RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 MMS19Q96T76 1030 aa13.96□□□□□ -0.17
USP47-202ENST00000339865 TRIM15Q9C019 465 aa13.96□□□□□ -0.17
USP47-202ENST00000339865 LMCD1Q9NZU5 365 aa13.96□□□□□ -0.17
USP47-202ENST00000339865 ATP8A1Q9Y2Q0 1164 aa13.96□□□□□ -0.17
USP47-202ENST00000339865 TOM1O60784 492 aa13.96□□□□□ -0.18
USP47-202ENST00000339865 ANXA1P04083 346 aa13.96□□□□□ -0.18
USP47-202ENST00000339865 KRT33BQ14525 404 aa13.96□□□□□ -0.18
USP47-202ENST00000339865 STAMQ92783 540 aa13.96□□□□□ -0.18
USP47-202ENST00000339865 XPO4Q9C0E2 1151 aaKnown RBP13.96□□□□□ -0.18
USP47-202ENST00000339865 KIF21BO75037 1637 aa13.96□□□□□ -0.18
USP47-202ENST00000339865 ZSCAN9O15535 394 aaPredicted RBP13.96□□□□□ -0.18
USP47-202ENST00000339865 SPAG7O75391 227 aa13.96□□□□□ -0.18
USP47-202ENST00000339865 SESTD1Q86VW0 696 aa13.96□□□□□ -0.18
USP47-202ENST00000339865 NAF1Q96HR8 494 aaKnown RBP13.96□□□□□ -0.18
USP47-202ENST00000339865 PLEKHM3Q6ZWE6 761 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 NLRP9Q7RTR0 991 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 SAP30BPQ9UHR5 308 aaKnown RBP13.95□□□□□ -0.18
USP47-202ENST00000339865 NAIPQ13075 1403 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 EFCAB14O75071 495 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 C1orf228Q6PIY5 440 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 OTULINQ96BN8 352 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 MEIS3Q99687 375 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 SYTL2Q9HCH5 934 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 FGFR1OP2Q9NVK5 253 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 PNMA2Q9UL42 364 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 INPP5FQ9Y2H2 1132 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 KCNA1Q09470 495 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 C6orf118Q5T5N4 469 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 CYP4F22Q6NT55 531 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 ZFYVE19Q96K21 471 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 FAM193BQ96PV7 902 aaPredicted RBP13.95□□□□□ -0.18
USP47-202ENST00000339865 DIABLOQ9NR28 239 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 ZNF215Q9UL58 517 aaPredicted RBP13.95□□□□□ -0.18
USP47-202ENST00000339865 SLFN14P0C7P3 912 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 TSPY1Q01534 308 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 ANKRD13DQ6ZTN6 518 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 RUNDC3BQ96NL0 473 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 CYP2J2P51589 502 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 ARHGEF18Q6ZSZ5 1173 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 ARMC2Q8NEN0 867 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 NCLNQ969V3 563 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 MAPK13O15264 365 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 EIF6P56537 245 aaKnown RBP13.95□□□□□ -0.18
USP47-202ENST00000339865 ZNF804AQ7Z570 1209 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 TAGAPQ8N103 731 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 MAGOHBQ96A72 148 aaKnown RBP13.95□□□□□ -0.18
USP47-202ENST00000339865 SETDB2Q96T68 719 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 BLZF1Q9H2G9 400 aa13.95□□□□□ -0.18
USP47-202ENST00000339865 OR8K1Q8NGG5 319 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 SH3GL2Q99962 352 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 STMN3Q9NZ72 180 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 CEP78Q5JTW2 689 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 NOP53Q9NZM5 478 aaKnown RBP13.94□□□□□ -0.18
USP47-202ENST00000339865 GRM8O00222 908 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 USH1GQ495M9 461 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 SNX29Q8TEQ0 813 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 BTN2A2Q8WVV5 523 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 HDAC4P56524 1084 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 ZBED2Q9BTP6 218 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 TUBB6Q9BUF5 446 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 GYG2O15488 501 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 METTL13Q8N6R0 699 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 TEX12Q9BXU0 123 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 A0A087WUV0 522 aaPredicted RBP13.94□□□□□ -0.18
USP47-202ENST00000339865 PDZD4Q76G19 769 aaPredicted RBP13.94□□□□□ -0.18
USP47-202ENST00000339865 B4GALNT2Q8NHY0 566 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 PHKBQ93100 1093 aa13.94□□□□□ -0.18
USP47-202ENST00000339865 CUTAO60888 179 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 RWDD2BP57060 319 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 DNAAF3Q8N9W5 541 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 MOSPD1Q9UJG1 213 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 NBPF26B4DH59 902 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 PNOCQ13519 176 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 ZYXQ15942 572 aaKnown RBP13.93□□□□□ -0.18
USP47-202ENST00000339865 NBPF15Q8N660 670 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 GIPC2Q8TF65 315 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 CHCHD3Q9NX63 227 aaKnown RBP13.93□□□□□ -0.18
USP47-202ENST00000339865 A0A1B0GW55 424 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 GNA14O95837 355 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 CPP00450 1065 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 DUX4L2P0CJ85 424 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 DUX4L3P0CJ86 424 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 DUX4L4P0CJ87 422 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 DUX4L5P0CJ88 424 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 DUX4L6P0CJ89 424 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 DUX4L7P0CJ90 424 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 HDLBPQ00341 1268 aaKnown RBP13.93□□□□□ -0.18
USP47-202ENST00000339865 PCGF5Q86SE9 256 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 CSRNP1Q96S65 589 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 DUX4Q9UBX2 424 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 A6NJR5 290 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 TMEM232C9JQI7 657 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 KRT17Q04695 432 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 SMC5Q8IY18 1101 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 WIZO95785 1651 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 CPA1P15085 419 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 DYNC1I2Q13409 638 aaKnown RBP13.93□□□□□ -0.18
USP47-202ENST00000339865 ANGPT1Q15389 498 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 DEPDC1Q5TB30 811 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 RYBPQ8N488 228 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms