RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CRAMP1Q96RY5 1269 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 PPP1R16BQ96T49 567 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 RABGAP1Q9Y3P9 1069 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 RPN1P04843 607 aaKnown RBP15.21■□□□□ 0.03
SMC6-201ENST00000351948 CBX1P83916 185 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 MAATS1Q7Z4T9 603 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 SEPT9Q9UHD8 586 aaPredicted RBP15.21■□□□□ 0.03
SMC6-201ENST00000351948 KIAA1210Q9ULL0 1709 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 LMAN1P49257 510 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 POLGP54098 1239 aaPredicted RBP15.21■□□□□ 0.03
SMC6-201ENST00000351948 OXER1Q8TDS5 423 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 KAZALD1Q96I82 304 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 IL25Q9H293 177 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 LY9Q9HBG7 655 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 SLC5A4Q9NY91 659 aa15.21■□□□□ 0.03
SMC6-201ENST00000351948 GYS1P13807 737 aa15.21■□□□□ 0.02
SMC6-201ENST00000351948 TAF12Q16514 161 aa15.21■□□□□ 0.02
SMC6-201ENST00000351948 PSMD1Q99460 953 aa15.21■□□□□ 0.02
SMC6-201ENST00000351948 RAVER2Q9HCJ3 691 aaKnown RBP15.21■□□□□ 0.02
SMC6-201ENST00000351948 CNTNAP4Q9C0A0 1308 aa15.21■□□□□ 0.02
SMC6-201ENST00000351948 GOLGA6L10A0A0M3HER8 536 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 ERICH4A6NGS2 130 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 DLATP10515 647 aaKnown RBP15.2■□□□□ 0.02
SMC6-201ENST00000351948 LONP1P36776 959 aaKnown RBP15.2■□□□□ 0.02
SMC6-201ENST00000351948 FAM26FQ5R3K3 315 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 ODR4Q5SWX8 454 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 SPC25Q9HBM1 224 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 RRAGAQ7L523 313 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 KRT26Q7Z3Y9 468 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 MICALL2Q8IY33 904 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 POLD4Q9HCU8 107 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 ANKFY1Q9P2R3 1169 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 ZHX1Q9UKY1 873 aaPredicted RBP15.2■□□□□ 0.02
SMC6-201ENST00000351948 PAXBP1Q9Y5B6 917 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 TAF6LQ9Y6J9 622 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 ITSN1Q15811 1721 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 KDM6AO15550 1401 aaPredicted RBP15.2■□□□□ 0.02
SMC6-201ENST00000351948 PNMA6FA0A0J9YX94 578 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 MORC3Q14149 939 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 GAS2L3Q86XJ1 694 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 OTUD5Q96G74 571 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 POLR3EQ9NVU0 708 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 STK24Q9Y6E0 443 aa15.2■□□□□ 0.02
SMC6-201ENST00000351948 PLEKHG2Q9H7P9 1386 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 RESTQ13127 1097 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 CCDC84Q86UT8 332 aaPredicted RBP15.19■□□□□ 0.02
SMC6-201ENST00000351948 SLF1Q9BQI6 1058 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 PLVAPQ9BX97 442 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 MYO3BQ8WXR4 1341 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 KCNJ18B7U540 433 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 RHOXF2BP0C7M4 288 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 LIG4P49917 911 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 KCNJ12Q14500 433 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 ASIC2Q16515 512 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 GSTA5Q7RTV2 222 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 LARP4BQ92615 738 aaKnown RBP15.19■□□□□ 0.02
SMC6-201ENST00000351948 TTC14Q96N46 770 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 RHOXF2Q9BQY4 288 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 ZNF609O15014 1411 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 NCOA3Q9Y6Q9 1424 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 M0QZ92 97 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 GTPBP6O43824 516 aaPredicted RBP15.19■□□□□ 0.02
SMC6-201ENST00000351948 OSBPP22059 807 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 STAG2Q8N3U4 1231 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 MROH1Q8NDA8 1641 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 F5H6K3 240 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 KLRC3Q07444 240 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 PTPROQ16827 1216 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 SELENOOQ9BVL4 669 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 LARSQ9P2J5 1176 aaKnown RBP15.19■□□□□ 0.02
SMC6-201ENST00000351948 ZNRF3Q9ULT6 936 aa15.19■□□□□ 0.02
SMC6-201ENST00000351948 DEPDC5O75140 1603 aa15.18■□□□□ 0.02
SMC6-201ENST00000351948 STX10O60499 249 aa15.18■□□□□ 0.02
SMC6-201ENST00000351948 CCNA1P78396 465 aa15.18■□□□□ 0.02
SMC6-201ENST00000351948 KIF22Q14807 665 aa15.18■□□□□ 0.02
SMC6-201ENST00000351948 DPCR1Q3MIW9 517 aa15.18■□□□□ 0.02
SMC6-201ENST00000351948 TYW1BQ6NUM6 668 aa15.18■□□□□ 0.02
SMC6-201ENST00000351948 MAP2P11137 1827 aaKnown RBP15.18■□□□□ 0.02
SMC6-201ENST00000351948 DCCP43146 1447 aa15.18■□□□□ 0.02
SMC6-201ENST00000351948 PTF1AQ7RTS3 328 aa15.18■□□□□ 0.02
SMC6-201ENST00000351948 PROCA1Q8NCQ7 364 aaPredicted RBP15.18■□□□□ 0.02
SMC6-201ENST00000351948 CNOT7Q9UIV1 285 aaKnown RBP15.18■□□□□ 0.02
SMC6-201ENST00000351948 MCM6Q14566 821 aa15.18■□□□□ 0.02
SMC6-201ENST00000351948 ANO3Q9BYT9 981 aa15.18■□□□□ 0.02
SMC6-201ENST00000351948 TMEM260Q9NX78 707 aa15.18■□□□□ 0.02
SMC6-201ENST00000351948 XRCC5P13010 732 aaKnown RBP15.18■□□□□ 0.02
SMC6-201ENST00000351948 CDAN1Q8IWY9 1227 aa15.18■□□□□ 0.02
SMC6-201ENST00000351948 APOL6Q9BWW8 343 aa15.18■□□□□ 0.02
SMC6-201ENST00000351948 KLHL30Q0D2K2 578 aa15.17■□□□□ 0.02
SMC6-201ENST00000351948 SPOPO43791 374 aa15.17■□□□□ 0.02
SMC6-201ENST00000351948 RASA3Q14644 834 aa15.17■□□□□ 0.02
SMC6-201ENST00000351948 MCTP2Q6DN12 878 aa15.17■□□□□ 0.02
SMC6-201ENST00000351948 COL4A3BPQ9Y5P4 624 aa15.17■□□□□ 0.02
SMC6-201ENST00000351948 MARK3P27448 753 aa15.17■□□□□ 0.02
SMC6-201ENST00000351948 ADAM9Q13443 819 aa15.17■□□□□ 0.02
SMC6-201ENST00000351948 APBB1IPQ7Z5R6 666 aaPredicted RBP15.17■□□□□ 0.02
SMC6-201ENST00000351948 LMBR1Q8WVP7 490 aa15.17■□□□□ 0.02
SMC6-201ENST00000351948 LSM14BQ9BX40 385 aaKnown RBP15.17■□□□□ 0.02
SMC6-201ENST00000351948 TRAPPC10P48553 1259 aa15.17■□□□□ 0.02
SMC6-201ENST00000351948 CTTNQ14247 550 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms