RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 SECISBP2LQ93073 1101 aaKnown RBP6.99□□□□□ -1.29
PRKDC-202ENST00000338368 RIC8AQ9NPQ8 531 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 RWDD2AQ9UIY3 292 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 EPB41P11171 864 aaKnown RBP6.99□□□□□ -1.29
PRKDC-202ENST00000338368 RICTORQ6R327 1708 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 FOXN1O15353 648 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 LRRC41Q15345 812 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 DHTKD1Q96HY7 919 aaPredicted RBP6.99□□□□□ -1.29
PRKDC-202ENST00000338368 CAPZA3Q96KX2 299 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 HAUS4Q9H6D7 363 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 EPN1Q9Y6I3 576 aaPredicted RBP6.99□□□□□ -1.29
PRKDC-202ENST00000338368 USP17L5A8MUK1 530 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 GDF11O95390 407 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 CASP1P29466 404 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 CYP4A11Q02928 519 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 PPP1R13BQ96KQ4 1090 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 TUBGCP2Q9BSJ2 902 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 GOPCQ9HD26 462 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 SPTLC3Q9NUV7 552 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 ANAPC4Q9UJX5 808 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 CNTNAP4Q9C0A0 1308 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 H0YHG0 523 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 GAS7O60861 476 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 NF2P35240 595 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 ELF2Q15723 593 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 LRP10Q7Z4F1 713 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 PCDHB13Q9Y5F0 798 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 MYL1P05976 194 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 GOLGA8FQ08AF8 430 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 GOLGA8DPQ0D2H9 430 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 CCDC93Q567U6 631 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 RRAGAQ7L523 313 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 SLFN12Q8IYM2 578 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 TDRD3Q9H7E2 651 aaKnown RBP6.99□□□□□ -1.29
PRKDC-202ENST00000338368 ADAM9Q13443 819 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 GRM4Q14833 912 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 USP49Q70CQ1 688 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 ENGASEQ8NFI3 743 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 DISC1Q9NRI5 854 aa6.99□□□□□ -1.29
PRKDC-202ENST00000338368 FAM205CA6NFA0 338 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 FAM196BA6NMK8 535 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 EEF1GP26641 437 aaKnown RBP6.98□□□□□ -1.29
PRKDC-202ENST00000338368 IQCDQ96DY2 449 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 ALAS1P13196 640 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 SELENOOQ9BVL4 669 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 TMOD4Q9NZQ9 345 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 DKC1O60832 514 aaKnown RBP eCLIP6.98□□□□□ -1.298e-7■■■□□ 14.9
PRKDC-202ENST00000338368 PABPC4Q13310 644 aaKnown RBP eCLIP6.98□□□□□ -1.292e-7■□□□□ 10.6
PRKDC-202ENST00000338368 IQCB1Q15051 598 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 TAX1BP1Q86VP1 789 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 GDAQ9Y2T3 454 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 PRR29P0C7W0 189 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 KLRK1P26718 216 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 DHX40Q8IX18 779 aaKnown RBP6.98□□□□□ -1.29
PRKDC-202ENST00000338368 HOOK2Q96ED9 719 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 TSPYL1Q9H0U9 437 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 NUCKS1Q9H1E3 243 aaKnown RBP6.98□□□□□ -1.29
PRKDC-202ENST00000338368 MRPL44Q9H9J2 332 aaKnown RBP6.98□□□□□ -1.29
PRKDC-202ENST00000338368 AS3MTQ9HBK9 375 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 COL4A3BPQ9Y5P4 624 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 PNMA6FA0A0J9YX94 578 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 POLR2FP61218 127 aaKnown RBP6.98□□□□□ -1.29
PRKDC-202ENST00000338368 BARHL2Q9NY43 387 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 RAD17O75943 681 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 CACNB1Q02641 598 aaPredicted RBP6.98□□□□□ -1.29
PRKDC-202ENST00000338368 TYW1BQ6NUM6 668 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 MIER3Q7Z3K6 550 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 OGFRQ9NZT2 677 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 TCHHQ07283 1943 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 UBE2Q2LH0YL09 131 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 GNA14O95837 355 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 PLCG1P19174 1290 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 ATP2C1P98194 919 aaPredicted RBP6.98□□□□□ -1.29
PRKDC-202ENST00000338368 ASIC2Q16515 512 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 ERCC6LQ2NKX8 1250 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 CERKQ8TCT0 537 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 IL17RAQ96F46 866 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 TEKT3Q9BXF9 490 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 HSPA1LP34931 641 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 SEPT2Q15019 361 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 TMEM179Q6ZVK1 233 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 HOMER2Q9NSB8 354 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 ARMCX3Q9UH62 379 aaPredicted RBP6.98□□□□□ -1.29
PRKDC-202ENST00000338368 STK17AQ9UEE5 414 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 TUBE1Q9UJT0 475 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 FLT1P17948 1338 aa6.98□□□□□ -1.29
PRKDC-202ENST00000338368 TTLL6Q8N841 843 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 DPF2Q92785 391 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 PP2D1A8MPX8 630 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 SMTNP53814 917 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 FNBP4Q8N3X1 1017 aaPredicted RBP6.97□□□□□ -1.29
PRKDC-202ENST00000338368 ZBTB9Q96C00 473 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 IMPG2Q9BZV3 1241 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 ATP6V0A2Q9Y487 856 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 DAGLAQ9Y4D2 1042 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 VGLL2Q8N8G2 317 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 CLEC11AQ9Y240 323 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 FLOT1O75955 427 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 IFFO1Q0D2I5 559 aa6.97□□□□□ -1.29
PRKDC-202ENST00000338368 TSGA10Q9BZW7 698 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms