RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 DIXDC1Q155Q3 683 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 CERKLQ49MI3 558 aaPredicted RBP7.07□□□□□ -1.28
UPF2-201ENST00000356352 SRRM1Q8IYB3 904 aaKnown RBP7.07□□□□□ -1.28
UPF2-201ENST00000356352 RETREG2Q8NC44 543 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 CCHCR1Q8TD31 782 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.07□□□□□ -1.281e-6■■■■■ 44.5
UPF2-201ENST00000356352 SEPT10Q9P0V9 454 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 SLC12A6Q9UHW9 1150 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 HIP1RO75146 1068 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 ALAS1P13196 640 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 SCG2P13521 617 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 OSBPP22059 807 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 XPAP23025 273 aaPredicted RBP7.06□□□□□ -1.28
UPF2-201ENST00000356352 PTK2Q05397 1052 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 PLA2G4DQ86XP0 818 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 NME8Q8N427 588 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 ATP6V0A1Q93050 837 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 CNKSR1Q969H4 720 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 HDAC11Q96DB2 347 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 EFCC1Q9HA90 598 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 NLRC4Q9NPP4 1024 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 PFKFB2O60825 505 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 ECE1P42892 770 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 MYL7Q01449 175 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 KRT24Q2M2I5 525 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 G2E3Q7L622 706 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 ANKRD35Q8N283 1001 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 PAGR1Q9BTK6 254 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 MYL10Q9BUA6 226 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 IFNB1P01574 187 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 H2AFZP0C0S5 128 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 PFKFB1P16118 471 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 CMA1P23946 247 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 TRAPPC10P48553 1259 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 ICA1Q05084 483 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 MMEL1Q495T6 779 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 EAPPQ56P03 285 aaPredicted RBP7.06□□□□□ -1.28
UPF2-201ENST00000356352 HSP90AA5PQ58FG0 334 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 GADL1Q6ZQY3 521 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 H2AFVQ71UI9 128 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 LRRC8CQ8TDW0 803 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 CACTINQ8WUQ7 758 aaKnown RBP7.06□□□□□ -1.28
UPF2-201ENST00000356352 NLRP7Q8WX94 980 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 CCDC124Q96CT7 223 aaKnown RBP7.06□□□□□ -1.28
UPF2-201ENST00000356352 CCDC17Q96LX7 622 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 DRC3Q9H069 523 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 MED4Q9NPJ6 270 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 KIAA1468Q9P260 1216 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 ANGPTL3Q9Y5C1 460 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 NFKBIAP25963 317 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 CDR2Q01850 454 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 ASPRV1Q53RT3 343 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 FAM47AQ5JRC9 791 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 EFCAB13Q8IY85 973 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 IFNL3Q8IZI9 196 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 AK8Q96MA6 479 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 TSPYL2Q9H2G4 693 aaPredicted RBP7.06□□□□□ -1.28
UPF2-201ENST00000356352 ORC6Q9Y5N6 252 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 EFCAB8A8MWE9 144 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 SART1O43290 800 aaKnown RBP7.06□□□□□ -1.28
UPF2-201ENST00000356352 MED7O43513 233 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 ABCB4P21439 1286 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 TECP42680 631 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 RBM6P78332 1123 aaKnown RBP7.06□□□□□ -1.28
UPF2-201ENST00000356352 GTF2IP78347 998 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 LONRF3Q496Y0 759 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 MIS18BP1Q6P0N0 1132 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 MGARPQ8TDB4 240 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 EPS15L1Q9UBC2 864 aa7.06□□□□□ -1.28
UPF2-201ENST00000356352 CTTNBP2Q8WZ74 1663 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 NEURL1BA8MQ27 555 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 RPN1P04843 607 aaKnown RBP7.05□□□□□ -1.28
UPF2-201ENST00000356352 NT5C2P49902 561 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 IL9RQ01113 521 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 PRKG1Q13976 671 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 KCTD2Q14681 263 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 PDCD2Q16342 344 aaPredicted RBP7.05□□□□□ -1.28
UPF2-201ENST00000356352 SULF1Q8IWU6 871 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 FANCBQ8NB91 859 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 NT5C1BQ96P26 610 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 TUBB6Q9BUF5 446 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 MID2Q9UJV3 735 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 GPC4O75487 556 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 ABL1P00519 1130 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 MYL1P05976 194 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 ADAM9Q13443 819 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 GPATCH4Q5T3I0 446 aaKnown RBP7.05□□□□□ -1.28
UPF2-201ENST00000356352 SPATA1Q5VX52 437 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 NCAPG2Q86XI2 1143 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 ABI1Q8IZP0 508 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 RDH13Q8NBN7 331 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 CDHR1Q96JP9 859 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 NACC1Q96RE7 527 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 XPO4Q9C0E2 1151 aaKnown RBP7.05□□□□□ -1.28
UPF2-201ENST00000356352 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.05□□□□□ -1.28
UPF2-201ENST00000356352 ADD3Q9UEY8 706 aaKnown RBP7.05□□□□□ -1.28
UPF2-201ENST00000356352 APBA3O96018 575 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 INHBAP08476 426 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 GNGT1P63211 74 aa7.05□□□□□ -1.28
UPF2-201ENST00000356352 FAM26FQ5R3K3 315 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms