RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 ALG1Q9BT22 464 aa20.19■□□□□ 0.82
CHGA-202ENST00000334654 SMC3Q9UQE7 1217 aa20.19■□□□□ 0.82
CHGA-202ENST00000334654 ABCB11O95342 1321 aa20.19■□□□□ 0.82
CHGA-202ENST00000334654 ZNFX1Q9P2E3 1918 aaKnown RBP20.19■□□□□ 0.82
CHGA-202ENST00000334654 hCG_1984214I3L0E3 225 aa20.18■□□□□ 0.82
CHGA-202ENST00000334654 ERCC3P19447 782 aa20.18■□□□□ 0.82
CHGA-202ENST00000334654 ZNF713Q8N859 430 aaPredicted RBP20.18■□□□□ 0.82
CHGA-202ENST00000334654 SPRYD3Q8NCJ5 442 aa20.18■□□□□ 0.82
CHGA-202ENST00000334654 SHCBP1Q8NEM2 672 aa20.18■□□□□ 0.82
CHGA-202ENST00000334654 TRERF1Q96PN7 1200 aa20.18■□□□□ 0.82
CHGA-202ENST00000334654 EFCC1Q9HA90 598 aa20.18■□□□□ 0.82
CHGA-202ENST00000334654 VPS54Q9P1Q0 977 aa20.18■□□□□ 0.82
CHGA-202ENST00000334654 PNMA2Q9UL42 364 aa20.18■□□□□ 0.82
CHGA-202ENST00000334654 SLC25A27O95847 323 aa20.18■□□□□ 0.82
CHGA-202ENST00000334654 TKFCQ3LXA3 575 aa20.18■□□□□ 0.82
CHGA-202ENST00000334654 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.18■□□□□ 0.82
CHGA-202ENST00000334654 TBC1D5Q92609 795 aa20.18■□□□□ 0.82
CHGA-202ENST00000334654 SH3GLB2Q9NR46 395 aa20.18■□□□□ 0.82
CHGA-202ENST00000334654 HOMER2Q9NSB8 354 aa20.18■□□□□ 0.82
CHGA-202ENST00000334654 RNF146Q9NTX7 359 aa20.18■□□□□ 0.82
CHGA-202ENST00000334654 MGAMO43451 1857 aa20.17■□□□□ 0.82
CHGA-202ENST00000334654 NFIBO00712 420 aa20.17■□□□□ 0.82
CHGA-202ENST00000334654 ADAMTS3O15072 1205 aa20.17■□□□□ 0.82
CHGA-202ENST00000334654 CTGFP29279 349 aa20.17■□□□□ 0.82
CHGA-202ENST00000334654 CAP1Q01518 475 aa20.17■□□□□ 0.82
CHGA-202ENST00000334654 NPY5RQ15761 445 aa20.17■□□□□ 0.82
CHGA-202ENST00000334654 CHST13Q8NET6 341 aa20.17■□□□□ 0.82
CHGA-202ENST00000334654 WASF1Q92558 559 aa20.17■□□□□ 0.82
CHGA-202ENST00000334654 MRPL11Q9Y3B7 192 aaKnown RBP20.17■□□□□ 0.82
CHGA-202ENST00000334654 ZSWIM8A7E2V4 1837 aa20.16■□□□□ 0.82
CHGA-202ENST00000334654 NAPAP54920 295 aa20.16■□□□□ 0.82
CHGA-202ENST00000334654 TRAF1Q13077 416 aa20.16■□□□□ 0.82
CHGA-202ENST00000334654 PPP1R18Q6NYC8 613 aa20.16■□□□□ 0.82
CHGA-202ENST00000334654 NCAPG2Q86XI2 1143 aa20.16■□□□□ 0.82
CHGA-202ENST00000334654 PHF20Q9BVI0 1012 aa20.16■□□□□ 0.82
CHGA-202ENST00000334654 ZMYND12Q9H0C1 365 aa20.16■□□□□ 0.82
CHGA-202ENST00000334654 ESYT2A0FGR8 921 aa20.15■□□□□ 0.82
CHGA-202ENST00000334654 GPR25O00155 361 aa20.15■□□□□ 0.82
CHGA-202ENST00000334654 CCNA1P78396 465 aa20.15■□□□□ 0.82
CHGA-202ENST00000334654 GHRHRQ02643 423 aa20.15■□□□□ 0.82
CHGA-202ENST00000334654 NOM1Q5C9Z4 860 aaKnown RBP20.15■□□□□ 0.82
CHGA-202ENST00000334654 FAM184AQ8NB25 1140 aa20.15■□□□□ 0.82
CHGA-202ENST00000334654 MROH8Q9H579 483 aa20.15■□□□□ 0.82
CHGA-202ENST00000334654 ACAD9Q9H845 621 aa20.15■□□□□ 0.82
CHGA-202ENST00000334654 KCNJ14Q9UNX9 436 aa20.15■□□□□ 0.82
CHGA-202ENST00000334654 RBBP6Q7Z6E9 1792 aaKnown RBP20.14■□□□□ 0.82
CHGA-202ENST00000334654 LCTP09848 1927 aa20.14■□□□□ 0.81
CHGA-202ENST00000334654 SMCO2A6NFE2 343 aa20.14■□□□□ 0.81
CHGA-202ENST00000334654 COPB2P35606 906 aa20.14■□□□□ 0.81
CHGA-202ENST00000334654 KRT40Q6A162 431 aa20.14■□□□□ 0.81
CHGA-202ENST00000334654 FAM177A1Q8N128 213 aaPredicted RBP20.14■□□□□ 0.81
CHGA-202ENST00000334654 RGS22Q8NE09 1264 aa20.14■□□□□ 0.81
CHGA-202ENST00000334654 FBXO40Q9UH90 709 aa20.14■□□□□ 0.81
CHGA-202ENST00000334654 TSKSQ9UJT2 592 aa20.14■□□□□ 0.81
CHGA-202ENST00000334654 PLXNB2O15031 1838 aa20.14■□□□□ 0.81
CHGA-202ENST00000334654 MEIS2O14770 477 aa20.13■□□□□ 0.81
CHGA-202ENST00000334654 HSP90AA1P07900 732 aaKnown RBP20.13■□□□□ 0.81
CHGA-202ENST00000334654 FOSBP53539 338 aa20.13■□□□□ 0.81
CHGA-202ENST00000334654 LACTBP83111 547 aaPredicted RBP20.13■□□□□ 0.81
CHGA-202ENST00000334654 SP3Q02447 781 aa20.13■□□□□ 0.81
CHGA-202ENST00000334654 FBXO18Q8NFZ0 1043 aa20.13■□□□□ 0.81
CHGA-202ENST00000334654 ARHGAP39Q9C0H5 1083 aa20.13■□□□□ 0.81
CHGA-202ENST00000334654 RIC8AQ9NPQ8 531 aa20.13■□□□□ 0.81
CHGA-202ENST00000334654 A1CFQ9NQ94 594 aaKnown RBP20.13■□□□□ 0.81
CHGA-202ENST00000334654 MAPK4P31152 587 aa20.12■□□□□ 0.81
CHGA-202ENST00000334654 HSD17B4P51659 736 aa20.12■□□□□ 0.81
CHGA-202ENST00000334654 GPR142Q7Z601 462 aa20.12■□□□□ 0.81
CHGA-202ENST00000334654 C8orf76Q96K31 380 aa20.12■□□□□ 0.81
CHGA-202ENST00000334654 BEGAINQ9BUH8 593 aa20.12■□□□□ 0.81
CHGA-202ENST00000334654 PSTPIP2Q9H939 334 aa20.12■□□□□ 0.81
CHGA-202ENST00000334654 M0R2N6 131 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 CLK2P49760 499 aaKnown RBP20.11■□□□□ 0.81
CHGA-202ENST00000334654 GUCY1B3Q02153 619 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 LARP1BQ659C4 914 aaKnown RBP20.11■□□□□ 0.81
CHGA-202ENST00000334654 USP17L6PQ6QN14 398 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 CCDC148Q8NFR7 591 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 CCDC12Q8WUD4 166 aaPredicted RBP20.11■□□□□ 0.81
CHGA-202ENST00000334654 MAF1Q9H063 256 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 CYP39A1Q9NYL5 469 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 KIF3AQ9Y496 699 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 PIK3CDO00329 1044 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 CFBP00751 764 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 MMP1P03956 469 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 SYT1P21579 422 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 PTPREP23469 700 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 NLRP5P59047 1200 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 RPS6P62753 249 aaKnown RBP20.11■□□□□ 0.81
CHGA-202ENST00000334654 BAATQ14032 418 aaPredicted RBP20.11■□□□□ 0.81
CHGA-202ENST00000334654 NSMFQ6X4W1 530 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 SLC30A10Q6XR72 485 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 PLEKHH3Q7Z736 793 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 MCF2L2Q86YR7 1114 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 SAMD3Q8N6K7 520 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 DAGLBQ8NCG7 672 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 ZNF296Q8WUU4 475 aaPredicted RBP20.11■□□□□ 0.81
CHGA-202ENST00000334654 TRIM47Q96LD4 638 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 COL20A1Q9P218 1284 aa20.11■□□□□ 0.81
CHGA-202ENST00000334654 ZNF236Q9UL36 1845 aa20.1■□□□□ 0.81
CHGA-202ENST00000334654 DNAJC25-GNG10A0A024R161 153 aa20.1■□□□□ 0.81
CHGA-202ENST00000334654 STRNO43815 780 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms