RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CELF1Q92879 486 aaKnown RBP7.95□□□□□ -1.14
VCAN-202ENST00000342785 STMN4Q9H169 189 aaPredicted RBP7.95□□□□□ -1.14
VCAN-202ENST00000342785 PODXL2Q9NZ53 605 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 A6NNZ2 444 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 KIF4AO95239 1232 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 MYL1P05976 194 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 PNMA6AP0CW24 399 aaPredicted RBP7.95□□□□□ -1.14
VCAN-202ENST00000342785 TUBB8Q3ZCM7 444 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 SEL1L2Q5TEA6 688 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 ARMCX5Q6P1M9 558 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 NSMFQ6X4W1 530 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 FAM196AQ6ZSG2 479 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 DPF2Q92785 391 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 CCDC114Q96M63 670 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 NSRP1Q9H0G5 558 aaKnown RBP7.95□□□□□ -1.14
VCAN-202ENST00000342785 SYNCQ9H7C4 482 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 DDX25Q9UHL0 483 aaKnown RBP7.95□□□□□ -1.14
VCAN-202ENST00000342785 DDX39AO00148 427 aaKnown RBP7.94□□□□□ -1.14
VCAN-202ENST00000342785 GUCY1A2P33402 732 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 DMTNQ08495 405 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 ARHGAP44Q17R89 818 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 U2AF1L4Q8WU68 220 aaKnown RBP7.94□□□□□ -1.14
VCAN-202ENST00000342785 DCP1AQ9NPI6 582 aaPredicted RBP7.94□□□□□ -1.14
VCAN-202ENST00000342785 PANK4Q9NVE7 773 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 USP21Q9UK80 565 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 MINPP1Q9UNW1 487 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 TEX33O43247 280 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 PLCG1P19174 1290 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 PTPROQ16827 1216 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 DOK7Q18PE1 504 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 GPATCH4Q5T3I0 446 aaKnown RBP7.94□□□□□ -1.14
VCAN-202ENST00000342785 RUFY4Q6ZNE9 571 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 GSTA5Q7RTV2 222 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 METTL16Q86W50 562 aaKnown RBP7.94□□□□□ -1.14
VCAN-202ENST00000342785 COA7Q96BR5 231 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 PAIP2Q9BPZ3 127 aaKnown RBP7.94□□□□□ -1.14
VCAN-202ENST00000342785 SERPINB13Q9UIV8 391 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 CSF1RP07333 972 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 MED4Q9NPJ6 270 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.94□□□□□ -1.14
VCAN-202ENST00000342785 DISC1Q9NRI5 854 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 IKBKGQ9Y6K9 419 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 PXDNLA1KZ92 1463 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 FAM170AA1A519 330 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 KCNK3O14649 394 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 ATP2A1O14983 1001 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 ZMYND10O75800 440 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 SMTNP53814 917 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 ICA1Q05084 483 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 TTLL12Q14166 644 aaPredicted RBP7.94□□□□□ -1.14
VCAN-202ENST00000342785 ENGASEQ8NFI3 743 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 GJA10Q969M2 543 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 CPVLQ9H3G5 476 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 MKRN1Q9UHC7 482 aaKnown RBP7.94□□□□□ -1.14
VCAN-202ENST00000342785 STK24Q9Y6E0 443 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 NMT2O60551 498 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 GAS7O60861 476 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 ABCB4P21439 1286 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 GUCY2FP51841 1108 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 EHHADHQ08426 723 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 CUL4BQ13620 913 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 MAN2A1Q16706 1144 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 SMCR8Q8TEV9 937 aaPredicted RBP7.94□□□□□ -1.14
VCAN-202ENST00000342785 DDX12PQ92771 950 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 PLA2G12BQ9BX93 195 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 KRT71Q3SY84 523 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 TTC31Q49AM3 519 aaPredicted RBP7.94□□□□□ -1.14
VCAN-202ENST00000342785 KMT5BQ4FZB7 885 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 CCDC17Q96LX7 622 aa7.94□□□□□ -1.14
VCAN-202ENST00000342785 PRR29P0C7W0 189 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 RASSF7Q02833 373 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 PABPC4Q13310 644 aaKnown RBP eCLIP7.93□□□□□ -1.14
VCAN-202ENST00000342785 CERKLQ49MI3 558 aaPredicted RBP7.93□□□□□ -1.14
VCAN-202ENST00000342785 TOGARAM2Q6ZUX3 1019 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 B4GALNT4Q76KP1 1039 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 ANKS4BQ8N8V4 417 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 IGDCC4Q8TDY8 1250 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 STK17AQ9UEE5 414 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 SLC16A2P36021 539 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 E4F1Q66K89 784 aaPredicted RBP7.93□□□□□ -1.14
VCAN-202ENST00000342785 USP49Q70CQ1 688 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 FBXO11Q86XK2 927 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 FNBP1Q96RU3 617 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 COL4A3BPQ9Y5P4 624 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 CYP2J2P51589 502 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 CCZ1BP86790 482 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 CCZ1P86791 482 aaPredicted RBP7.93□□□□□ -1.14
VCAN-202ENST00000342785 ASPRV1Q53RT3 343 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 AMNQ9BXJ7 453 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 METTL14Q9HCE5 456 aaKnown RBP7.93□□□□□ -1.14
VCAN-202ENST00000342785 KCNK9Q9NPC2 374 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 PIK3C2BO00750 1634 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 CACNB1Q02641 598 aaPredicted RBP7.93□□□□□ -1.14
VCAN-202ENST00000342785 PFKFB3Q16875 520 aaPredicted RBP7.93□□□□□ -1.14
VCAN-202ENST00000342785 TCP11X2Q5H9J9 407 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 GBP6Q6ZN66 633 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 SYCE1Q8N0S2 351 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 SLC44A5Q8NCS7 719 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 FAM212AQ96EL1 285 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 RIC8AQ9NPQ8 531 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms