RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TRIML1Q8N9V2 468 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 CLIC6Q96NY7 704 aa10.69□□□□□ -0.7
COL4A6-201ENST00000334504 ARHGEF9O43307 516 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 PRPF6O94906 941 aaKnown RBP10.68□□□□□ -0.7
COL4A6-201ENST00000334504 TNNI1P19237 187 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 CMA1P23946 247 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 OTUD6AQ7L8S5 288 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 TRIM50Q86XT4 487 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 POLR3CQ9BUI4 534 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-201ENST00000334504 MAPK13O15264 365 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 PDE6CP51160 858 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 RWDD2BP57060 319 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 TIMM10P62072 90 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 HDLBPQ00341 1268 aaKnown RBP10.68□□□□□ -0.7
COL4A6-201ENST00000334504 PDE1BQ01064 536 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 SEPT2Q15019 361 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 MTHFSDQ2M296 383 aaKnown RBP10.68□□□□□ -0.7
COL4A6-201ENST00000334504 RAPH1Q70E73 1250 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 ACRBPQ8NEB7 543 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 CDKL2Q92772 493 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 PRDM1O75626 825 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 RPN1P04843 607 aaKnown RBP10.68□□□□□ -0.7
COL4A6-201ENST00000334504 NCF2P19878 526 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-201ENST00000334504 C11orf57Q6ZUT1 292 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-201ENST00000334504 HOMEZQ8IX15 550 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 HIPK4Q8NE63 616 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 CCDC124Q96CT7 223 aaKnown RBP10.68□□□□□ -0.7
COL4A6-201ENST00000334504 FGD4Q96M96 766 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 TRAIPQ9BWF2 469 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 SATB2Q9UPW6 733 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 BZW2Q9Y6E2 419 aaKnown RBP10.68□□□□□ -0.7
COL4A6-201ENST00000334504 SOWAHDA6NJG2 315 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 E7EWF7 191 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 SGK1O00141 431 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 IRS4O14654 1257 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-201ENST00000334504 TOM1L1O75674 476 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 CHGBP05060 677 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 PDCLQ13371 301 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 ART3Q13508 389 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 CYP4F22Q6NT55 531 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 KRT28Q7Z3Y7 464 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 GPBP1Q86WP2 473 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 ST7Q9NRC1 585 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 G3BP2Q9UN86 482 aaKnown RBP10.68□□□□□ -0.7
COL4A6-201ENST00000334504 CLIC4Q9Y696 253 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 TRIM37O94972 964 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 SLMAPQ14BN4 828 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 CAPRIN2Q6IMN6 1127 aaKnown RBP10.68□□□□□ -0.7
COL4A6-201ENST00000334504 DBNDD2Q9BQY9 259 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 OSBPL1AQ9BXW6 950 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 TRPC5Q9UL62 973 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-201ENST00000334504 FIS1Q9Y3D6 152 aa10.68□□□□□ -0.7
COL4A6-201ENST00000334504 PARP9Q8IXQ6 854 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 FNBP4Q8N3X1 1017 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-201ENST00000334504 MCUQ8NE86 351 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 MAML1Q92585 1016 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 APPBP2Q92624 585 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 THOC1Q96FV9 657 aaKnown RBP10.67□□□□□ -0.7
COL4A6-201ENST00000334504 ADAM21Q9UKJ8 722 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 MESDQ14696 234 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 TTLL11Q8NHH1 800 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 JDP2Q8WYK2 163 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 ANAPC5Q9UJX4 755 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 NIP7Q9Y221 180 aaKnown RBP eCLIP10.67□□□□□ -0.7
COL4A6-201ENST00000334504 NOS1P29475 1434 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 POLR3AO14802 1390 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-201ENST00000334504 TMTC4Q5T4D3 741 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 G2E3Q7L622 706 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 TTC6Q86TZ1 520 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 SPTLC3Q9NUV7 552 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 DKC1O60832 514 aaKnown RBP eCLIP10.67□□□□□ -0.7
COL4A6-201ENST00000334504 AKAP4Q5JQC9 854 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 CDAN1Q8IWY9 1227 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 NLRP3Q96P20 1036 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 SERPINI1Q99574 410 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 PANK4Q9NVE7 773 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 NDUFB9Q9Y6M9 179 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 H7C0C1 242 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 ATP5OP48047 213 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 NEK2P51955 445 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 CARD10Q9BWT7 1032 aa10.67□□□□□ -0.7
COL4A6-201ENST00000334504 FBXO31Q5XUX0 539 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-201ENST00000334504 PHACTR3Q96KR7 559 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 SETDB2Q96T68 719 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 GTPBP6O43824 516 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-201ENST00000334504 MYCLP12524 364 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-201ENST00000334504 PSMC1P62191 440 aaKnown RBP10.66□□□□□ -0.7
COL4A6-201ENST00000334504 TPCN1Q9ULQ1 816 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 ACEP12821 1306 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 RASGRF2O14827 1237 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 KDM1AO60341 852 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 FTCDO95954 541 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 NBPF10Q6P3W6 841 aaKnown RBP10.66□□□□□ -0.7
COL4A6-201ENST00000334504 CNOT6LQ96LI5 555 aaKnown RBP10.66□□□□□ -0.7
COL4A6-201ENST00000334504 RIOK1Q9BRS2 568 aaKnown RBP10.66□□□□□ -0.7
COL4A6-201ENST00000334504 SLC39A2Q9NP94 309 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 HAUS2Q9NVX0 235 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 PLAAQ9Y263 795 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 PRXQ9BXM0 1461 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 PGRMC1O00264 195 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms