RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 REPS2Q8NFH8 660 aa13.84□□□□□ -0.19
TRIM49B-201ENST00000332682 AGBL1Q96MI9 1066 aa13.84□□□□□ -0.19
TRIM49B-201ENST00000332682 LMBRD1Q9NUN5 540 aa13.84□□□□□ -0.19
TRIM49B-201ENST00000332682 RTEL1Q9NZ71 1219 aa13.84□□□□□ -0.19
TRIM49B-201ENST00000332682 RBBP6Q7Z6E9 1792 aaKnown RBP13.84□□□□□ -0.19
TRIM49B-201ENST00000332682 ELP1O95163 1332 aa13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 ABCB11O95342 1321 aa13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 CCDC194A0A1B0GVG4 234 aa13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 PRPF40AO75400 957 aaKnown RBP13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 ZBTB48P10074 688 aaPredicted RBP13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 MRPL12P52815 198 aaKnown RBP13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 CEBPZQ03701 1054 aaKnown RBP13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 NBR1Q14596 966 aa13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 UBE2SQ16763 222 aa13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 SPRYD7Q5W111 196 aa13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 ANO1Q5XXA6 986 aa13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 KRT25Q7Z3Z0 450 aa13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 LEO1Q8WVC0 666 aaPredicted RBP13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 MS4A4AQ96JQ5 239 aa13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 SPATA32Q96LK8 384 aa13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 GLT8D2Q9H1C3 349 aa13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 TMEM260Q9NX78 707 aa13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 BIN2Q9UBW5 565 aaPredicted RBP13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 CCPG1Q9ULG6 757 aa13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 CLIC4Q9Y696 253 aa13.83□□□□□ -0.2
TRIM49B-201ENST00000332682 WNT7AO00755 349 aa13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 MEIS2O14770 477 aa13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 ZBED4O75132 1171 aa13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 YEATS4O95619 227 aa13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 OAZ1P54368 228 aa13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 CSPP1Q1MSJ5 1256 aa13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 JAKMIP3Q5VZ66 844 aa13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 GPAT2Q6NUI2 795 aa13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 SAPCD2Q86UD0 394 aa13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 CPXCR1Q8N123 301 aa13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 RAVER2Q9HCJ3 691 aaKnown RBP13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 HOXC10Q9NYD6 342 aa13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 PNMA2Q9UL42 364 aa13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 ZNF214Q9UL59 606 aaPredicted RBP13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 NOL7Q9UMY1 257 aaKnown RBP13.82□□□□□ -0.2
TRIM49B-201ENST00000332682 TOMM70O94826 608 aa13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 CETPP11597 493 aa13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 TRAPPC10P48553 1259 aa13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 GTF2A2P52657 109 aa13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 IRX3P78415 501 aaPredicted RBP13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 MKRN3Q13064 507 aaKnown RBP13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 TMEM132BQ14DG7 1078 aa13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 NONOQ15233 471 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 SF3A1Q15459 793 aaKnown RBP13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 USP17L6PQ6QN14 398 aa13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 POTEEQ6S8J3 1075 aa13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 TEX2Q8IWB9 1127 aa13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 LINC00301Q8NCQ3 95 aa13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 ASCC2Q9H1I8 757 aaPredicted RBP13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 RCOR1Q9UKL0 485 aa13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 MRPL11Q9Y3B7 192 aaKnown RBP13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 PCDHB6Q9Y5E3 794 aa13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 MYH7BA7E2Y1 1941 aa13.81□□□□□ -0.2
TRIM49B-201ENST00000332682 PIK3CDO00329 1044 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 ATP2A1O14983 1001 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 ATP2B1P20020 1258 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 PTPAQ15257 358 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 INF2Q27J81 1249 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 LBX2Q6XYB7 198 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 RASAL3Q86YV0 1011 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 CLEC4DQ8WXI8 215 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 BRI3BPQ8WY22 251 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 PGBD1Q96JS3 809 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 P2RX7Q99572 595 aaKnown RBP13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 CTDP1Q9Y5B0 961 aaPredicted RBP13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 CCL15-CCL14A0A0B4J2E2 113 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 GADD45BO75293 160 aaPredicted RBP13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 ALAS1P13196 640 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 PTMSP20962 102 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 HERVK_113P62684 666 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 PABPC4Q13310 644 aaKnown RBP eCLIP13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 AP3B2Q13367 1082 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 SLC39A14Q15043 492 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 STK38Q15208 465 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 CCL15Q16663 113 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 TTC38Q5R3I4 469 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 TEX13BQ9BXU2 312 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 TLL2Q9Y6L7 1015 aa13.8□□□□□ -0.2
TRIM49B-201ENST00000332682 NFIBO00712 420 aa13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 SPTLC2O15270 562 aa13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 YY1P25490 414 aa13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 HOXA13P31271 388 aaPredicted RBP13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 ZNF157P51786 506 aaPredicted RBP13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 GHRHRQ02643 423 aa13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 SNRNP48Q6IEG0 339 aaKnown RBP13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 RGMBQ6NW40 437 aa13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 NEK8Q86SG6 692 aa13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 MB21D1Q8N884 522 aa13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 ZNF784Q8NCA9 323 aaPredicted RBP13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 KCNG4Q8TDN1 519 aa13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 TBCKQ8TEA7 893 aa13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 TBC1D5Q92609 795 aa13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 ANO3Q9BYT9 981 aa13.79□□□□□ -0.2
TRIM49B-201ENST00000332682 HOMER2Q9NSB8 354 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms