RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 SEMA3EO15041 775 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 CXCR5P32302 372 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 AMPD3Q01432 767 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 PRPF4BQ13523 1007 aaKnown RBP14.88□□□□□ -0.03
CASC4-202ENST00000345795 ADGRF4Q8IZF3 695 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 CCDC155Q8N6L0 562 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 TRIM10Q9UDY6 481 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 PCDHA6Q9UN73 950 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 PCDHA8Q9Y5H6 950 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 CLIC2O15247 247 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 HARSP12081 509 aaKnown RBP14.88□□□□□ -0.03
CASC4-202ENST00000345795 ALAS1P13196 640 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 KRT31Q15323 416 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 E4F1Q66K89 784 aaPredicted RBP14.88□□□□□ -0.03
CASC4-202ENST00000345795 RCSD1Q6JBY9 416 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 RMND1Q9NWS8 449 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 KRT25Q7Z3Z0 450 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 DGKHQ86XP1 1220 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 DNAAF5Q86Y56 855 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 CCDC42Q96M95 316 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 PDE4DIPQ5VU43 2346 aa14.88□□□□□ -0.03
CASC4-202ENST00000345795 DDTLA6NHG4 134 aaPredicted RBP14.87□□□□□ -0.03
CASC4-202ENST00000345795 RRAGAQ7L523 313 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 SPAG5Q96R06 1193 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 AFDNP55196 1824 aaKnown RBP14.87□□□□□ -0.03
CASC4-202ENST00000345795 POTEB3A0JP26 581 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 POTECB2RU33 542 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
CASC4-202ENST00000345795 CCZ1BP86790 482 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 CCZ1P86791 482 aaPredicted RBP14.87□□□□□ -0.03
CASC4-202ENST00000345795 DNAJC21Q5F1R6 531 aaKnown RBP14.87□□□□□ -0.03
CASC4-202ENST00000345795 SPATA1Q5VX52 437 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 POTEBQ6S5H4 581 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 GPBP1Q86WP2 473 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 CERS5Q8N5B7 392 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 DISC1Q9NRI5 854 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 BUB1O43683 1085 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 TBCAO75347 108 aaKnown RBP14.87□□□□□ -0.03
CASC4-202ENST00000345795 SF3A3Q12874 501 aaKnown RBP eCLIP14.87□□□□□ -0.03
CASC4-202ENST00000345795 GRM1Q13255 1194 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 ZNF408Q9H9D4 720 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 FBXO28Q9NVF7 368 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 MAD2L2Q9UI95 211 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 KCPQ6ZWJ8 1503 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 CNTNAP4Q9C0A0 1308 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 C5P01031 1676 aa14.87□□□□□ -0.03
CASC4-202ENST00000345795 ECE1P42892 770 aa14.86□□□□□ -0.03
CASC4-202ENST00000345795 WDR24Q96S15 920 aa14.86□□□□□ -0.03
CASC4-202ENST00000345795 TSG101Q99816 390 aa14.86□□□□□ -0.03
CASC4-202ENST00000345795 RTFDC1Q9BY42 306 aaPredicted RBP14.86□□□□□ -0.03
CASC4-202ENST00000345795 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.86□□□□□ -0.03
CASC4-202ENST00000345795 POTEFA5A3E0 1075 aa14.86□□□□□ -0.03
CASC4-202ENST00000345795 POTEIP0CG38 1075 aa14.86□□□□□ -0.03
CASC4-202ENST00000345795 STK4Q13043 487 aa14.86□□□□□ -0.03
CASC4-202ENST00000345795 DGKZQ13574 1117 aa14.86□□□□□ -0.03
CASC4-202ENST00000345795 CDC37Q16543 378 aaPredicted RBP14.86□□□□□ -0.03
CASC4-202ENST00000345795 POTEGQ6S5H5 508 aa14.86□□□□□ -0.03
CASC4-202ENST00000345795 POTEEQ6S8J3 1075 aa14.86□□□□□ -0.03
CASC4-202ENST00000345795 ZNF397Q8NF99 534 aaPredicted RBP14.86□□□□□ -0.03
CASC4-202ENST00000345795 ACTN4O43707 911 aaKnown RBP14.86□□□□□ -0.03
CASC4-202ENST00000345795 SRGAP2O75044 1071 aa14.86□□□□□ -0.03
CASC4-202ENST00000345795 VSTM4Q8IW00 320 aa14.86□□□□□ -0.03
CASC4-202ENST00000345795 ST7Q9NRC1 585 aa14.86□□□□□ -0.03
CASC4-202ENST00000345795 SLC37A4O43826 429 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 TM4SF1P30408 202 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 COPB1P53618 953 aaKnown RBP14.85□□□□□ -0.03
CASC4-202ENST00000345795 CTTNQ14247 550 aaKnown RBP14.85□□□□□ -0.03
CASC4-202ENST00000345795 NCAPHQ15003 741 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 CHP1Q99653 195 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 ZMYND15Q9H091 742 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 GCNT3O95395 438 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 FXR1P51114 621 aaKnown RBP eCLIP14.85□□□□□ -0.03
CASC4-202ENST00000345795 QRICH1Q2TAL8 776 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 FAM83BQ5T0W9 1011 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 KRT26Q7Z3Y9 468 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 SHISA4Q96DD7 197 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 TMEM39BQ9GZU3 492 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 CDR1P51861 262 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 KSR1Q8IVT5 923 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 PRMT6Q96LA8 375 aaPredicted RBP14.85□□□□□ -0.03
CASC4-202ENST00000345795 CNOT6LQ96LI5 555 aaKnown RBP14.85□□□□□ -0.03
CASC4-202ENST00000345795 TUBGCP2Q9BSJ2 902 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 BARHL2Q9NY43 387 aa14.85□□□□□ -0.03
CASC4-202ENST00000345795 F5H6K3 240 aa14.84□□□□□ -0.03
CASC4-202ENST00000345795 ARHGAP6O43182 974 aa14.84□□□□□ -0.03
CASC4-202ENST00000345795 CCP110O43303 1012 aa14.84□□□□□ -0.03
CASC4-202ENST00000345795 GTPBP6O43824 516 aaPredicted RBP14.84□□□□□ -0.03
CASC4-202ENST00000345795 PDHBP11177 359 aa14.84□□□□□ -0.03
CASC4-202ENST00000345795 NPR1P16066 1061 aa14.84□□□□□ -0.03
CASC4-202ENST00000345795 CYP2J2P51589 502 aa14.84□□□□□ -0.03
CASC4-202ENST00000345795 ETF1P62495 437 aaKnown RBP14.84□□□□□ -0.03
CASC4-202ENST00000345795 PPP2R3AQ06190 1150 aa14.84□□□□□ -0.03
CASC4-202ENST00000345795 KLRC3Q07444 240 aa14.84□□□□□ -0.03
CASC4-202ENST00000345795 CT47A1Q5JQC4 288 aaPredicted RBP14.84□□□□□ -0.03
CASC4-202ENST00000345795 EEPD1Q7L9B9 569 aa14.84□□□□□ -0.03
CASC4-202ENST00000345795 MTMR4Q9NYA4 1195 aa14.84□□□□□ -0.03
CASC4-202ENST00000345795 ADAMTSL3P82987 1691 aa14.84□□□□□ -0.03
CASC4-202ENST00000345795 DPYDQ12882 1025 aa14.84□□□□□ -0.03
CASC4-202ENST00000345795 PPP2R5BQ15173 497 aa14.84□□□□□ -0.03
CASC4-202ENST00000345795 GLIS3Q8NEA6 775 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms