RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 CNOT6LQ96LI5 555 aaKnown RBP16.3■□□□□ 0.2
RET-201ENST00000340058 SELENOOQ9BVL4 669 aa16.3■□□□□ 0.2
RET-201ENST00000340058 CCPG1Q9ULG6 757 aa16.3■□□□□ 0.2
RET-201ENST00000340058 MROH1Q8NDA8 1641 aa16.3■□□□□ 0.2
RET-201ENST00000340058 SFI1A8K8P3 1242 aa16.3■□□□□ 0.2
RET-201ENST00000340058 CYP27A1Q02318 531 aa16.3■□□□□ 0.2
RET-201ENST00000340058 ACRBPQ8NEB7 543 aa16.3■□□□□ 0.2
RET-201ENST00000340058 SECISBP2LQ93073 1101 aaKnown RBP16.3■□□□□ 0.2
RET-201ENST00000340058 SALL3Q9BXA9 1300 aa16.3■□□□□ 0.2
RET-201ENST00000340058 CEP104O60308 925 aa16.3■□□□□ 0.2
RET-201ENST00000340058 ZBED4O75132 1171 aa16.3■□□□□ 0.2
RET-201ENST00000340058 ZBTB7AO95365 584 aa16.3■□□□□ 0.2
RET-201ENST00000340058 AOC3Q16853 763 aa16.3■□□□□ 0.2
RET-201ENST00000340058 TXNRD3Q86VQ6 643 aa16.3■□□□□ 0.2
RET-201ENST00000340058 DGKHQ86XP1 1220 aa16.3■□□□□ 0.2
RET-201ENST00000340058 IGDCC4Q8TDY8 1250 aa16.3■□□□□ 0.2
RET-201ENST00000340058 LARP4BQ92615 738 aaKnown RBP16.3■□□□□ 0.2
RET-201ENST00000340058 SOWAHDA6NJG2 315 aa16.3■□□□□ 0.2
RET-201ENST00000340058 H7C1D1 291 aa16.3■□□□□ 0.2
RET-201ENST00000340058 CLIC2O15247 247 aa16.3■□□□□ 0.2
RET-201ENST00000340058 ADAM9Q13443 819 aa16.3■□□□□ 0.2
RET-201ENST00000340058 EAPPQ56P03 285 aaPredicted RBP16.3■□□□□ 0.2
RET-201ENST00000340058 MIER3Q7Z3K6 550 aa16.3■□□□□ 0.2
RET-201ENST00000340058 SRBD1Q8N5C6 995 aaKnown RBP16.3■□□□□ 0.2
RET-201ENST00000340058 FLAD1Q8NFF5 587 aa16.3■□□□□ 0.2
RET-201ENST00000340058 VTI1AQ96AJ9 217 aa16.3■□□□□ 0.2
RET-201ENST00000340058 GLT8D2Q9H1C3 349 aa16.3■□□□□ 0.2
RET-201ENST00000340058 KANSL2Q9H9L4 492 aa16.3■□□□□ 0.2
RET-201ENST00000340058 HSF2BPO75031 334 aa16.29■□□□□ 0.2
RET-201ENST00000340058 CAPN2P17655 700 aa16.29■□□□□ 0.2
RET-201ENST00000340058 ADAT2Q7Z6V5 191 aaKnown RBP16.29■□□□□ 0.2
RET-201ENST00000340058 TRIML1Q8N9V2 468 aa16.29■□□□□ 0.2
RET-201ENST00000340058 UTYO14607 1347 aa16.29■□□□□ 0.2
RET-201ENST00000340058 SHTN1A0MZ66 631 aa16.29■□□□□ 0.2
RET-201ENST00000340058 GCOM1H8Y6P7 765 aaPredicted RBP16.29■□□□□ 0.2
RET-201ENST00000340058 POLR2MP0CAP2 368 aa16.29■□□□□ 0.2
RET-201ENST00000340058 GPATCH4Q5T3I0 446 aaKnown RBP16.29■□□□□ 0.2
RET-201ENST00000340058 USP37Q86T82 979 aa16.29■□□□□ 0.2
RET-201ENST00000340058 CCDC84Q86UT8 332 aaPredicted RBP16.29■□□□□ 0.2
RET-201ENST00000340058 CCDC17Q96LX7 622 aa16.29■□□□□ 0.2
RET-201ENST00000340058 NAP1L4Q99733 375 aaKnown RBP16.29■□□□□ 0.2
RET-201ENST00000340058 NT5C3AQ9H0P0 336 aa16.29■□□□□ 0.2
RET-201ENST00000340058 ARMCX3Q9UH62 379 aaPredicted RBP16.29■□□□□ 0.2
RET-201ENST00000340058 GOLGA6L10A0A0M3HER8 536 aa16.29■□□□□ 0.2
RET-201ENST00000340058 PRR5LQ6MZQ0 368 aa16.29■□□□□ 0.2
RET-201ENST00000340058 PPP1R13BQ96KQ4 1090 aa16.29■□□□□ 0.2
RET-201ENST00000340058 KIAA1210Q9ULL0 1709 aa16.28■□□□□ 0.2
RET-201ENST00000340058 KDM6AO15550 1401 aaPredicted RBP16.28■□□□□ 0.2
RET-201ENST00000340058 USP17L10C9JJH3 530 aa16.28■□□□□ 0.2
RET-201ENST00000340058 ASPRV1Q53RT3 343 aa16.28■□□□□ 0.2
RET-201ENST00000340058 INTS5Q6P9B9 1019 aaKnown RBP16.28■□□□□ 0.2
RET-201ENST00000340058 ATRIPQ8WXE1 791 aa16.28■□□□□ 0.2
RET-201ENST00000340058 RSPH14Q9UHP6 348 aa16.28■□□□□ 0.2
RET-201ENST00000340058 ATP6V0A2Q9Y487 856 aa16.28■□□□□ 0.2
RET-201ENST00000340058 EPN1Q9Y6I3 576 aaPredicted RBP16.28■□□□□ 0.2
RET-201ENST00000340058 SPOPO43791 374 aa16.28■□□□□ 0.2
RET-201ENST00000340058 NEBLO76041 1014 aa16.28■□□□□ 0.2
RET-201ENST00000340058 BMP3P12645 472 aa16.28■□□□□ 0.2
RET-201ENST00000340058 GRIN1Q05586 938 aa16.28■□□□□ 0.2
RET-201ENST00000340058 TRIM14Q14142 442 aa16.28■□□□□ 0.2
RET-201ENST00000340058 CLEC17AQ6ZS10 378 aa16.28■□□□□ 0.2
RET-201ENST00000340058 FAM178BQ8IXR5 827 aa16.28■□□□□ 0.2
RET-201ENST00000340058 PLA2G12BQ9BX93 195 aa16.28■□□□□ 0.2
RET-201ENST00000340058 MYO1AQ9UBC5 1043 aa16.28■□□□□ 0.2
RET-201ENST00000340058 AKR1B1P15121 316 aa16.28■□□□□ 0.2
RET-201ENST00000340058 DNM2P50570 870 aa16.28■□□□□ 0.2
RET-201ENST00000340058 NLRX1Q86UT6 975 aa16.28■□□□□ 0.2
RET-201ENST00000340058 PI4KBQ9UBF8 816 aa16.28■□□□□ 0.2
RET-201ENST00000340058 ZMYND10O75800 440 aa16.27■□□□□ 0.2
RET-201ENST00000340058 NPR1P16066 1061 aa16.27■□□□□ 0.2
RET-201ENST00000340058 HSPA1LP34931 641 aa16.27■□□□□ 0.2
RET-201ENST00000340058 CRKP46108 304 aa16.27■□□□□ 0.2
RET-201ENST00000340058 SMTNP53814 917 aa16.27■□□□□ 0.2
RET-201ENST00000340058 FAM102BQ5T8I3 360 aa16.27■□□□□ 0.2
RET-201ENST00000340058 SFMBT2Q5VUG0 894 aa16.27■□□□□ 0.2
RET-201ENST00000340058 TTBK2Q6IQ55 1244 aa16.27■□□□□ 0.2
RET-201ENST00000340058 EEPD1Q7L9B9 569 aa16.27■□□□□ 0.2
RET-201ENST00000340058 TIGD1Q96MW7 591 aa16.27■□□□□ 0.2
RET-201ENST00000340058 COA1Q9GZY4 146 aa16.27■□□□□ 0.2
RET-201ENST00000340058 SPATA31D1Q6ZQQ2 1576 aa16.27■□□□□ 0.2
RET-201ENST00000340058 NOP56O00567 594 aaKnown RBP16.27■□□□□ 0.2
RET-201ENST00000340058 XRCC5P13010 732 aaKnown RBP16.27■□□□□ 0.2
RET-201ENST00000340058 VAV2P52735 878 aa16.27■□□□□ 0.2
RET-201ENST00000340058 XKR9Q5GH70 373 aa16.27■□□□□ 0.2
RET-201ENST00000340058 C3orf67Q6ZVT6 689 aa16.27■□□□□ 0.2
RET-201ENST00000340058 HOOK3Q86VS8 718 aa16.27■□□□□ 0.2
RET-201ENST00000340058 TRAPPC10P48553 1259 aa16.27■□□□□ 0.19
RET-201ENST00000340058 ALX1Q15699 326 aa16.27■□□□□ 0.19
RET-201ENST00000340058 RESP18Q5W5W9 173 aa16.27■□□□□ 0.19
RET-201ENST00000340058 HPS3Q969F9 1004 aa16.27■□□□□ 0.19
RET-201ENST00000340058 DESP17661 470 aa16.26■□□□□ 0.19
RET-201ENST00000340058 PPP1R2P41236 205 aa16.26■□□□□ 0.19
RET-201ENST00000340058 MRPS25P82663 173 aaKnown RBP16.26■□□□□ 0.19
RET-201ENST00000340058 SMC1AQ14683 1233 aaKnown RBP16.26■□□□□ 0.19
RET-201ENST00000340058 CDC37Q16543 378 aaPredicted RBP16.26■□□□□ 0.19
RET-201ENST00000340058 LRCH2Q5VUJ6 765 aa16.26■□□□□ 0.19
RET-201ENST00000340058 SGMS1Q86VZ5 419 aa16.26■□□□□ 0.19
RET-201ENST00000340058 U2AF1L4Q8WU68 220 aaKnown RBP16.26■□□□□ 0.19
RET-201ENST00000340058 GLG1Q92896 1179 aa16.26■□□□□ 0.19
RET-201ENST00000340058 SUGCTQ9HAC7 445 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms