RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 SPZ1Q9BXG8 430 aa14.59□□□□□ -0.07
PRIM1-201ENST00000338193 SPATC1LQ9H0A9 340 aa14.59□□□□□ -0.07
PRIM1-201ENST00000338193 SLKQ9H2G2 1235 aaPredicted RBP14.59□□□□□ -0.07
PRIM1-201ENST00000338193 EFCC1Q9HA90 598 aa14.59□□□□□ -0.07
PRIM1-201ENST00000338193 SAGE1Q9NXZ1 904 aa14.59□□□□□ -0.07
PRIM1-201ENST00000338193 RABGAP1Q9Y3P9 1069 aa14.59□□□□□ -0.07
PRIM1-201ENST00000338193 LCTP09848 1927 aa14.58□□□□□ -0.08
PRIM1-201ENST00000338193 GPR25O00155 361 aa14.58□□□□□ -0.08
PRIM1-201ENST00000338193 HSPA8P11142 646 aaKnown RBP14.58□□□□□ -0.08
PRIM1-201ENST00000338193 KIF5BP33176 963 aa14.58□□□□□ -0.08
PRIM1-201ENST00000338193 PKN1Q16512 942 aa14.58□□□□□ -0.08
PRIM1-201ENST00000338193 USH1GQ495M9 461 aa14.58□□□□□ -0.08
PRIM1-201ENST00000338193 MUM1L1Q5H9M0 696 aa14.58□□□□□ -0.08
PRIM1-201ENST00000338193 ZNF296Q8WUU4 475 aaPredicted RBP14.58□□□□□ -0.08
PRIM1-201ENST00000338193 RBM28Q9NW13 759 aaKnown RBP14.58□□□□□ -0.08
PRIM1-201ENST00000338193 ZBED4O75132 1171 aa14.57□□□□□ -0.08
PRIM1-201ENST00000338193 GCLCP48506 637 aaPredicted RBP14.57□□□□□ -0.08
PRIM1-201ENST00000338193 FAM110CQ1W6H9 321 aa14.57□□□□□ -0.08
PRIM1-201ENST00000338193 SNRNP48Q6IEG0 339 aaKnown RBP14.57□□□□□ -0.08
PRIM1-201ENST00000338193 TYW1BQ6NUM6 668 aa14.57□□□□□ -0.08
PRIM1-201ENST00000338193 NSUN7Q8NE18 718 aaKnown RBP14.57□□□□□ -0.08
PRIM1-201ENST00000338193 CD99L2Q8TCZ2 262 aa14.57□□□□□ -0.08
PRIM1-201ENST00000338193 GPKOWQ92917 476 aaPredicted RBP eCLIP14.57□□□□□ -0.08
PRIM1-201ENST00000338193 COA7Q96BR5 231 aa14.57□□□□□ -0.08
PRIM1-201ENST00000338193 HOMER2Q9NSB8 354 aa14.57□□□□□ -0.08
PRIM1-201ENST00000338193 GJB4Q9NTQ9 266 aa14.57□□□□□ -0.08
PRIM1-201ENST00000338193 V9GY48 417 aaPredicted RBP14.57□□□□□ -0.08
PRIM1-201ENST00000338193 CASP8AP2Q9UKL3 1982 aa14.56□□□□□ -0.08
PRIM1-201ENST00000338193 DOCK3Q8IZD9 2030 aa14.56□□□□□ -0.08
PRIM1-201ENST00000338193 RBBP6Q7Z6E9 1792 aaKnown RBP14.56□□□□□ -0.08
PRIM1-201ENST00000338193 OPLAHO14841 1288 aa14.56□□□□□ -0.08
PRIM1-201ENST00000338193 FDPSP14324 419 aaKnown RBP14.56□□□□□ -0.08
PRIM1-201ENST00000338193 IFNAR1P17181 557 aa14.56□□□□□ -0.08
PRIM1-201ENST00000338193 ERCC3P19447 782 aa14.56□□□□□ -0.08
PRIM1-201ENST00000338193 RIOX2Q8IUF8 465 aa14.56□□□□□ -0.08
PRIM1-201ENST00000338193 GPRC5AQ8NFJ5 357 aa14.56□□□□□ -0.08
PRIM1-201ENST00000338193 CLEC4DQ8WXI8 215 aa14.56□□□□□ -0.08
PRIM1-201ENST00000338193 TBC1D5Q92609 795 aa14.56□□□□□ -0.08
PRIM1-201ENST00000338193 TRIM47Q96LD4 638 aa14.56□□□□□ -0.08
PRIM1-201ENST00000338193 SLC26A6Q9BXS9 759 aa14.56□□□□□ -0.08
PRIM1-201ENST00000338193 CCPG1Q9ULG6 757 aa14.56□□□□□ -0.08
PRIM1-201ENST00000338193 NFIBO00712 420 aa14.55□□□□□ -0.08
PRIM1-201ENST00000338193 ATP2A1O14983 1001 aa14.55□□□□□ -0.08
PRIM1-201ENST00000338193 ZBTB5O15062 677 aa14.55□□□□□ -0.08
PRIM1-201ENST00000338193 ICAM1P05362 532 aa14.55□□□□□ -0.08
PRIM1-201ENST00000338193 ALAS1P13196 640 aa14.55□□□□□ -0.08
PRIM1-201ENST00000338193 STAT3P40763 770 aa14.55□□□□□ -0.08
PRIM1-201ENST00000338193 GNAQP50148 359 aa14.55□□□□□ -0.08
PRIM1-201ENST00000338193 WWC2Q6AWC2 1192 aa14.55□□□□□ -0.08
PRIM1-201ENST00000338193 MB21D1Q8N884 522 aa14.55□□□□□ -0.08
PRIM1-201ENST00000338193 PURBQ96QR8 312 aaKnown RBP14.55□□□□□ -0.08
PRIM1-201ENST00000338193 PNMA6FA0A0J9YX94 578 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 PTPDC1A2A3K4 754 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 FMNL1O95466 1100 aaPredicted RBP14.54□□□□□ -0.08
PRIM1-201ENST00000338193 SMARCA1P28370 1054 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 LBX1P52954 281 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 LACTBP83111 547 aaPredicted RBP14.54□□□□□ -0.08
PRIM1-201ENST00000338193 SP3Q02447 781 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 NCAPG2Q86XI2 1143 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 FBXO11Q86XK2 927 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 SNX21Q969T3 373 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 RRP36Q96EU6 259 aaKnown RBP14.54□□□□□ -0.08
PRIM1-201ENST00000338193 DDX11Q96FC9 970 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 LZTS2Q9BRK4 669 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 BEGAINQ9BUH8 593 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 TEX13BQ9BXU2 312 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 TSHZ2Q9NRE2 1034 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 RNF146Q9NTX7 359 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 ZNFX1Q9P2E3 1918 aaKnown RBP14.54□□□□□ -0.08
PRIM1-201ENST00000338193 CENPFP49454 3210 aa14.54□□□□□ -0.08
PRIM1-201ENST00000338193 STXBP3O00186 592 aa14.53□□□□□ -0.08
PRIM1-201ENST00000338193 PRPF3O43395 683 aaKnown RBP14.53□□□□□ -0.08
PRIM1-201ENST00000338193 FOSBP53539 338 aa14.53□□□□□ -0.08
PRIM1-201ENST00000338193 WDR78Q5VTH9 848 aa14.53□□□□□ -0.08
PRIM1-201ENST00000338193 GTF3C2Q8WUA4 911 aaPredicted RBP14.53□□□□□ -0.08
PRIM1-201ENST00000338193 ZSCAN31Q96LW9 406 aaPredicted RBP14.53□□□□□ -0.08
PRIM1-201ENST00000338193 TRERF1Q96PN7 1200 aa14.53□□□□□ -0.08
PRIM1-201ENST00000338193 GABRQQ9UN88 632 aa14.53□□□□□ -0.08
PRIM1-201ENST00000338193 DDX49Q9Y6V7 483 aaKnown RBP14.53□□□□□ -0.08
PRIM1-201ENST00000338193 CCDC196A0A1B0GTZ2 297 aa14.52□□□□□ -0.08
PRIM1-201ENST00000338193 CPLX1O14810 134 aa14.52□□□□□ -0.08
PRIM1-201ENST00000338193 FKTNO75072 461 aa14.52□□□□□ -0.08
PRIM1-201ENST00000338193 PSMC4P43686 418 aa14.52□□□□□ -0.08
PRIM1-201ENST00000338193 OAZ1P54368 228 aa14.52□□□□□ -0.08
PRIM1-201ENST00000338193 CUL4AQ13619 759 aa14.52□□□□□ -0.08
PRIM1-201ENST00000338193 PPP2R5BQ15173 497 aa14.52□□□□□ -0.08
PRIM1-201ENST00000338193 PFKFB3Q16875 520 aaPredicted RBP14.52□□□□□ -0.08
PRIM1-201ENST00000338193 SLC30A10Q6XR72 485 aa14.52□□□□□ -0.08
PRIM1-201ENST00000338193 HEATR3Q7Z4Q2 680 aa14.52□□□□□ -0.08
PRIM1-201ENST00000338193 GPR142Q7Z601 462 aa14.52□□□□□ -0.08
PRIM1-201ENST00000338193 SMARCC2Q8TAQ2 1214 aa14.52□□□□□ -0.08
PRIM1-201ENST00000338193 RNF26Q9BY78 433 aaPredicted RBP14.52□□□□□ -0.08
PRIM1-201ENST00000338193 SH2B1Q9NRF2 756 aaPredicted RBP14.52□□□□□ -0.08
PRIM1-201ENST00000338193 CTDP1Q9Y5B0 961 aaPredicted RBP14.52□□□□□ -0.08
PRIM1-201ENST00000338193 PCDHA1Q9Y5I3 950 aa14.52□□□□□ -0.08
PRIM1-201ENST00000338193 K7ELQ4 463 aaPredicted RBP14.51□□□□□ -0.09
PRIM1-201ENST00000338193 PGK2P07205 417 aa14.51□□□□□ -0.09
PRIM1-201ENST00000338193 FDX1P10109 184 aa14.51□□□□□ -0.09
PRIM1-201ENST00000338193 SCG2P13521 617 aa14.51□□□□□ -0.09
PRIM1-201ENST00000338193 SSRP1Q08945 709 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms