RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 MAP3K13O43283 966 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 GNAQP50148 359 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 MYBPC3Q14896 1274 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 CDC37Q16543 378 aaPredicted RBP17.43■□□□□ 0.38
RTN3-205ENST00000356000 SGSM1Q2NKQ1 1148 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 SPATA1Q5VX52 437 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 ANKRD24Q8TF21 1146 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 CHP1Q99653 195 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 TAF1DQ9H5J8 278 aaPredicted RBP17.43■□□□□ 0.38
RTN3-205ENST00000356000 TMEM165Q9HC07 324 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 NCAPD2Q15021 1401 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 SEMA3EO15041 775 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 CYP27B1O15528 508 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 HPDP32754 393 aaPredicted RBP17.43■□□□□ 0.38
RTN3-205ENST00000356000 MRPS35P82673 323 aaKnown RBP17.43■□□□□ 0.38
RTN3-205ENST00000356000 KIF23Q02241 960 aaPredicted RBP17.43■□□□□ 0.38
RTN3-205ENST00000356000 POSTNQ15063 836 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 PTPAQ15257 358 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 ZNF827Q17R98 1081 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 TBC1D1Q86TI0 1168 aaPredicted RBP17.43■□□□□ 0.38
RTN3-205ENST00000356000 AACSQ86V21 672 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 MIPOL1Q8TD10 442 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 PICK1Q9NRD5 415 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 CPDO75976 1380 aa17.43■□□□□ 0.38
RTN3-205ENST00000356000 RGPD3A6NKT7 1758 aaPredicted RBP17.42■□□□□ 0.38
RTN3-205ENST00000356000 RGPD4Q7Z3J3 1758 aa17.42■□□□□ 0.38
RTN3-205ENST00000356000 SASH1O94885 1247 aa17.42■□□□□ 0.38
RTN3-205ENST00000356000 TRIM14Q14142 442 aa17.42■□□□□ 0.38
RTN3-205ENST00000356000 RMI1Q9H9A7 625 aa17.42■□□□□ 0.38
RTN3-205ENST00000356000 PHF24Q9UPV7 400 aa17.42■□□□□ 0.38
RTN3-205ENST00000356000 CREB3O43889 395 aa17.42■□□□□ 0.38
RTN3-205ENST00000356000 MAP3K12Q12852 859 aa17.42■□□□□ 0.38
RTN3-205ENST00000356000 UBE2OQ9C0C9 1292 aaKnown RBP17.42■□□□□ 0.38
RTN3-205ENST00000356000 JADE2Q9NQC1 790 aa17.42■□□□□ 0.38
RTN3-205ENST00000356000 CEP131Q9UPN4 1083 aa17.42■□□□□ 0.38
RTN3-205ENST00000356000 TNS1Q9HBL0 1735 aaKnown RBP17.42■□□□□ 0.38
RTN3-205ENST00000356000 MAP3K15Q6ZN16 1313 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 KRT86O43790 486 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 EVI5O60447 810 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 MYBL1P10243 752 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 IDEP14735 1019 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 DRD4P21917 467 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 TAF11Q15544 211 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 IFI16Q16666 785 aaKnown RBP17.41■□□□□ 0.38
RTN3-205ENST00000356000 ANO7Q6IWH7 933 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 CNBD1Q8NA66 436 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 RAPGEF5Q92565 580 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 NUP88Q99567 741 aaPredicted RBP17.41■□□□□ 0.38
RTN3-205ENST00000356000 KRT9P35527 623 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 SEPT2Q15019 361 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 KIAA0753Q2KHM9 967 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 ERICH1Q86X53 443 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 ZWILCHQ9H900 591 aa17.41■□□□□ 0.38
RTN3-205ENST00000356000 PLEKHG3A1L390 1219 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 F8W031 263 aaPredicted RBP17.4■□□□□ 0.38
RTN3-205ENST00000356000 FAM153BP0C7A2 387 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 MRPS25P82663 173 aaKnown RBP17.4■□□□□ 0.38
RTN3-205ENST00000356000 ADAM9Q13443 819 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 FAM153CQ494X1 144 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 SULT6B1Q6IMI4 303 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 DPY19L2Q6NUT2 758 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 FAM153AQ9UHL3 310 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 TAOK2Q9UL54 1235 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 SNX12Q9UMY4 172 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 M0R2C6 588 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 NQO1P15559 274 aaKnown RBP17.4■□□□□ 0.38
RTN3-205ENST00000356000 MAGEA10P43363 369 aaPredicted RBP17.4■□□□□ 0.38
RTN3-205ENST00000356000 TUBP50607 506 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 PABPC1LQ4VXU2 614 aaKnown RBP17.4■□□□□ 0.38
RTN3-205ENST00000356000 ARMCX6Q7L4S7 300 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 CPLX4Q7Z7G2 160 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 YIPF2Q9BWQ6 316 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 GDF3Q9NR23 364 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 TFR2Q9UP52 801 aa17.4■□□□□ 0.38
RTN3-205ENST00000356000 THRAP3Q9Y2W1 955 aaKnown RBP17.4■□□□□ 0.38
RTN3-205ENST00000356000 MINK1Q8N4C8 1332 aaPredicted RBP17.4■□□□□ 0.38
RTN3-205ENST00000356000 ORC4O43929 436 aa17.39■□□□□ 0.37
RTN3-205ENST00000356000 ATP6V1G1O75348 118 aa17.39■□□□□ 0.37
RTN3-205ENST00000356000 ATP2A2P16615 1042 aaKnown RBP17.39■□□□□ 0.37
RTN3-205ENST00000356000 CDC25AP30304 524 aa17.39■□□□□ 0.37
RTN3-205ENST00000356000 IFT20Q8IY31 132 aa17.39■□□□□ 0.37
RTN3-205ENST00000356000 SPICE1Q8N0Z3 855 aa17.39■□□□□ 0.37
RTN3-205ENST00000356000 CCDC197Q8NCU1 140 aa17.39■□□□□ 0.37
RTN3-205ENST00000356000 PURBQ96QR8 312 aaKnown RBP17.39■□□□□ 0.37
RTN3-205ENST00000356000 PRLRP16471 622 aa17.39■□□□□ 0.37
RTN3-205ENST00000356000 TMOD1P28289 359 aa17.39■□□□□ 0.37
RTN3-205ENST00000356000 PPARAQ07869 468 aa17.39■□□□□ 0.37
RTN3-205ENST00000356000 FKBP15Q5T1M5 1219 aa17.39■□□□□ 0.37
RTN3-205ENST00000356000 BARGINQ6ZT62 677 aa17.39■□□□□ 0.37
RTN3-205ENST00000356000 KIAA0825Q8IV33 1275 aa17.39■□□□□ 0.37
RTN3-205ENST00000356000 SMCR8Q8TEV9 937 aaPredicted RBP17.39■□□□□ 0.37
RTN3-205ENST00000356000 LZTS2Q9BRK4 669 aa17.39■□□□□ 0.37
RTN3-205ENST00000356000 BOLA2Q9H3K6 86 aa17.39■□□□□ 0.37
RTN3-205ENST00000356000 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.39■□□□□ 0.37
RTN3-205ENST00000356000 KRT83P78385 493 aa17.38■□□□□ 0.37
RTN3-205ENST00000356000 LRIG3Q6UXM1 1119 aa17.38■□□□□ 0.37
RTN3-205ENST00000356000 TSHZ1Q6ZSZ6 1077 aa17.38■□□□□ 0.37
RTN3-205ENST00000356000 SYT15Q9BQS2 421 aa17.38■□□□□ 0.37
RTN3-205ENST00000356000 IQCGQ9H095 443 aaKnown RBP17.38■□□□□ 0.37
RTN3-205ENST00000356000 LRRC42Q9Y546 428 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms