RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SPDYE4A6NLX3 237 aa25.01■■□□□ 1.59
NKX2-1-201ENST00000354822 FANCGO15287 622 aa25.01■■□□□ 1.59
NKX2-1-201ENST00000354822 SNHG28P0DPA3 235 aa25.01■■□□□ 1.59
NKX2-1-201ENST00000354822 RAD9BQ6WBX8 426 aa25.01■■□□□ 1.59
NKX2-1-201ENST00000354822 C7orf25Q9BPX7 421 aa25.01■■□□□ 1.59
NKX2-1-201ENST00000354822 DESI2Q9BSY9 194 aa25.01■■□□□ 1.59
NKX2-1-201ENST00000354822 TAB2Q9NYJ8 693 aa25.01■■□□□ 1.59
NKX2-1-201ENST00000354822 MAPK8IP1Q9UQF2 711 aa25.01■■□□□ 1.59
NKX2-1-201ENST00000354822 COBLO75128 1261 aa25.01■■□□□ 1.59
NKX2-1-201ENST00000354822 PLCG1P19174 1290 aa25.01■■□□□ 1.59
NKX2-1-201ENST00000354822 FXR1P51114 621 aaKnown RBP eCLIP25.01■■□□□ 1.59
NKX2-1-201ENST00000354822 WDR24Q96S15 920 aa25.01■■□□□ 1.59
NKX2-1-201ENST00000354822 IGKV6D-41A0A0C4DH26 115 aa25■■□□□ 1.59
NKX2-1-201ENST00000354822 H2AFXP16104 143 aaPredicted RBP25■■□□□ 1.59
NKX2-1-201ENST00000354822 MTF1Q14872 753 aa25■■□□□ 1.59
NKX2-1-201ENST00000354822 UBA5Q9GZZ9 404 aa25■■□□□ 1.59
NKX2-1-201ENST00000354822 RIMBP2O15034 1052 aa25■■□□□ 1.59
NKX2-1-201ENST00000354822 UBXN1Q04323 297 aa25■■□□□ 1.59
NKX2-1-201ENST00000354822 PICALMQ13492 652 aa25■■□□□ 1.59
NKX2-1-201ENST00000354822 CALML4Q96GE6 196 aa25■■□□□ 1.59
NKX2-1-201ENST00000354822 NUP88Q99567 741 aaPredicted RBP25■■□□□ 1.59
NKX2-1-201ENST00000354822 ABHD10Q9NUJ1 306 aa25■■□□□ 1.59
NKX2-1-201ENST00000354822 MAGEC2Q9UBF1 373 aaPredicted RBP25■■□□□ 1.59
NKX2-1-201ENST00000354822 TTF2Q9UNY4 1162 aaKnown RBP25■■□□□ 1.59
NKX2-1-201ENST00000354822 A0A1W2PQC6 194 aa24.99■■□□□ 1.59
NKX2-1-201ENST00000354822 BICDL2A1A5D9 508 aa24.99■■□□□ 1.59
NKX2-1-201ENST00000354822 TTLL1O95922 423 aa24.99■■□□□ 1.59
NKX2-1-201ENST00000354822 ALDH1B1P30837 517 aa24.99■■□□□ 1.59
NKX2-1-201ENST00000354822 PDE6BP35913 854 aa24.99■■□□□ 1.59
NKX2-1-201ENST00000354822 CYP26C1Q6V0L0 522 aa24.99■■□□□ 1.59
NKX2-1-201ENST00000354822 IRF2BP1Q8IU81 584 aa24.99■■□□□ 1.59
NKX2-1-201ENST00000354822 KIFC2Q96AC6 838 aa24.99■■□□□ 1.59
NKX2-1-201ENST00000354822 MRPL44Q9H9J2 332 aaKnown RBP24.99■■□□□ 1.59
NKX2-1-201ENST00000354822 BIN2Q9UBW5 565 aaPredicted RBP24.99■■□□□ 1.59
NKX2-1-201ENST00000354822 SERPINB13Q9UIV8 391 aa24.99■■□□□ 1.59
NKX2-1-201ENST00000354822 ARHGAP29Q52LW3 1261 aa24.98■■□□□ 1.59
NKX2-1-201ENST00000354822 PPP1R18Q6NYC8 613 aa24.98■■□□□ 1.59
NKX2-1-201ENST00000354822 CREBRFQ8IUR6 639 aa24.98■■□□□ 1.59
NKX2-1-201ENST00000354822 PLIN2Q99541 437 aa24.98■■□□□ 1.59
NKX2-1-201ENST00000354822 TRIM9Q9C026 710 aa24.98■■□□□ 1.59
NKX2-1-201ENST00000354822 KIF5CO60282 957 aa24.98■■□□□ 1.59
NKX2-1-201ENST00000354822 TADA3O75528 432 aa24.98■■□□□ 1.59
NKX2-1-201ENST00000354822 TECP42680 631 aa24.98■■□□□ 1.59
NKX2-1-201ENST00000354822 ADCY7P51828 1080 aa24.98■■□□□ 1.59
NKX2-1-201ENST00000354822 JAKMIP3Q5VZ66 844 aa24.98■■□□□ 1.59
NKX2-1-201ENST00000354822 CARD6Q9BX69 1037 aa24.98■■□□□ 1.59
NKX2-1-201ENST00000354822 MRFAP1Q9Y605 127 aa24.98■■□□□ 1.59
NKX2-1-201ENST00000354822 C10orf71Q711Q0 1435 aa24.98■■□□□ 1.59
NKX2-1-201ENST00000354822 AKR1B1P15121 316 aa24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 HHIPL2Q6UWX4 724 aa24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 LRRN4CLQ8ND94 238 aa24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 TRIM47Q96LD4 638 aa24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 EXOC1Q9NV70 894 aa24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 USP40Q9NVE5 1235 aa24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 ARGLU1Q9NWB6 273 aaPredicted RBP24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 LGALS16A8MUM7 142 aa24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 MMP10P09238 476 aa24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 TUBB2AQ13885 445 aa24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 COBLL1Q53SF7 1204 aa24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 DPP8Q6V1X1 898 aaPredicted RBP24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 MB21D1Q8N884 522 aa24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 MTMR9Q96QG7 549 aa24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 TUBB2BQ9BVA1 445 aa24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 RAB34Q9BZG1 259 aa24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 TMX4Q9H1E5 349 aaPredicted RBP24.97■■□□□ 1.59
NKX2-1-201ENST00000354822 COL11A2P13942 1736 aaPredicted RBP24.96■■□□□ 1.59
NKX2-1-201ENST00000354822 FRMPD2Q68DX3 1309 aaPredicted RBP24.96■■□□□ 1.59
NKX2-1-201ENST00000354822 TRIM49BA6NDI0 452 aa24.96■■□□□ 1.59
NKX2-1-201ENST00000354822 FXR2P51116 673 aaKnown RBP eCLIP24.96■■□□□ 1.59
NKX2-1-201ENST00000354822 TMEM266Q2M3C6 531 aa24.96■■□□□ 1.59
NKX2-1-201ENST00000354822 TTI2Q6NXR4 508 aa24.96■■□□□ 1.59
NKX2-1-201ENST00000354822 PNMA6FA0A0J9YX94 578 aa24.95■■□□□ 1.59
NKX2-1-201ENST00000354822 CCNE1P24864 410 aa24.95■■□□□ 1.59
NKX2-1-201ENST00000354822 HOXA7P31268 230 aaPredicted RBP24.95■■□□□ 1.59
NKX2-1-201ENST00000354822 KRT9P35527 623 aa24.95■■□□□ 1.59
NKX2-1-201ENST00000354822 PDE4DQ08499 809 aa24.95■■□□□ 1.59
NKX2-1-201ENST00000354822 PDIA5Q14554 519 aa24.95■■□□□ 1.59
NKX2-1-201ENST00000354822 CALCRLQ16602 461 aa24.95■■□□□ 1.59
NKX2-1-201ENST00000354822 FAM114A1Q8IWE2 563 aa24.95■■□□□ 1.59
NKX2-1-201ENST00000354822 HLA-DOAP06340 250 aa24.95■■□□□ 1.58
NKX2-1-201ENST00000354822 DNM2P50570 870 aa24.95■■□□□ 1.58
NKX2-1-201ENST00000354822 PMS1P54277 932 aaKnown RBP24.95■■□□□ 1.58
NKX2-1-201ENST00000354822 GPATCH4Q5T3I0 446 aaKnown RBP24.95■■□□□ 1.58
NKX2-1-201ENST00000354822 CNNM4Q6P4Q7 775 aa24.95■■□□□ 1.58
NKX2-1-201ENST00000354822 LRRC47Q8N1G4 583 aaKnown RBP24.95■■□□□ 1.58
NKX2-1-201ENST00000354822 CERS5Q8N5B7 392 aa24.95■■□□□ 1.58
NKX2-1-201ENST00000354822 LRRC15Q8TF66 581 aa24.95■■□□□ 1.58
NKX2-1-201ENST00000354822 MASTLQ96GX5 879 aa24.95■■□□□ 1.58
NKX2-1-201ENST00000354822 LZTFL1Q9NQ48 299 aa24.95■■□□□ 1.58
NKX2-1-201ENST00000354822 STK17AQ9UEE5 414 aa24.95■■□□□ 1.58
NKX2-1-201ENST00000354822 F8W031 263 aaPredicted RBP24.94■■□□□ 1.58
NKX2-1-201ENST00000354822 ZNF543Q08ER8 600 aa24.94■■□□□ 1.58
NKX2-1-201ENST00000354822 SV2BQ7L1I2 683 aa24.94■■□□□ 1.58
NKX2-1-201ENST00000354822 ZNF507Q8TCN5 953 aa24.94■■□□□ 1.58
NKX2-1-201ENST00000354822 P2RX5Q93086 422 aa24.94■■□□□ 1.58
NKX2-1-201ENST00000354822 MMTAG2Q9BU76 263 aaKnown RBP24.94■■□□□ 1.58
NKX2-1-201ENST00000354822 DDX4Q9NQI0 724 aaKnown RBP24.94■■□□□ 1.58
NKX2-1-201ENST00000354822 QSER1Q2KHR3 1735 aa24.94■■□□□ 1.58
NKX2-1-201ENST00000354822 TXKP42681 527 aa24.94■■□□□ 1.58
NKX2-1-201ENST00000354822 ASIC1P78348 528 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms