RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 EP400NLQ6ZTU2 488 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 KIFC2Q96AC6 838 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 RNF26Q9BY78 433 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 TRIM33Q9UPN9 1127 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 PYGBP11216 843 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 CACYBPQ9HB71 228 aaKnown RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 TRMT112Q9UI30 125 aaKnown RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 MTMR6Q9Y217 621 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 SRRM3A6NNA2 597 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 MAPK13O15264 365 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 TTC4O95801 387 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 RARS2Q5T160 578 aaKnown RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 TTC6Q86TZ1 520 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 ARHGAP42A6NI28 874 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 DNA2P51530 1060 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 CASP8Q14790 479 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 TRMT2AQ8IZ69 625 aaKnown RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 SEPT3Q9UH03 358 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 BLOC1S6Q9UL45 172 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 PFASO15067 1338 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 CDK12Q9NYV4 1490 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 CTNND1O60716 968 aaKnown RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 H2AFZP0C0S5 128 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 GAP43P17677 238 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 CYP2C19P33261 490 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 H2AFVQ71UI9 128 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 TRPC6Q9Y210 931 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 SH3TC1Q8TE82 1336 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 MYL6BP14649 208 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 MEIS3Q99687 375 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 TRIM55Q9BYV6 548 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 MAP3K15Q6ZN16 1313 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 CRCPO75575 148 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 TOM1L2Q6ZVM7 507 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 BZW1Q7L1Q6 419 aaKnown RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 INTS9Q9NV88 658 aaKnown RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 KIAA1210Q9ULL0 1709 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 CACNA1DQ01668 2161 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 PZPP20742 1482 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 DHX9Q08211 1270 aaKnown RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 ALKBH8Q96BT7 664 aaKnown RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 EPSTI1Q96J88 318 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 RWDD2AQ9UIY3 292 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 PCDHB13Q9Y5F0 798 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 MED23Q9ULK4 1368 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 RASSF10A6NK89 507 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 GGPS1O95749 300 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 APBB2Q92870 758 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 ZC4H2Q9NQZ6 224 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 EYA2O00167 538 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 KLHL29Q96CT2 875 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 A2MP01023 1474 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 KARSQ15046 597 aaKnown RBP7.16□□□□□ -1.26
VPS13B-202ENST00000357162 PRPF38AQ8NAV1 312 aaKnown RBP7.16□□□□□ -1.26
VPS13B-202ENST00000357162 PAWRQ96IZ0 340 aaKnown RBP7.16□□□□□ -1.26
VPS13B-202ENST00000357162 KRT37O76014 449 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 SLFN14P0C7P3 912 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 CCDC25Q86WR0 208 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 POLR2DO15514 142 aaKnown RBP7.16□□□□□ -1.26
VPS13B-202ENST00000357162 DENND2AQ9ULE3 1009 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 ADRM1Q16186 407 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 CC2D1AQ6P1N0 951 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-202ENST00000357162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.16□□□□□ -1.26
VPS13B-202ENST00000357162 CCDC28BQ9BUN5 200 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 ATP5BP06576 529 aaKnown RBP7.16□□□□□ -1.26
VPS13B-202ENST00000357162 MAP3K10Q02779 954 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 CRYMQ14894 314 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 KRT26Q7Z3Y9 468 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 CNPY3Q9BT09 278 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 STX8Q9UNK0 236 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 DNM3Q9UQ16 869 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 ADCY9O60503 1353 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 KDRP35968 1356 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 FOSP01100 380 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-202ENST00000357162 GUCY2CP25092 1073 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 LIG3P49916 1009 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 MSL3Q8N5Y2 521 aaKnown RBP7.16□□□□□ -1.26
VPS13B-202ENST00000357162 RPGRQ92834 1020 aaKnown RBP7.16□□□□□ -1.26
VPS13B-202ENST00000357162 LIFRP42702 1097 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 NSFP46459 744 aaKnown RBP7.16□□□□□ -1.26
VPS13B-202ENST00000357162 SLC30A9Q6PML9 568 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 LRIG3Q6UXM1 1119 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 JPH2Q9BR39 696 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-202ENST00000357162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.16□□□□□ -1.262e-7■■■■■ 26.8
VPS13B-202ENST00000357162 FRMD3A2A2Y4 597 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 VWA3AA6NCI4 1184 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 OPHN1O60890 802 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 ATF2P15336 505 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 CCT5P48643 541 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 POTEAQ6S8J7 498 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 CCDC13Q8IYE1 715 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 IL1RAPL1Q9NZN1 696 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 TET3O43151 1660 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 SRGAP2BP0DMP2 458 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 MTX1Q13505 466 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 CDC42BPAQ5VT25 1732 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 POP5Q969H6 163 aaKnown RBP7.16□□□□□ -1.26
VPS13B-202ENST00000357162 SH3GLB2Q9NR46 395 aa7.16□□□□□ -1.26
VPS13B-202ENST00000357162 TNNQ9UQP3 1299 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms