RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 COL14A1Q05707 1796 aaKnown RBP20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 RASA1P20936 1047 aa20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 NAPAP54920 295 aa20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 TUBB2AQ13885 445 aa20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 FAM98CQ17RN3 349 aaKnown RBP20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 TSR1Q2NL82 804 aaKnown RBP20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 FAM182BQ5T319 152 aa20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 SMCR8Q8TEV9 937 aaPredicted RBP20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 ZFP91Q96JP5 570 aaPredicted RBP20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 TUBB2BQ9BVA1 445 aa20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 NHEJ1Q9H9Q4 299 aaPredicted RBP20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 A0A1B0GUL6 1792 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 A0A1W2PQC6 194 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 MACROD2A1Z1Q3 448 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 KIAA1328Q86T90 577 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 ANKS1AQ92625 1134 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 CNOT6LQ96LI5 555 aaKnown RBP20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 TTYH3Q9C0H2 523 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 HAUS4Q9H6D7 363 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 SLC39A2Q9NP94 309 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 EXOC1Q9NV70 894 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 TMEM260Q9NX78 707 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 BIN2Q9UBW5 565 aaPredicted RBP20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 SMCO2A6NFE2 343 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 ERLIN1O75477 346 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 DNM2P50570 870 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 STIM1Q13586 685 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 P2RX5Q93086 422 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 CCDC102AQ96A19 550 aa20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 MMTAG2Q9BU76 263 aaKnown RBP20.25■□□□□ 0.83
PTP4A3-202ENST00000349124 IRS2Q9Y4H2 1338 aa20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 POTEB2H3BUK9 544 aa20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 PDE2AO00408 941 aaPredicted RBP20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 PSMD14O00487 310 aa20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 MTIF2P46199 727 aaKnown RBP20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 IRX5P78411 483 aaPredicted RBP20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 MIIPQ5JXC2 388 aa20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 THRAP3Q9Y2W1 955 aaKnown RBP20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 SPATA31A5Q5VU36 1347 aa20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 SPATA31A7Q8IWB4 1347 aa20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 ZNF263O14978 683 aa20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 EPHB6O15197 1021 aa20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 GNPATO15228 680 aa20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 ZSCAN26Q16670 478 aa20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 GSPT2Q8IYD1 628 aaKnown RBP20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 TXLNBQ8N3L3 684 aa20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 JAKMIP2Q96AA8 810 aa20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 TCP11L1Q9NUJ3 509 aa20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 SAR1BQ9Y6B6 198 aa20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 COL16A1Q07092 1604 aaPredicted RBP20.24■□□□□ 0.83
PTP4A3-202ENST00000349124 KDM4FA0A1W2PPD8 638 aa20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 OR52Z1P0C646 297 aa20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 GNAQP50148 359 aa20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 MRPS25P82663 173 aaKnown RBP20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 TPTE2Q6XPS3 522 aa20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 NOC4LQ9BVI4 516 aaKnown RBP20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 SEMA6BQ9H3T3 888 aa20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 CAPN2P17655 700 aa20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 CCNE1P24864 410 aa20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 TXKP42681 527 aa20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 GPS2Q13227 327 aa20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 MEA1Q16626 185 aa20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 KIAA0895Q8NCT3 520 aa20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 CCDC148Q8NFR7 591 aa20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 NARFQ9UHQ1 456 aa20.23■□□□□ 0.83
PTP4A3-202ENST00000349124 ZPR1O75312 459 aa20.22■□□□□ 0.83
PTP4A3-202ENST00000349124 POTEDQ86YR6 584 aa20.22■□□□□ 0.83
PTP4A3-202ENST00000349124 DAGLBQ8NCG7 672 aa20.22■□□□□ 0.83
PTP4A3-202ENST00000349124 TBCKQ8TEA7 893 aa20.22■□□□□ 0.83
PTP4A3-202ENST00000349124 DHTKD1Q96HY7 919 aaPredicted RBP20.22■□□□□ 0.83
PTP4A3-202ENST00000349124 PIGSQ96S52 555 aa20.22■□□□□ 0.83
PTP4A3-202ENST00000349124 ZMYND12Q9H0C1 365 aa20.22■□□□□ 0.83
PTP4A3-202ENST00000349124 ATP2B2Q01814 1243 aa20.22■□□□□ 0.83
PTP4A3-202ENST00000349124 SPTY2D1Q68D10 685 aaPredicted RBP20.22■□□□□ 0.83
PTP4A3-202ENST00000349124 DYMQ7RTS9 669 aa20.22■□□□□ 0.83
PTP4A3-202ENST00000349124 EXOC4Q96A65 974 aa20.22■□□□□ 0.83
PTP4A3-202ENST00000349124 UIMC1Q96RL1 719 aa20.22■□□□□ 0.83
PTP4A3-202ENST00000349124 GOLGB1Q14789 3259 aaKnown RBP20.22■□□□□ 0.83
PTP4A3-202ENST00000349124 USP14P54578 494 aa20.21■□□□□ 0.83
PTP4A3-202ENST00000349124 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.21■□□□□ 0.83
PTP4A3-202ENST00000349124 RIN2Q8WYP3 895 aaPredicted RBP20.21■□□□□ 0.83
PTP4A3-202ENST00000349124 DRC1Q96MC2 740 aa20.21■□□□□ 0.83
PTP4A3-202ENST00000349124 SCN7AQ01118 1682 aa20.21■□□□□ 0.83
PTP4A3-202ENST00000349124 MYBL2P10244 700 aa20.21■□□□□ 0.83
PTP4A3-202ENST00000349124 CDK8P49336 464 aa20.21■□□□□ 0.83
PTP4A3-202ENST00000349124 GLIS3Q8NEA6 775 aa20.21■□□□□ 0.83
PTP4A3-202ENST00000349124 EYA3Q99504 573 aa20.21■□□□□ 0.83
PTP4A3-202ENST00000349124 NYXQ9GZU5 481 aa20.21■□□□□ 0.83
PTP4A3-202ENST00000349124 DLEC1Q9Y238 1755 aa20.21■□□□□ 0.83
PTP4A3-202ENST00000349124 RAD51AP2Q09MP3 1159 aa20.2■□□□□ 0.82
PTP4A3-202ENST00000349124 NONOQ15233 471 aaKnown RBP eCLIP20.2■□□□□ 0.824e-7■■■■□ 19.9
PTP4A3-202ENST00000349124 PAPD7Q5XG87 772 aaKnown RBP20.2■□□□□ 0.82
PTP4A3-202ENST00000349124 FOXR1Q6PIV2 292 aa20.2■□□□□ 0.82
PTP4A3-202ENST00000349124 GJA10Q969M2 543 aa20.2■□□□□ 0.82
PTP4A3-202ENST00000349124 FAM207AQ9NSI2 230 aaPredicted RBP20.2■□□□□ 0.82
PTP4A3-202ENST00000349124 LRWD1Q9UFC0 647 aa20.2■□□□□ 0.82
PTP4A3-202ENST00000349124 LCMT1Q9UIC8 334 aa20.2■□□□□ 0.82
PTP4A3-202ENST00000349124 ARHGEF1Q92888 912 aaKnown RBP20.2■□□□□ 0.82
PTP4A3-202ENST00000349124 NUDT12Q9BQG2 462 aa20.2■□□□□ 0.82
PTP4A3-202ENST00000349124 USP17L5A8MUK1 530 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms