RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 GSPT1P15170 499 aaKnown RBP16.98■□□□□ 0.31
PTPRO-202ENST00000348962 ADAM9Q13443 819 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 APOA5Q6Q788 366 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 U2AF1L4Q8WU68 220 aaKnown RBP16.98■□□□□ 0.31
PTPRO-202ENST00000348962 IFIH1Q9BYX4 1025 aaKnown RBP16.98■□□□□ 0.31
PTPRO-202ENST00000348962 ZNF215Q9UL58 517 aaPredicted RBP16.98■□□□□ 0.31
PTPRO-202ENST00000348962 TPCN1Q9ULQ1 816 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 KIAA1024Q9UPX6 916 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 SCYL2Q6P3W7 929 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 CUEDC2Q9H467 287 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 ZSCAN20P17040 1043 aaPredicted RBP16.98■□□□□ 0.31
PTPRO-202ENST00000348962 PPM1KQ8N3J5 372 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 ARHGEF37A1IGU5 675 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 CCND2P30279 289 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 ZNF75DP51815 510 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 SARNPP82979 210 aaKnown RBP16.98■□□□□ 0.31
PTPRO-202ENST00000348962 SYDE2Q5VT97 1194 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 MIGA2Q7L4E1 593 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 OR8K1Q8NGG5 319 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 APOL6Q9BWW8 343 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 AMFRQ9UKV5 643 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 PCDHA4Q9UN74 947 aa16.98■□□□□ 0.31
PTPRO-202ENST00000348962 BRD1O95696 1058 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 EVCP57679 992 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 KRT81Q14533 505 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 DIXDC1Q155Q3 683 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 CFAP221Q4G0U5 840 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 TYW1BQ6NUM6 668 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 TTLL11Q8NHH1 800 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 TRIM31Q9BZY9 425 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 AFG3L2Q9Y4W6 797 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 ABCD1P33897 745 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 PDE6CP51160 858 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 CCDC121Q6ZUS5 278 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 HAUS1Q96CS2 278 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 HSPA1LP34931 641 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 BPIFB4P59827 614 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 SLC27A3Q5K4L6 730 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 PODNQ7Z5L7 613 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 AK8Q96MA6 479 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 KCNJ18B7U540 433 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 DTNBO60941 627 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 STAM2O75886 525 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 IFRD2Q12894 506 aaPredicted RBP16.97■□□□□ 0.31
PTPRO-202ENST00000348962 KCNJ12Q14500 433 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 HDXQ7Z353 690 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 SLF1Q9BQI6 1058 aa16.97■□□□□ 0.31
PTPRO-202ENST00000348962 UBXN2AP68543 259 aa16.96■□□□□ 0.31
PTPRO-202ENST00000348962 ERCC6LQ2NKX8 1250 aa16.96■□□□□ 0.31
PTPRO-202ENST00000348962 KIAA1841Q6NSI8 718 aa16.96■□□□□ 0.31
PTPRO-202ENST00000348962 TMED8Q6PL24 325 aaPredicted RBP16.96■□□□□ 0.31
PTPRO-202ENST00000348962 VPS52Q8N1B4 723 aa16.96■□□□□ 0.31
PTPRO-202ENST00000348962 MRRFQ96E11 262 aaKnown RBP16.96■□□□□ 0.31
PTPRO-202ENST00000348962 PTPREP23469 700 aa16.96■□□□□ 0.31
PTPRO-202ENST00000348962 GJA10Q969M2 543 aa16.96■□□□□ 0.31
PTPRO-202ENST00000348962 FOXP1Q9H334 677 aaPredicted RBP16.96■□□□□ 0.31
PTPRO-202ENST00000348962 RAB20Q9NX57 234 aa16.96■□□□□ 0.31
PTPRO-202ENST00000348962 RNF8O76064 485 aa16.96■□□□□ 0.31
PTPRO-202ENST00000348962 SLC16A2P36021 539 aa16.96■□□□□ 0.31
PTPRO-202ENST00000348962 RNASELQ05823 741 aaKnown RBP16.96■□□□□ 0.31
PTPRO-202ENST00000348962 RIPOR2Q9Y4F9 1068 aa16.96■□□□□ 0.31
PTPRO-202ENST00000348962 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTPRO-202ENST00000348962 FMNL1O95466 1100 aaPredicted RBP16.96■□□□□ 0.3
PTPRO-202ENST00000348962 GAP43P17677 238 aa16.96■□□□□ 0.3
PTPRO-202ENST00000348962 MORC3Q14149 939 aa16.96■□□□□ 0.3
PTPRO-202ENST00000348962 DNAJC21Q5F1R6 531 aaKnown RBP16.96■□□□□ 0.3
PTPRO-202ENST00000348962 SAMD9LQ8IVG5 1584 aa16.96■□□□□ 0.3
PTPRO-202ENST00000348962 CEP170P1Q96L14 293 aa16.96■□□□□ 0.3
PTPRO-202ENST00000348962 TLR7Q9NYK1 1049 aaKnown RBP16.96■□□□□ 0.3
PTPRO-202ENST00000348962 PARP2Q9UGN5 583 aa16.96■□□□□ 0.3
PTPRO-202ENST00000348962 RIOK3O14730 519 aaKnown RBP16.95■□□□□ 0.3
PTPRO-202ENST00000348962 PTPN12Q05209 780 aaKnown RBP16.95■□□□□ 0.3
PTPRO-202ENST00000348962 METTL23Q86XA0 190 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 LCORLQ8N3X6 602 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 FAM76AQ8TAV0 307 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 SLC39A2Q9NP94 309 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 ADGRL3Q9HAR2 1447 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 EBAG9O00559 213 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 CYP27B1O15528 508 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 CAPN2P17655 700 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 MTX1Q13505 466 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 Q3C1V9 767 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 TMEM179Q6ZVK1 233 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 RSAD2Q8WXG1 361 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 MKRN1Q9UHC7 482 aaKnown RBP16.95■□□□□ 0.3
PTPRO-202ENST00000348962 KRBA2Q6ZNG9 492 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 TICAM2Q86XR7 235 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 GPIHBP1Q8IV16 184 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 ANTXR1Q9H6X2 564 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 ABCA8O94911 1581 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 TYW5A2RUC4 315 aaKnown RBP16.95■□□□□ 0.3
PTPRO-202ENST00000348962 ABCB4P21439 1286 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 CLCN1P35523 988 aa16.95■□□□□ 0.3
PTPRO-202ENST00000348962 LARP4BQ92615 738 aaKnown RBP16.95■□□□□ 0.3
PTPRO-202ENST00000348962 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.95■□□□□ 0.3
PTPRO-202ENST00000348962 CLASP1Q7Z460 1538 aa16.94■□□□□ 0.3
PTPRO-202ENST00000348962 MECOMQ03112 1051 aa16.94■□□□□ 0.3
PTPRO-202ENST00000348962 PTK2Q05397 1052 aa16.94■□□□□ 0.3
PTPRO-202ENST00000348962 RSRC2Q7L4I2 434 aaKnown RBP16.94■□□□□ 0.3
PTPRO-202ENST00000348962 PIGSQ96S52 555 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms