RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CALML4Q96GE6 196 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 SRRTQ9BXP5 876 aaKnown RBP13.22□□□□□ -0.29
HDAC6-201ENST00000334136 TAF6LQ9Y6J9 622 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 LTBP3Q9NS15 1303 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 CTAGE15A4D2H0 777 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 ADM5C9JUS6 153 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 CTAGE8P0CG41 777 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 KCNA3P22001 575 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 TOB2Q14106 344 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-201ENST00000334136 NAA30Q147X3 362 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-201ENST00000334136 KIF22Q14807 665 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 SPA17Q15506 151 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 CTAGE6Q86UF2 777 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 CTAGE4Q8IX94 777 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 ZNF280CQ8ND82 737 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 RBM46Q8TBY0 533 aaKnown RBP13.22□□□□□ -0.29
HDAC6-201ENST00000334136 GOLGA1Q92805 767 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 CPVLQ9H3G5 476 aa13.22□□□□□ -0.29
HDAC6-201ENST00000334136 YEATS4O95619 227 aa13.21□□□□□ -0.29
HDAC6-201ENST00000334136 USP8P40818 1118 aa13.21□□□□□ -0.29
HDAC6-201ENST00000334136 MCF2L2Q86YR7 1114 aa13.21□□□□□ -0.29
HDAC6-201ENST00000334136 XPO4Q9C0E2 1151 aaKnown RBP13.21□□□□□ -0.29
HDAC6-201ENST00000334136 HOXC10Q9NYD6 342 aa13.21□□□□□ -0.29
HDAC6-201ENST00000334136 NYAP2Q9P242 653 aa13.21□□□□□ -0.29
HDAC6-201ENST00000334136 CAP2P40123 477 aa13.21□□□□□ -0.29
HDAC6-201ENST00000334136 PPP2R3AQ06190 1150 aa13.21□□□□□ -0.29
HDAC6-201ENST00000334136 ZNF174Q15697 407 aa13.21□□□□□ -0.29
HDAC6-201ENST00000334136 ZNF569Q5MCW4 686 aa13.21□□□□□ -0.29
HDAC6-201ENST00000334136 RNF187Q5TA31 235 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-201ENST00000334136 IQCEQ6IPM2 695 aa13.21□□□□□ -0.29
HDAC6-201ENST00000334136 ZFPM1Q8IX07 1006 aa13.21□□□□□ -0.29
HDAC6-201ENST00000334136 DRC1Q96MC2 740 aa13.21□□□□□ -0.29
HDAC6-201ENST00000334136 NAP1L4Q99733 375 aaKnown RBP13.21□□□□□ -0.29
HDAC6-201ENST00000334136 GCOM1H8Y6P7 765 aaPredicted RBP13.21□□□□□ -0.3
HDAC6-201ENST00000334136 CCDC175P0C221 793 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 POLR2MP0CAP2 368 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 INPP5BP32019 993 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 MTMR2Q13614 643 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 BLIDQ8IZY5 108 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 ERMNQ8TAM6 284 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 EHD4Q9H223 541 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 GBA2Q9HCG7 927 aaPredicted RBP13.21□□□□□ -0.3
HDAC6-201ENST00000334136 PLEKHA8P1O95397 391 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 LARGE1O95461 756 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 MNAT1P51948 309 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 FANCCQ00597 558 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 KCTD2Q14681 263 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 FASTKD5Q7L8L6 764 aaKnown RBP13.21□□□□□ -0.3
HDAC6-201ENST00000334136 TAX1BP1Q86VP1 789 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 SGMS1Q86VZ5 419 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 NSUN7Q8NE18 718 aaKnown RBP13.21□□□□□ -0.3
HDAC6-201ENST00000334136 SLC5A4Q9NY91 659 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 PKD2L1Q9P0L9 805 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 MRVI1Q9Y6F6 885 aa13.21□□□□□ -0.3
HDAC6-201ENST00000334136 EXOSC10Q01780 885 aaKnown RBP13.2□□□□□ -0.3
HDAC6-201ENST00000334136 MYL5Q02045 173 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 SPECC1Q5M775 1068 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 COA7Q96BR5 231 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 FAM198AQ9UFP1 575 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 UBR2Q8IWV8 1755 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 FZD9O00144 591 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 SP4Q02446 784 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 CDC37Q16543 378 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-201ENST00000334136 DNAJC21Q5F1R6 531 aaKnown RBP13.2□□□□□ -0.3
HDAC6-201ENST00000334136 SCYL3Q8IZE3 742 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 BAG1Q99933 345 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-201ENST00000334136 VIRMAQ69YN4 1812 aaKnown RBP13.2□□□□□ -0.3
HDAC6-201ENST00000334136 C19orf81C9J6K1 198 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-201ENST00000334136 YBX3P16989 372 aaKnown RBP eCLIP13.2□□□□□ -0.39e-6■■■□□ 18.1
HDAC6-201ENST00000334136 YY1P25490 414 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 TMTC3Q6ZXV5 915 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 LRRC8AQ8IWT6 810 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 PRPF38AQ8NAV1 312 aaKnown RBP13.2□□□□□ -0.3
HDAC6-201ENST00000334136 SLF1Q9BQI6 1058 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 PLCD4Q9BRC7 762 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 FEM1BQ9UK73 627 aa13.2□□□□□ -0.3
HDAC6-201ENST00000334136 SNAP25P60880 206 aa13.19□□□□□ -0.3
HDAC6-201ENST00000334136 DHX58Q96C10 678 aa13.19□□□□□ -0.3
HDAC6-201ENST00000334136 USP28Q96RU2 1077 aa13.19□□□□□ -0.3
HDAC6-201ENST00000334136 NDUFB10O96000 172 aa13.19□□□□□ -0.3
HDAC6-201ENST00000334136 GTF2A1P52655 376 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-201ENST00000334136 CT47A1Q5JQC4 288 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-201ENST00000334136 NEK11Q8NG66 645 aa13.19□□□□□ -0.3
HDAC6-201ENST00000334136 IGDCC4Q8TDY8 1250 aa13.19□□□□□ -0.3
HDAC6-201ENST00000334136 CAPZA3Q96KX2 299 aa13.19□□□□□ -0.3
HDAC6-201ENST00000334136 PRPF3O43395 683 aaKnown RBP13.19□□□□□ -0.3
HDAC6-201ENST00000334136 DTHD1Q6ZMT9 781 aa13.19□□□□□ -0.3
HDAC6-201ENST00000334136 FBXO18Q8NFZ0 1043 aa13.19□□□□□ -0.3
HDAC6-201ENST00000334136 GINM1Q9NU53 330 aa13.19□□□□□ -0.3
HDAC6-201ENST00000334136 PNMA6FA0A0J9YX94 578 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 BTBD18B2RXH4 712 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 POTEB2H3BUK9 544 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 CCNT1O60563 726 aaKnown RBP13.18□□□□□ -0.3
HDAC6-201ENST00000334136 MCTP2Q6DN12 878 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 GALNT17Q6IS24 598 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 ZC3H15Q8WU90 426 aaKnown RBP13.18□□□□□ -0.3
HDAC6-201ENST00000334136 VCPKMTQ9H867 229 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 BCCIPQ9P287 314 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDAC6-201ENST00000334136 USP17L15C9J2P7 530 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms