RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TXLNBQ8N3L3 684 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 GPR101Q96P66 508 aaPredicted RBP13.82□□□□□ -0.2
VPS33B-201ENST00000333371 DUSP9Q99956 384 aaKnown RBP13.82□□□□□ -0.2
VPS33B-201ENST00000333371 ATP8A2Q9NTI2 1148 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 STX8Q9UNK0 236 aa13.82□□□□□ -0.2
VPS33B-201ENST00000333371 M0R2N6 131 aa13.81□□□□□ -0.2
VPS33B-201ENST00000333371 ZNF185O15231 689 aa13.81□□□□□ -0.2
VPS33B-201ENST00000333371 PCP11498 1178 aaKnown RBP13.81□□□□□ -0.2
VPS33B-201ENST00000333371 KIF5BP33176 963 aa13.81□□□□□ -0.2
VPS33B-201ENST00000333371 HSPA1LP34931 641 aa13.81□□□□□ -0.2
VPS33B-201ENST00000333371 SH3RF3Q8TEJ3 882 aaPredicted RBP13.81□□□□□ -0.2
VPS33B-201ENST00000333371 CCDC102AQ96A19 550 aa13.81□□□□□ -0.2
VPS33B-201ENST00000333371 ARPP21Q9UBL0 812 aaPredicted RBP13.81□□□□□ -0.2
VPS33B-201ENST00000333371 SAP30BPQ9UHR5 308 aaKnown RBP13.81□□□□□ -0.2
VPS33B-201ENST00000333371 CALML3P27482 149 aa13.81□□□□□ -0.2
VPS33B-201ENST00000333371 STK4Q13043 487 aa13.81□□□□□ -0.2
VPS33B-201ENST00000333371 CCDC178Q5BJE1 867 aa13.81□□□□□ -0.2
VPS33B-201ENST00000333371 TTI2Q6NXR4 508 aa13.81□□□□□ -0.2
VPS33B-201ENST00000333371 DZIP1Q86YF9 867 aaKnown RBP13.81□□□□□ -0.2
VPS33B-201ENST00000333371 PDS5AQ29RF7 1337 aaKnown RBP13.8□□□□□ -0.2
VPS33B-201ENST00000333371 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.8□□□□□ -0.2
VPS33B-201ENST00000333371 ERLIN1O75477 346 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 PLCG1P19174 1290 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 TRIM14Q14142 442 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 TRAPPC11Q7Z392 1133 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 CSGALNACT2Q8N6G5 542 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 DNAJC7Q99615 494 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 MKNK2Q9HBH9 465 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 LCMT1Q9UIC8 334 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 TNRC6CQ9HCJ0 1690 aaKnown RBP13.8□□□□□ -0.2
VPS33B-201ENST00000333371 PLEKP08567 350 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-201ENST00000333371 TRIM21P19474 475 aaKnown RBP13.8□□□□□ -0.2
VPS33B-201ENST00000333371 TM4SF1P30408 202 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 GPS2Q13227 327 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 TXNRD1Q16881 649 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 LETM2Q2VYF4 491 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 ANKRD40Q6AI12 368 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 KRT26Q7Z3Y9 468 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 SMCR8Q8TEV9 937 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-201ENST00000333371 PCMTD1Q96MG8 357 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-201ENST00000333371 TUBGCP2Q9BSJ2 902 aa13.8□□□□□ -0.2
VPS33B-201ENST00000333371 MACROD2A1Z1Q3 448 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 STXBP3O00186 592 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 MRPS25P82663 173 aaKnown RBP13.79□□□□□ -0.2
VPS33B-201ENST00000333371 GRAPQ13588 217 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 C12orf60Q5U649 245 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 FOXR1Q6PIV2 292 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 KIAA1328Q86T90 577 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 GIMAP8Q8ND71 665 aaPredicted RBP13.79□□□□□ -0.2
VPS33B-201ENST00000333371 GRAPLQ8TC17 118 aaPredicted RBP13.79□□□□□ -0.2
VPS33B-201ENST00000333371 RPGRQ92834 1020 aaKnown RBP13.79□□□□□ -0.2
VPS33B-201ENST00000333371 LRRC4BQ9NT99 713 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 KBTBD4Q9NVX7 518 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 CAPN11Q9UMQ6 739 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 PSMA7O14818 248 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 ADRA2BP18089 450 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 PDE4DQ08499 809 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 MAPK8IP2Q13387 824 aaPredicted RBP13.79□□□□□ -0.2
VPS33B-201ENST00000333371 SBK1Q52WX2 424 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 CERKQ8TCT0 537 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 TGFBRAP1Q8WUH2 860 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 EXOC4Q96A65 974 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 PYM1Q9BRP8 204 aaKnown RBP13.79□□□□□ -0.2
VPS33B-201ENST00000333371 VAT1LQ9HCJ6 419 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 MYO1AQ9UBC5 1043 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 FLT1P17948 1338 aa13.79□□□□□ -0.2
VPS33B-201ENST00000333371 PDE2AO00408 941 aaPredicted RBP13.78□□□□□ -0.2
VPS33B-201ENST00000333371 RHOBTB3O94955 611 aa13.78□□□□□ -0.2
VPS33B-201ENST00000333371 TSPY3P0CV98 308 aa13.78□□□□□ -0.2
VPS33B-201ENST00000333371 TSPY8P0CW00 308 aa13.78□□□□□ -0.2
VPS33B-201ENST00000333371 TBC1D8BQ0IIM8 1120 aa13.78□□□□□ -0.2
VPS33B-201ENST00000333371 GRM4Q14833 912 aa13.78□□□□□ -0.2
VPS33B-201ENST00000333371 SPTY2D1Q68D10 685 aaPredicted RBP13.78□□□□□ -0.2
VPS33B-201ENST00000333371 MAPKAPK5Q8IW41 473 aa13.78□□□□□ -0.2
VPS33B-201ENST00000333371 RIN2Q8WYP3 895 aaPredicted RBP13.78□□□□□ -0.2
VPS33B-201ENST00000333371 CNOT6LQ96LI5 555 aaKnown RBP13.78□□□□□ -0.2
VPS33B-201ENST00000333371 TMEM51Q9NW97 253 aa13.78□□□□□ -0.2
VPS33B-201ENST00000333371 MAGEC2Q9UBF1 373 aaPredicted RBP13.78□□□□□ -0.2
VPS33B-201ENST00000333371 ONECUT3O60422 494 aaPredicted RBP13.78□□□□□ -0.2
VPS33B-201ENST00000333371 CCNT1O60563 726 aaKnown RBP13.78□□□□□ -0.2
VPS33B-201ENST00000333371 EEF1GP26641 437 aaKnown RBP13.78□□□□□ -0.2
VPS33B-201ENST00000333371 TECP42680 631 aa13.78□□□□□ -0.2
VPS33B-201ENST00000333371 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.78□□□□□ -0.2
VPS33B-201ENST00000333371 CABP7Q86V35 215 aa13.78□□□□□ -0.2
VPS33B-201ENST00000333371 JAKMIP2Q96AA8 810 aa13.78□□□□□ -0.2
VPS33B-201ENST00000333371 TMEM47Q9BQJ4 181 aa13.78□□□□□ -0.2
VPS33B-201ENST00000333371 TTYH3Q9C0H2 523 aa13.78□□□□□ -0.2
VPS33B-201ENST00000333371 HAUS4Q9H6D7 363 aa13.78□□□□□ -0.2
VPS33B-201ENST00000333371 NHEJ1Q9H9Q4 299 aaPredicted RBP13.78□□□□□ -0.2
VPS33B-201ENST00000333371 SAR1BQ9Y6B6 198 aa13.78□□□□□ -0.2
VPS33B-201ENST00000333371 PSMD14O00487 310 aa13.77□□□□□ -0.2
VPS33B-201ENST00000333371 SRGNP10124 158 aa13.77□□□□□ -0.2
VPS33B-201ENST00000333371 MYBL2P10244 700 aa13.77□□□□□ -0.2
VPS33B-201ENST00000333371 TNNT3P45378 269 aaPredicted RBP13.77□□□□□ -0.2
VPS33B-201ENST00000333371 ASIC1P78348 528 aa13.77□□□□□ -0.2
VPS33B-201ENST00000333371 TUBB2AQ13885 445 aa13.77□□□□□ -0.2
VPS33B-201ENST00000333371 TSR1Q2NL82 804 aaKnown RBP13.77□□□□□ -0.2
VPS33B-201ENST00000333371 DRC1Q96MC2 740 aa13.77□□□□□ -0.2
VPS33B-201ENST00000333371 TUBB2BQ9BVA1 445 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms