RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 DUOX2Q9NRD8 1548 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 RNF8O76064 485 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 APOEP02649 317 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 RAPH1Q70E73 1250 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 TEKT3Q9BXF9 490 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 DDX25Q9UHL0 483 aaKnown RBP16.24■□□□□ 0.19
LMX1B-201ENST00000355497 USP19O94966 1318 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 POC1B-GALNT4F8VUJ3 575 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 POLR2MP0CAP2 368 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 IFRD2Q12894 506 aaPredicted RBP16.24■□□□□ 0.19
LMX1B-201ENST00000355497 ADAM9Q13443 819 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 TTC19Q6DKK2 380 aaPredicted RBP16.24■□□□□ 0.19
LMX1B-201ENST00000355497 TTBK2Q6IQ55 1244 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 TRIM42Q8IWZ5 723 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 PPM1KQ8N3J5 372 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 IFT122Q9HBG6 1241 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 SMYD2Q9NRG4 433 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 SLC5A4Q9NY91 659 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 A0A1W2PP64 1363 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 GNGT2O14610 69 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 PFDN1O60925 122 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 PEX19P40855 299 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 PDE1BQ01064 536 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 DMP1Q13316 513 aaPredicted RBP16.24■□□□□ 0.19
LMX1B-201ENST00000355497 RCN2Q14257 317 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 TMTC4Q5T4D3 741 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 ARMCX5Q6P1M9 558 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 TMTC3Q6ZXV5 915 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 ZMAT2Q96NC0 199 aaKnown RBP16.24■□□□□ 0.19
LMX1B-201ENST00000355497 PDE11AQ9HCR9 933 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 INTS9Q9NV88 658 aaKnown RBP16.24■□□□□ 0.19
LMX1B-201ENST00000355497 PCDHA12Q9UN75 941 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 ANGPTL3Q9Y5C1 460 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 TMEM191BP0C7N4 346 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 SRGAP2BP0DMP2 458 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 DLATP10515 647 aaKnown RBP16.24■□□□□ 0.19
LMX1B-201ENST00000355497 MAP7D3Q8IWC1 876 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 FAM178BQ8IXR5 827 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 RNF169Q8NCN4 708 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 CHMP6Q96FZ7 201 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 PTPN22Q9Y2R2 807 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
LMX1B-201ENST00000355497 SPATA1Q5VX52 437 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 COL4A3BPQ9Y5P4 624 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 FRMPD2Q68DX3 1309 aaPredicted RBP16.23■□□□□ 0.19
LMX1B-201ENST00000355497 CMA1P23946 247 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 NEK8Q86SG6 692 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 LCA5Q86VQ0 697 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 USP40Q9NVE5 1235 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 EEF1GP26641 437 aaKnown RBP16.23■□□□□ 0.19
LMX1B-201ENST00000355497 MYL7Q01449 175 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 GALNT17Q6IS24 598 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 RSBN1LQ6PCB5 846 aaPredicted RBP16.23■□□□□ 0.19
LMX1B-201ENST00000355497 SPC25Q9HBM1 224 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 MRPL11Q9Y3B7 192 aaKnown RBP16.23■□□□□ 0.19
LMX1B-201ENST00000355497 FRMD3A2A2Y4 597 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 SGK1O00141 431 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 CCT5P48643 541 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 AOC3Q16853 763 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 DCLK2Q8N568 766 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 PNMA6EA0A0J9YXQ4 647 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 ATP5JP18859 108 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 TSTA3Q13630 321 aaPredicted RBP16.23■□□□□ 0.19
LMX1B-201ENST00000355497 DLGAP5Q15398 846 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 LRCH2Q5VUJ6 765 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 MRFAP1L1Q96HT8 127 aa16.23■□□□□ 0.19
LMX1B-201ENST00000355497 ZNF215Q9UL58 517 aaPredicted RBP16.23■□□□□ 0.19
LMX1B-201ENST00000355497 MFAP3P55082 362 aa16.22■□□□□ 0.19
LMX1B-201ENST00000355497 ETF1P62495 437 aaKnown RBP16.22■□□□□ 0.19
LMX1B-201ENST00000355497 TCIRG1Q13488 830 aa16.22■□□□□ 0.19
LMX1B-201ENST00000355497 SLC39A2Q9NP94 309 aa16.22■□□□□ 0.19
LMX1B-201ENST00000355497 FAM193BQ96PV7 902 aaPredicted RBP16.22■□□□□ 0.19
LMX1B-201ENST00000355497 SYNJ2BP-COX16A0A087WUM0 186 aa16.22■□□□□ 0.19
LMX1B-201ENST00000355497 DTNBO60941 627 aa16.22■□□□□ 0.19
LMX1B-201ENST00000355497 RPAINQ86UA6 219 aa16.22■□□□□ 0.19
LMX1B-201ENST00000355497 SESTD1Q86VW0 696 aa16.22■□□□□ 0.19
LMX1B-201ENST00000355497 MCUQ8NE86 351 aa16.22■□□□□ 0.19
LMX1B-201ENST00000355497 SMCR8Q8TEV9 937 aaPredicted RBP16.22■□□□□ 0.19
LMX1B-201ENST00000355497 SLC52A2Q9HAB3 445 aa16.22■□□□□ 0.19
LMX1B-201ENST00000355497 FANCLQ9NW38 375 aa16.22■□□□□ 0.19
LMX1B-201ENST00000355497 BTG4Q9NY30 223 aa16.22■□□□□ 0.19
LMX1B-201ENST00000355497 COX16Q9P0S2 106 aa16.22■□□□□ 0.19
LMX1B-201ENST00000355497 BZW2Q9Y6E2 419 aaKnown RBP16.22■□□□□ 0.19
LMX1B-201ENST00000355497 EPN1Q9Y6I3 576 aaPredicted RBP16.22■□□□□ 0.19
LMX1B-201ENST00000355497 RBM6P78332 1123 aaKnown RBP16.21■□□□□ 0.19
LMX1B-201ENST00000355497 RASSF7Q02833 373 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 EHHADHQ08426 723 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 CMTR1Q8N1G2 835 aaKnown RBP16.21■□□□□ 0.19
LMX1B-201ENST00000355497 GSTA4O15217 222 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 SORBS3O60504 671 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 PFKFB2O60825 505 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 NAA35Q5VZE5 725 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 TRIM35Q9UPQ4 493 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 KCTD16Q68DU8 428 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 MCF2L2Q86YR7 1114 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 SSH2Q76I76 1423 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 MAP3K19Q56UN5 1328 aa16.21■□□□□ 0.19
LMX1B-201ENST00000355497 ZNF500O60304 480 aaPredicted RBP16.21■□□□□ 0.19
LMX1B-201ENST00000355497 EXOC3L4Q17RC7 722 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms