RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 FAM126BQ8IXS8 530 aa18.78■□□□□ 0.6
PDGFA-201ENST00000354513 RNPC3Q96LT9 517 aaKnown RBP18.78■□□□□ 0.6
PDGFA-201ENST00000354513 RANBP17Q9H2T7 1088 aaKnown RBP18.78■□□□□ 0.6
PDGFA-201ENST00000354513 CYP39A1Q9NYL5 469 aa18.78■□□□□ 0.6
PDGFA-201ENST00000354513 SCN5AQ14524 2016 aa18.78■□□□□ 0.6
PDGFA-201ENST00000354513 ZMYM6O95789 1325 aa18.78■□□□□ 0.6
PDGFA-201ENST00000354513 DCDC2CA8MYV0 355 aa18.77■□□□□ 0.6
PDGFA-201ENST00000354513 RANBP6O60518 1105 aaKnown RBP18.77■□□□□ 0.6
PDGFA-201ENST00000354513 TIMP1P01033 207 aa18.77■□□□□ 0.6
PDGFA-201ENST00000354513 FGAP02671 866 aa18.77■□□□□ 0.6
PDGFA-201ENST00000354513 IKQ13123 557 aaPredicted RBP18.77■□□□□ 0.6
PDGFA-201ENST00000354513 NMIQ13287 307 aaPredicted RBP18.77■□□□□ 0.6
PDGFA-201ENST00000354513 TAPT1Q6NXT6 567 aa18.77■□□□□ 0.6
PDGFA-201ENST00000354513 BTNL9Q6UXG8 535 aa18.77■□□□□ 0.6
PDGFA-201ENST00000354513 C16orf59Q7L2K0 433 aa18.77■□□□□ 0.6
PDGFA-201ENST00000354513 PCSK9Q8NBP7 692 aaKnown RBP18.77■□□□□ 0.6
PDGFA-201ENST00000354513 GLT1D1Q96MS3 346 aa18.77■□□□□ 0.6
PDGFA-201ENST00000354513 PDGFCQ9NRA1 345 aa18.77■□□□□ 0.6
PDGFA-201ENST00000354513 MTMR7Q9Y216 660 aa18.77■□□□□ 0.6
PDGFA-201ENST00000354513 KIAA1217Q5T5P2 1943 aa18.77■□□□□ 0.6
PDGFA-201ENST00000354513 GRIN2DO15399 1336 aa18.77■□□□□ 0.6
PDGFA-201ENST00000354513 A0A0U1RQG5 324 aaPredicted RBP18.76■□□□□ 0.59
PDGFA-201ENST00000354513 ARVCFO00192 962 aa18.76■□□□□ 0.59
PDGFA-201ENST00000354513 CD4P01730 458 aa18.76■□□□□ 0.59
PDGFA-201ENST00000354513 GNASQ5JWF2 1037 aa18.76■□□□□ 0.59
PDGFA-201ENST00000354513 SLC43A3Q8NBI5 491 aa18.76■□□□□ 0.59
PDGFA-201ENST00000354513 MORC4Q8TE76 937 aa18.76■□□□□ 0.59
PDGFA-201ENST00000354513 DCAF4Q8WV16 495 aa18.76■□□□□ 0.59
PDGFA-201ENST00000354513 MYLIPQ8WY64 445 aa18.76■□□□□ 0.59
PDGFA-201ENST00000354513 TMEM47Q9BQJ4 181 aa18.76■□□□□ 0.59
PDGFA-201ENST00000354513 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.76■□□□□ 0.59
PDGFA-201ENST00000354513 SCN10AQ9Y5Y9 1956 aa18.76■□□□□ 0.59
PDGFA-201ENST00000354513 ICAM1P05362 532 aa18.75■□□□□ 0.59
PDGFA-201ENST00000354513 HSPD1P10809 573 aaKnown RBP18.75■□□□□ 0.59
PDGFA-201ENST00000354513 SMPD1P17405 629 aa18.75■□□□□ 0.59
PDGFA-201ENST00000354513 SLC16A2P36021 539 aa18.75■□□□□ 0.59
PDGFA-201ENST00000354513 TNFAIP2Q03169 654 aa18.75■□□□□ 0.59
PDGFA-201ENST00000354513 MCMDC2Q4G0Z9 681 aa18.75■□□□□ 0.59
PDGFA-201ENST00000354513 PPP4R3BQ5MIZ7 849 aa18.75■□□□□ 0.59
PDGFA-201ENST00000354513 MFSD5Q6N075 450 aa18.75■□□□□ 0.59
PDGFA-201ENST00000354513 TBC1D10CQ8IV04 446 aa18.75■□□□□ 0.59
PDGFA-201ENST00000354513 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.75■□□□□ 0.59
PDGFA-201ENST00000354513 FBXO16Q8IX29 292 aaPredicted RBP18.75■□□□□ 0.59
PDGFA-201ENST00000354513 CCPG1Q9ULG6 757 aa18.75■□□□□ 0.59
PDGFA-201ENST00000354513 PTPRSQ13332 1948 aa18.75■□□□□ 0.59
PDGFA-201ENST00000354513 MROH7Q68CQ1 1323 aa18.75■□□□□ 0.59
PDGFA-201ENST00000354513 FRMPD2Q68DX3 1309 aaPredicted RBP18.75■□□□□ 0.59
PDGFA-201ENST00000354513 VCANP13611 3396 aa18.75■□□□□ 0.59
PDGFA-201ENST00000354513 ASB14A6NK59 587 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 NFIBO00712 420 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 CCDC96Q2M329 555 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 RASIP1Q5U651 963 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 TLK2Q86UE8 772 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 COL25A1Q9BXS0 654 aaPredicted RBP18.74■□□□□ 0.59
PDGFA-201ENST00000354513 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 TCP11L1Q9NUJ3 509 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 CCDC171Q6TFL3 1326 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 CUL9Q8IWT3 2517 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 HAND2P61296 217 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 RRP12Q5JTH9 1297 aaKnown RBP18.74■□□□□ 0.59
PDGFA-201ENST00000354513 TMEM240Q5SV17 173 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 SYDE2Q5VT97 1194 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 CXCL17Q6UXB2 119 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 EEPD1Q7L9B9 569 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 SMC5Q8IY18 1101 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 SPC25Q9HBM1 224 aa18.74■□□□□ 0.59
PDGFA-201ENST00000354513 UMODL1Q5DID0 1318 aa18.73■□□□□ 0.59
PDGFA-201ENST00000354513 REV3LO60673 3130 aa18.73■□□□□ 0.59
PDGFA-201ENST00000354513 PDHBP11177 359 aa18.73■□□□□ 0.59
PDGFA-201ENST00000354513 TOP1P11387 765 aaKnown RBP18.73■□□□□ 0.59
PDGFA-201ENST00000354513 CSF2RAP15509 400 aa18.73■□□□□ 0.59
PDGFA-201ENST00000354513 NSMFQ6X4W1 530 aa18.73■□□□□ 0.59
PDGFA-201ENST00000354513 SLC30A10Q6XR72 485 aa18.73■□□□□ 0.59
PDGFA-201ENST00000354513 CLEC4DQ8WXI8 215 aa18.73■□□□□ 0.59
PDGFA-201ENST00000354513 PPP1R12CQ9BZL4 782 aa18.73■□□□□ 0.59
PDGFA-201ENST00000354513 GPCPD1Q9NPB8 672 aa18.73■□□□□ 0.59
PDGFA-201ENST00000354513 NEDD4P46934 1319 aa18.72■□□□□ 0.59
PDGFA-201ENST00000354513 TMEM265A0A087WTH1 108 aa18.72■□□□□ 0.59
PDGFA-201ENST00000354513 SNHG28P0DPA3 235 aa18.72■□□□□ 0.59
PDGFA-201ENST00000354513 DNAJB2P25686 324 aa18.72■□□□□ 0.59
PDGFA-201ENST00000354513 ALDH5A1P51649 535 aaPredicted RBP18.72■□□□□ 0.59
PDGFA-201ENST00000354513 BAATQ14032 418 aaPredicted RBP18.72■□□□□ 0.59
PDGFA-201ENST00000354513 FSCN1Q16658 493 aaKnown RBP18.72■□□□□ 0.59
PDGFA-201ENST00000354513 MAFAQ8NHW3 353 aaPredicted RBP18.72■□□□□ 0.59
PDGFA-201ENST00000354513 CHD7Q9P2D1 2997 aa18.71■□□□□ 0.59
PDGFA-201ENST00000354513 ACRP10323 421 aa18.71■□□□□ 0.59
PDGFA-201ENST00000354513 CYP2C18P33260 490 aa18.71■□□□□ 0.59
PDGFA-201ENST00000354513 TICAM2Q86XR7 235 aa18.71■□□□□ 0.59
PDGFA-201ENST00000354513 VTI1AQ96AJ9 217 aa18.71■□□□□ 0.59
PDGFA-201ENST00000354513 VWCEQ96DN2 955 aa18.71■□□□□ 0.59
PDGFA-201ENST00000354513 VTA1Q9NP79 307 aa18.71■□□□□ 0.59
PDGFA-201ENST00000354513 TOMM22Q9NS69 142 aa18.71■□□□□ 0.59
PDGFA-201ENST00000354513 GRXCR1A8MXD5 290 aa18.7■□□□□ 0.58
PDGFA-201ENST00000354513 DYNC1LI2O43237 492 aaPredicted RBP18.7■□□□□ 0.58
PDGFA-201ENST00000354513 PBX2P40425 430 aa18.7■□□□□ 0.58
PDGFA-201ENST00000354513 PSMC6P62333 389 aa18.7■□□□□ 0.58
PDGFA-201ENST00000354513 ZNF543Q08ER8 600 aa18.7■□□□□ 0.58
PDGFA-201ENST00000354513 PPIGQ13427 754 aaKnown RBP eCLIP18.7■□□□□ 0.58
PDGFA-201ENST00000354513 GRIN2CQ14957 1233 aa18.7■□□□□ 0.58
PDGFA-201ENST00000354513 AKNAD1Q5T1N1 836 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms