RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 CUL1Q13616 776 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 AFAP1L2Q8N4X5 818 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 NLRP7Q8WX94 980 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 HAUS2Q9NVX0 235 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 CCDC93Q567U6 631 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 WDR78Q5VTH9 848 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 DHX40Q8IX18 779 aaKnown RBP13.23□□□□□ -0.29
COL12A1-202ENST00000345356 ZNF654Q8IZM8 581 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 PCDHB13Q9Y5F0 798 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 SCINQ9Y6U3 715 aa13.23□□□□□ -0.29
COL12A1-202ENST00000345356 GCNT3O95395 438 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 CHGBP05060 677 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 CYP2E1P05181 493 aaPredicted RBP13.22□□□□□ -0.29
COL12A1-202ENST00000345356 ZAP70P43403 619 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 ZBED6P86452 979 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 CCZ1BP86790 482 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 CCZ1P86791 482 aaPredicted RBP13.22□□□□□ -0.29
COL12A1-202ENST00000345356 E4F1Q66K89 784 aaPredicted RBP13.22□□□□□ -0.29
COL12A1-202ENST00000345356 OTUD6AQ7L8S5 288 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 ZBTB21Q9ULJ3 1066 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 EXOC3O60645 756 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 EIF4A3P38919 411 aaKnown RBP13.22□□□□□ -0.29
COL12A1-202ENST00000345356 MRPL12P52815 198 aaKnown RBP13.22□□□□□ -0.29
COL12A1-202ENST00000345356 HDLBPQ00341 1268 aaKnown RBP13.22□□□□□ -0.29
COL12A1-202ENST00000345356 ZMYND12Q9H0C1 365 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 CYP21A2P08686 494 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 PTGDRQ13258 359 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 TMED2Q15363 201 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 GLE1Q53GS7 698 aaKnown RBP13.22□□□□□ -0.29
COL12A1-202ENST00000345356 TMTC3Q6ZXV5 915 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 NME8Q8N427 588 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 KIFC2Q96AC6 838 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 TUBB6Q9BUF5 446 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 BABAM1Q9NWV8 329 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 TBK1Q9UHD2 729 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 CRCPO75575 148 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 GUCY1A3Q02108 690 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 NFATC2IPQ8NCF5 419 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 CYTH2Q99418 400 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 GOLPH3LQ9H4A5 285 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 STOML1Q9UBI4 398 aa13.22□□□□□ -0.29
COL12A1-202ENST00000345356 MAPK13O15264 365 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 TRAF1Q13077 416 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 CASC4Q6P4E1 433 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 DCUN1D2Q6PH85 259 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 BPIFA3Q9BQP9 254 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 AP1M1Q9BXS5 423 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 MRPL44Q9H9J2 332 aaKnown RBP13.21□□□□□ -0.29
COL12A1-202ENST00000345356 ABCC1P33527 1531 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 HOXB7P09629 217 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 BBOF1Q8ND07 529 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 PBKQ96KB5 322 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 FNBP1Q96RU3 617 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 KIF2CQ99661 725 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 CFAP73A6NFT4 308 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 PDE6CP51160 858 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 MAGOHP61326 146 aaKnown RBP13.21□□□□□ -0.29
COL12A1-202ENST00000345356 DRP2Q13474 957 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 PICALMQ13492 652 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 C6orf118Q5T5N4 469 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 CCT6BQ92526 530 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 ANLNQ9NQW6 1124 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 ARMCX3Q9UH62 379 aaPredicted RBP13.21□□□□□ -0.29
COL12A1-202ENST00000345356 ZNF532Q9HCE3 1301 aa13.21□□□□□ -0.29
COL12A1-202ENST00000345356 C6orf229H3BNL8 230 aa13.21□□□□□ -0.3
COL12A1-202ENST00000345356 RWDD2AQ9UIY3 292 aa13.21□□□□□ -0.3
COL12A1-202ENST00000345356 EIF3HO15372 352 aaKnown RBP eCLIP13.21□□□□□ -0.3
COL12A1-202ENST00000345356 PPP2R2AP63151 447 aa13.21□□□□□ -0.3
COL12A1-202ENST00000345356 ZNF589Q86UQ0 364 aaPredicted RBP13.21□□□□□ -0.3
COL12A1-202ENST00000345356 ADGRG1Q9Y653 693 aa13.21□□□□□ -0.3
COL12A1-202ENST00000345356 ADGRL1O94910 1474 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 HNRNPCP07910 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
COL12A1-202ENST00000345356 IL17RAQ96F46 866 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 UIMC1Q96RL1 719 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.2□□□□□ -0.3
COL12A1-202ENST00000345356 KDM5BQ9UGL1 1544 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 BIVM-ERCC5R4GMW8 1640 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 IRS4O14654 1257 aaPredicted RBP13.2□□□□□ -0.3
COL12A1-202ENST00000345356 ESRRAP11474 423 aaPredicted RBP13.2□□□□□ -0.3
COL12A1-202ENST00000345356 MAN1A1P33908 653 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 KIF11P52732 1056 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 KRT31Q15323 416 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 CHMP2AO43633 222 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 RAD23BP54727 409 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 ADCY2Q08462 1091 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 NXNQ6DKJ4 435 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 LRRC59Q96AG4 307 aaKnown RBP13.2□□□□□ -0.3
COL12A1-202ENST00000345356 ATP6V1G3Q96LB4 118 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 ECT2Q9H8V3 914 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 HDAC6Q9UBN7 1215 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 SLC4A7Q9Y6M7 1214 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 MAGI2Q86UL8 1455 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 ANKRD20A4Q4UJ75 823 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 ANKRD20A8PQ5CZ79 823 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 ANKRD20A2Q5SQ80 823 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 ZNF658Q5TYW1 1059 aaPredicted RBP13.2□□□□□ -0.3
COL12A1-202ENST00000345356 ANKRD20A1Q5TYW2 823 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 ZNF354CQ86Y25 554 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 PFDN4Q9NQP4 134 aa13.2□□□□□ -0.3
COL12A1-202ENST00000345356 DNM3Q9UQ16 869 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms