCDC172P0C7W6 258 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 GNAT2P19087 354 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 KRT2P35908 639 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 CCT6AP40227 531 aaKnown RBP11.89□□□□□ -0.51
CAPN3-205ENST00000357568 DNM2P50570 870 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 GNGT1P63211 74 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 CD302Q8IX05 232 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 TRIM58Q8NG06 486 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 CAGE1Q8TC20 777 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 CHP1Q99653 195 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 ZSWIM5Q9P217 1185 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 KCNJ14Q9UNX9 436 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 MYH3P11055 1940 aa11.89□□□□□ -0.51
CAPN3-205ENST00000357568 XDHP47989 1333 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 TTC26A0AVF1 554 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 RNF225M0QZC1 329 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-205ENST00000357568 KIAA0754O94854 1291 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 ARID4AP29374 1257 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-205ENST00000357568 GUCY1A2P33402 732 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 MCAMP43121 646 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 AFMP43652 599 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 LIG3P49916 1009 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 ATP2C1P98194 919 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-205ENST00000357568 UBXN1Q04323 297 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 RRAGBQ5VZM2 374 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 PDXDC2PQ6P474 469 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 TMED8Q6PL24 325 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-205ENST00000357568 KDM7AQ6ZMT4 941 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 KIAA1328Q86T90 577 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 MREGQ8N565 214 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 NELFBQ8WX92 580 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 PHF20Q9BVI0 1012 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 TAB2Q9NYJ8 693 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 DLEC1Q9Y238 1755 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 MEFVO15553 781 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-205ENST00000357568 PDE6AP16499 860 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 TCP1P17987 556 aaKnown RBP11.88□□□□□ -0.51
CAPN3-205ENST00000357568 MNAT1P51948 309 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 KCNB1Q14721 858 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 WTAPQ15007 396 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 WDR59Q6PJI9 974 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 EP400NLQ6ZTU2 488 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 ANKRD18AQ8IVF6 992 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 BRIP1Q9BX63 1249 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 TTYH3Q9C0H2 523 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 VPS16Q9H269 839 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 RNF41Q9H4P4 317 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-205ENST00000357568 CABP5Q9NP86 173 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 TOMM22Q9NS69 142 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 RNF14Q9UBS8 474 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 SNX12Q9UMY4 172 aa11.88□□□□□ -0.51
CAPN3-205ENST00000357568 ERICH2A1L162 156 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 HSF2BPO75031 334 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 SRGNP10124 158 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 VAV2P52735 878 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 NR5A1Q13285 461 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 NKX2-3Q8TAU0 364 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.87□□□□□ -0.51
CAPN3-205ENST00000357568 EPSTI1Q96J88 318 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 DENND2AQ9ULE3 1009 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 CEP83Q9Y592 693 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 CD2APQ9Y5K6 639 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 MYH13Q9UKX3 1938 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 KIAA1551Q9HCM1 1747 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 KLRG2A4D1S0 409 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-205ENST00000357568 PRPF3O43395 683 aaKnown RBP11.87□□□□□ -0.51
CAPN3-205ENST00000357568 PARP1P09874 1014 aaKnown RBP11.87□□□□□ -0.51
CAPN3-205ENST00000357568 MYBL2P10244 700 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 PDE6BP35913 854 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 PPP1R2P41236 205 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 ZBED6P86452 979 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 ERFEQ4G0M1 354 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 TAX1BP1Q86VP1 789 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 FANCBQ8NB91 859 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 RIN2Q8WYP3 895 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-205ENST00000357568 PLEKHA4Q9H4M7 779 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 HDAC6Q9UBN7 1215 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 ZNF532Q9HCE3 1301 aa11.87□□□□□ -0.51
CAPN3-205ENST00000357568 TNRC6CQ9HCJ0 1690 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms