RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 CRBNQ96SW2 442 aa11.92□□□□□ -0.5
SNRPD2-201ENST00000342669 KATNBL1Q9H079 304 aa11.92□□□□□ -0.5
SNRPD2-201ENST00000342669 TOMM22Q9NS69 142 aa11.92□□□□□ -0.5
SNRPD2-201ENST00000342669 TBX21Q9UL17 535 aa11.92□□□□□ -0.5
SNRPD2-201ENST00000342669 CCPG1Q9ULG6 757 aa11.92□□□□□ -0.5
SNRPD2-201ENST00000342669 PRR12Q9ULL5 1215 aa11.92□□□□□ -0.5
SNRPD2-201ENST00000342669 MYO9BQ13459 2157 aa11.92□□□□□ -0.5
SNRPD2-201ENST00000342669 TMEM265A0A087WTH1 108 aa11.91□□□□□ -0.5
SNRPD2-201ENST00000342669 PDE1AP54750 535 aa11.91□□□□□ -0.5
SNRPD2-201ENST00000342669 NKX3-2P78367 333 aa11.91□□□□□ -0.5
SNRPD2-201ENST00000342669 PPIGQ13427 754 aaKnown RBP eCLIP11.91□□□□□ -0.5
SNRPD2-201ENST00000342669 MCMDC2Q4G0Z9 681 aa11.91□□□□□ -0.5
SNRPD2-201ENST00000342669 MUM1L1Q5H9M0 696 aa11.91□□□□□ -0.5
SNRPD2-201ENST00000342669 RRP12Q5JTH9 1297 aaKnown RBP11.91□□□□□ -0.5
SNRPD2-201ENST00000342669 MFSD5Q6N075 450 aa11.91□□□□□ -0.5
SNRPD2-201ENST00000342669 TICAM2Q86XR7 235 aa11.91□□□□□ -0.5
SNRPD2-201ENST00000342669 AP5M1Q9H0R1 490 aa11.91□□□□□ -0.5
SNRPD2-201ENST00000342669 LCTP09848 1927 aa11.91□□□□□ -0.5
SNRPD2-201ENST00000342669 LRRC37A2A6NM11 1700 aa11.91□□□□□ -0.5
SNRPD2-201ENST00000342669 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 CTAGE5O15320 804 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 ZEB2O60315 1214 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 CABYRO75952 493 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 FGAP02671 866 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 ICAM1P05362 532 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 FGRP09769 529 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 TOP1P11387 765 aaKnown RBP11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 NOVP48745 357 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 BEX3Q00994 111 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 HDAC1Q13547 482 aaPredicted RBP11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 FSCN1Q16658 493 aaKnown RBP11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 IQSEC1Q6DN90 963 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 NSMFQ6X4W1 530 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 RASGRP2Q7LDG7 609 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 TLK2Q86UE8 772 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 TMEM199Q8N511 208 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 MAFAQ8NHW3 353 aaPredicted RBP11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 MYLIPQ8WY64 445 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 FAM227BQ96M60 508 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 TTYH1Q9H313 450 aaPredicted RBP11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 CYP39A1Q9NYL5 469 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 GNEQ9Y223 722 aaKnown RBP11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 CUL9Q8IWT3 2517 aa11.9□□□□□ -0.5
SNRPD2-201ENST00000342669 A0A0D9SFI3 127 aa11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 TRIM6-TRIM34B2RNG4 842 aa11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 DYNC1LI2O43237 492 aaPredicted RBP11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 SLC16A2P36021 539 aa11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 SYDE2Q5VT97 1194 aa11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 TTBK2Q6IQ55 1244 aa11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 CXCL17Q6UXB2 119 aa11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 BTNL9Q6UXG8 535 aa11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 EEPD1Q7L9B9 569 aa11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 FAM126BQ8IXS8 530 aa11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 PPP1R12CQ9BZL4 782 aa11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 RANBP17Q9H2T7 1088 aaKnown RBP11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 VTA1Q9NP79 307 aa11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 TCP11L1Q9NUJ3 509 aa11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 ADD3Q9UEY8 706 aaKnown RBP11.89□□□□□ -0.51
SNRPD2-201ENST00000342669 VCANP13611 3396 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 ASTN1O14525 1302 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 HSPD1P10809 573 aaKnown RBP11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 PCP11498 1178 aaKnown RBP11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 FOSL2P15408 326 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 SMPD1P17405 629 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 DNAJB2P25686 324 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 NMIQ13287 307 aaPredicted RBP11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 ITGA7Q13683 1181 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 BAATQ14032 418 aaPredicted RBP11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 TMEM240Q5SV17 173 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 TAPT1Q6NXT6 567 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 KIAA1211Q6ZU35 1233 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 FBXO16Q8IX29 292 aaPredicted RBP11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 TMEM47Q9BQJ4 181 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 SEZ6LQ9BYH1 1024 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 GPCPD1Q9NPB8 672 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 PDGFCQ9NRA1 345 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 PNMA2Q9UL42 364 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 Q9Y3F1 56 aa11.88□□□□□ -0.51
SNRPD2-201ENST00000342669 ZMYM6O95789 1325 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 FRMPD2Q68DX3 1309 aaPredicted RBP11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 PTPDC1A2A3K4 754 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 CD4P01730 458 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 ACRP10323 421 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 CSF2RAP15509 400 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 MFAP1P55081 439 aaKnown RBP11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 HAND2P61296 217 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 AKNAD1Q5T1N1 836 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 PSRC1Q6PGN9 363 aaPredicted RBP11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 MFSD6Q6ZSS7 791 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 ZNF589Q86UQ0 364 aaPredicted RBP11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 SLC43A3Q8NBI5 491 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 MORC4Q8TE76 937 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 RILPL2Q969X0 211 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 TIFAQ96CG3 184 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 TTC14Q96N46 770 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 PURBQ96QR8 312 aaKnown RBP11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 COL25A1Q9BXS0 654 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms