RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 RGPD1P0DJD0 1748 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 TCRBV5S4A2TA0A5A2 114 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 LGALS16A8MUM7 142 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 PPP1R3GB7ZBB8 358 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 SEMA3EO15041 775 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 USP8P40818 1118 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 CACNB1Q02641 598 aaPredicted RBP7.59□□□□□ -1.19
RTN4-203ENST00000357376 PFKFB3Q16875 520 aaPredicted RBP7.59□□□□□ -1.19
RTN4-203ENST00000357376 RASGRP2Q7LDG7 609 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 ADGRA1Q86SQ6 560 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 RIN2Q8WYP3 895 aaPredicted RBP7.59□□□□□ -1.19
RTN4-203ENST00000357376 FUT8Q9BYC5 575 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 LRRC27Q9C0I9 530 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 NFAT5O94916 1531 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 MYO1CO00159 1063 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 ZNF185O15231 689 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 PPP1R12BO60237 982 aaPredicted RBP7.59□□□□□ -1.19
RTN4-203ENST00000357376 CCT5P48643 541 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 GTF2A1P52655 376 aaPredicted RBP7.59□□□□□ -1.19
RTN4-203ENST00000357376 ERVK-24P63145 666 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 SF3A3Q12874 501 aaKnown RBP eCLIP7.59□□□□□ -1.19
RTN4-203ENST00000357376 SLC9C1Q4G0N8 1177 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 CCDC84Q86UT8 332 aaPredicted RBP7.59□□□□□ -1.19
RTN4-203ENST00000357376 TBCKQ8TEA7 893 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 ZNF512BQ96KM6 892 aaPredicted RBP7.59□□□□□ -1.19
RTN4-203ENST00000357376 BRIP1Q9BX63 1249 aa7.59□□□□□ -1.19
RTN4-203ENST00000357376 RTCBQ9Y3I0 505 aaKnown RBP7.59□□□□□ -1.19
RTN4-203ENST00000357376 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.59□□□□□ -1.19
RTN4-203ENST00000357376 ADCY7P51828 1080 aa7.59□□□□□ -1.2
RTN4-203ENST00000357376 GNGT1P63211 74 aa7.59□□□□□ -1.2
RTN4-203ENST00000357376 SLF2Q8IX21 1173 aa7.59□□□□□ -1.2
RTN4-203ENST00000357376 GPATCH11Q8N954 259 aa7.59□□□□□ -1.2
RTN4-203ENST00000357376 WDR66Q8TBY9 1149 aa7.59□□□□□ -1.2
RTN4-203ENST00000357376 BCAS4Q8TDM0 211 aa7.59□□□□□ -1.2
RTN4-203ENST00000357376 MMS19Q96T76 1030 aa7.59□□□□□ -1.2
RTN4-203ENST00000357376 AGPAT5Q9NUQ2 364 aa7.59□□□□□ -1.2
RTN4-203ENST00000357376 MINPP1Q9UNW1 487 aa7.59□□□□□ -1.2
RTN4-203ENST00000357376 ZNF804BA4D1E1 1349 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 SMIM23A6NLE4 172 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 TRIM66O15016 1216 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 TBCAO75347 108 aaKnown RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 FCER1AP12319 257 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 CCNE1P24864 410 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 EIF4A3P38919 411 aaKnown RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 POLR2FP61218 127 aaKnown RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 KLHL30Q0D2K2 578 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 FAM98CQ17RN3 349 aaKnown RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 RPGRIP1Q96KN7 1286 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 TRIM31Q9BZY9 425 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 XDHP47989 1333 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 WTIPA6NIX2 430 aaPredicted RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 H3BQF6 201 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 PCP11498 1178 aaKnown RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 KLK7P49862 253 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 LIG3P49916 1009 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 ZBED6P86452 979 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 TXNRD1Q16881 649 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 MEX3CQ5U5Q3 659 aaKnown RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 ARL6IP4Q66PJ3 421 aaKnown RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 OTUD6BQ8N6M0 293 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 COA7Q96BR5 231 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 PIGSQ96S52 555 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 LSM14BQ9BX40 385 aaKnown RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 MLXIPQ9HAP2 919 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 HYOU1Q9Y4L1 999 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 CEP104O60308 925 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 PPP1R2P41236 205 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 MDM2Q00987 491 aaPredicted RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 TROAPQ12815 778 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 TBX2Q13207 712 aaPredicted RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 CFAP221Q4G0U5 840 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 SFMBT2Q5VUG0 894 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 ZNF34Q8IZ26 560 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 DHTKD1Q96HY7 919 aaPredicted RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 FAM84BQ96KN1 310 aaPredicted RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 HSD3B7Q9H2F3 369 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 THAP9Q9H5L6 903 aa7.58□□□□□ -1.2
RTN4-203ENST00000357376 SRP68Q9UHB9 627 aaKnown RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 MKRN1Q9UHC7 482 aaKnown RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 ZNF335Q9H4Z2 1342 aaPredicted RBP7.58□□□□□ -1.2
RTN4-203ENST00000357376 SETD1AO15047 1707 aaKnown RBP7.57□□□□□ -1.2
RTN4-203ENST00000357376 FTCDO95954 541 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 KIF11P52732 1056 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 GUCY2DQ02846 1103 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 EHHADHQ08426 723 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 CCDC65Q8IXS2 484 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 UBLCP1Q8WVY7 318 aaPredicted RBP7.57□□□□□ -1.2
RTN4-203ENST00000357376 KIFC2Q96AC6 838 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 POLD4Q9HCU8 107 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 LIMA1Q9UHB6 759 aaKnown RBP7.57□□□□□ -1.2
RTN4-203ENST00000357376 GOLGA6L7A0A1B0GV03 622 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 GGCXP38435 758 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 BTDP43251 543 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 SARSP49591 514 aaKnown RBP7.57□□□□□ -1.2
RTN4-203ENST00000357376 RCAN1P53805 252 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 TNNC1P63316 161 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 PPFIA1Q13136 1202 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 PLS1Q14651 629 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 FAM182BQ5T319 152 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 IFT20Q8IY31 132 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms