RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 LETM2Q2VYF4 491 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 SMIM5Q71RC9 77 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 TRAPPC11Q7Z392 1133 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 WDR66Q8TBY9 1149 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 P2RX5Q93086 422 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 JAKMIP2Q96AA8 810 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 AK8Q96MA6 479 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 SUGCTQ9HAC7 445 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 RNF216Q9NWF9 866 aaPredicted RBP13.57□□□□□ -0.24
DDX4-201ENST00000353507 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
DDX4-201ENST00000353507 CCNT1O60563 726 aaKnown RBP13.57□□□□□ -0.24
DDX4-201ENST00000353507 SRGNP10124 158 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 CCNE1P24864 410 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 GSTO1P78417 241 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 TBC1D8BQ0IIM8 1120 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 CASP8Q14790 479 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 KRT25Q7Z3Z0 450 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 CCDC102AQ96A19 550 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 CNOT6LQ96LI5 555 aaKnown RBP13.57□□□□□ -0.24
DDX4-201ENST00000353507 LZTS2Q9BRK4 669 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 SAR1BQ9Y6B6 198 aa13.57□□□□□ -0.24
DDX4-201ENST00000353507 CNTNAP4Q9C0A0 1308 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 GOLGA8HP0CJ92 632 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 NONOQ15233 471 aaKnown RBP eCLIP13.56□□□□□ -0.24
DDX4-201ENST00000353507 WDR59Q6PJI9 974 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 MSL3Q8N5Y2 521 aaKnown RBP13.56□□□□□ -0.24
DDX4-201ENST00000353507 RETREG2Q8NC44 543 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 SLC44A5Q8NCS7 719 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 TGFBRAP1Q8WUH2 860 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 TMEM47Q9BQJ4 181 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 PSD3Q9NYI0 1048 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 ANKIB1Q9P2G1 1089 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 HDAC6Q9UBN7 1215 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 SRP68Q9UHB9 627 aaKnown RBP13.56□□□□□ -0.24
DDX4-201ENST00000353507 SPATA31A5Q5VU36 1347 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 SPATA31A7Q8IWB4 1347 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 KLRF2D3W0D1 207 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 ZPR1O75312 459 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 ATP1A1P05023 1023 aaKnown RBP13.56□□□□□ -0.24
DDX4-201ENST00000353507 PPP1R2P41236 205 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 CKAP4Q07065 602 aaKnown RBP13.56□□□□□ -0.24
DDX4-201ENST00000353507 TXNRD1Q16881 649 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 TPTE2Q6XPS3 522 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 CAGE1Q8TC20 777 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 ZBTB9Q96C00 473 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 EEF2KMTQ96G04 330 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 TRIM9Q9C026 710 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 ZNF287Q9HBT7 754 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 MKRN1Q9UHC7 482 aaKnown RBP13.56□□□□□ -0.24
DDX4-201ENST00000353507 ZNF831Q5JPB2 1677 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 FLT1P17948 1338 aa13.56□□□□□ -0.24
DDX4-201ENST00000353507 RGL2O15211 777 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 MCM3P25205 808 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 AMPD3Q01432 767 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 DIXDC1Q155Q3 683 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 MEA1Q16626 185 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 ZSCAN26Q16670 478 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 SLC35G1Q2M3R5 365 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 FKBP15Q5T1M5 1219 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 SOGA3Q5TF21 947 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 WDR93Q6P2C0 686 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 CAPZA3Q96KX2 299 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 DUSP9Q99956 384 aaKnown RBP13.55□□□□□ -0.24
DDX4-201ENST00000353507 NOC4LQ9BVI4 516 aaKnown RBP13.55□□□□□ -0.24
DDX4-201ENST00000353507 C6orf50Q9HD87 102 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 AGPAT5Q9NUQ2 364 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 SEC63Q9UGP8 760 aaKnown RBP13.55□□□□□ -0.24
DDX4-201ENST00000353507 NARFQ9UHQ1 456 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 SAP30BPQ9UHR5 308 aaKnown RBP13.55□□□□□ -0.24
DDX4-201ENST00000353507 TFR2Q9UP52 801 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 COL24A1Q17RW2 1714 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 PALM3A6NDB9 673 aaPredicted RBP13.55□□□□□ -0.24
DDX4-201ENST00000353507 GNA11P29992 359 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 ZBED6P86452 979 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 MAP9Q49MG5 647 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 MAPKAPK5Q8IW41 473 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 LRRC15Q8TF66 581 aa13.55□□□□□ -0.24
DDX4-201ENST00000353507 CWC15Q9P013 229 aaKnown RBP13.55□□□□□ -0.24
DDX4-201ENST00000353507 MUM1L1Q5H9M0 696 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 CNNM4Q6P4Q7 775 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 AEBP2Q6ZN18 517 aaPredicted RBP13.54□□□□□ -0.24
DDX4-201ENST00000353507 NEK8Q86SG6 692 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 CCDC170Q8IYT3 715 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 CALML4Q96GE6 196 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 ZMYND12Q9H0C1 365 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 NHEJ1Q9H9Q4 299 aaPredicted RBP13.54□□□□□ -0.24
DDX4-201ENST00000353507 SBF2Q86WG5 1849 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 SMCO2A6NFE2 343 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 TNNT3P45378 269 aaPredicted RBP13.54□□□□□ -0.24
DDX4-201ENST00000353507 KLK7P49862 253 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 ANKRD40Q6AI12 368 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 LEKR1Q6ZMV7 388 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 RRP36Q96EU6 259 aaKnown RBP13.54□□□□□ -0.24
DDX4-201ENST00000353507 RPGRIP1Q96KN7 1286 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 SPZ1Q9BXG8 430 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 TTYH3Q9C0H2 523 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 CPVLQ9H3G5 476 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 FAN1Q9Y2M0 1017 aa13.54□□□□□ -0.24
DDX4-201ENST00000353507 EIF3CLB5ME19 914 aaKnown RBP13.54□□□□□ -0.24
DDX4-201ENST00000353507 SRGAP2O75044 1071 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms