RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 SND1Q7KZF4 910 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRAMEF1-201ENST00000332296 GPR161Q8N6U8 529 aaKnown RBP11.35□□□□□ -0.59
PRAMEF1-201ENST00000332296 NLGN2Q8NFZ4 835 aa11.35□□□□□ -0.59
PRAMEF1-201ENST00000332296 NSUN4Q96CB9 384 aaKnown RBP11.35□□□□□ -0.59
PRAMEF1-201ENST00000332296 CCDC34Q96HJ3 373 aa11.35□□□□□ -0.59
PRAMEF1-201ENST00000332296 MYH1P12882 1939 aa11.35□□□□□ -0.59
PRAMEF1-201ENST00000332296 CCDC88AQ3V6T2 1871 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 SPDYE16A6NNV3 312 aaPredicted RBP11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 RIMBP2O15034 1052 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 POLR3GO15318 223 aaPredicted RBP11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 TPM1P09493 284 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 CALM1P0DP23 149 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 CALM2P0DP24 149 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 CALM3P0DP25 149 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 SCG2P13521 617 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 RRAGBQ5VZM2 374 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 FBXO33Q7Z6M2 555 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 GOLGA1Q92805 767 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 UBXN6Q9BZV1 441 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 GNL3LQ9NVN8 582 aaKnown RBP11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 TAB2Q9NYJ8 693 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 CLEC11AQ9Y240 323 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 ITIH6Q6UXX5 1313 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 POM121CA8CG34 1229 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 MECOMQ03112 1051 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 RASGRP2Q7LDG7 609 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 CTCFLQ8NI51 663 aaPredicted RBP11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 RABGGTAQ92696 567 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 CTAGE1Q96RT6 745 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 NAA15Q9BXJ9 866 aaKnown RBP11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 VPS16Q9H269 839 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 DCP1AQ9NPI6 582 aaPredicted RBP11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 PUF60Q9UHX1 559 aaKnown RBP11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 GDAQ9Y2T3 454 aa11.34□□□□□ -0.59
PRAMEF1-201ENST00000332296 PRDX5P30044 214 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 NLRP5P59047 1200 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 FILIP1LQ4L180 1135 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 DALRD3Q5D0E6 543 aaKnown RBP11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 ZNF569Q5MCW4 686 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 ZNF804AQ7Z570 1209 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 RASGRP4Q8TDF6 673 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 GLMNQ92990 594 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 ABHD10Q9NUJ1 306 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 LIMA1Q9UHB6 759 aaKnown RBP11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 MAPK8IP1Q9UQF2 711 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 JAG2Q9Y219 1238 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 GRXCR2A6NFK2 248 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 ORC4O43929 436 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 OAS2P29728 719 aaKnown RBP11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 CYP2C19P33261 490 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 COPB1P53618 953 aaKnown RBP11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 CHMP4BP1P59074 171 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 PAK1Q13153 545 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 PFKFB3Q16875 520 aaPredicted RBP11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 RCSD1Q6JBY9 416 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 C15orf52Q6ZUT6 534 aaKnown RBP11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 CNGA4Q8IV77 575 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 SLC35F6Q8N357 371 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 IQUBQ8NA54 791 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 NELFBQ8WX92 580 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 GPKOWQ92917 476 aaPredicted RBP eCLIP11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 FHDC1Q9C0D6 1143 aaPredicted RBP11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 ZC3H12CQ9C0D7 883 aaKnown RBP11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 ANKZF1Q9H8Y5 726 aa11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 ZCCHC17Q9NP64 241 aaKnown RBP11.33□□□□□ -0.6
PRAMEF1-201ENST00000332296 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.32□□□□□ -0.6
PRAMEF1-201ENST00000332296 TRIM49BA6NDI0 452 aa11.32□□□□□ -0.6
PRAMEF1-201ENST00000332296 N4BP3O15049 544 aa11.32□□□□□ -0.6
PRAMEF1-201ENST00000332296 TXLNAP40222 546 aa11.32□□□□□ -0.6
PRAMEF1-201ENST00000332296 TYW1BQ6NUM6 668 aa11.32□□□□□ -0.6
PRAMEF1-201ENST00000332296 SRGAP1Q7Z6B7 1085 aa11.32□□□□□ -0.6
PRAMEF1-201ENST00000332296 FUT8Q9BYC5 575 aa11.32□□□□□ -0.6
PRAMEF1-201ENST00000332296 RWDD2AQ9UIY3 292 aa11.32□□□□□ -0.6
PRAMEF1-201ENST00000332296 BCS1LQ9Y276 419 aa11.32□□□□□ -0.6
PRAMEF1-201ENST00000332296 PP2D1A8MPX8 630 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 KCNJ18B7U540 433 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 KIF5CO60282 957 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 RPN1P04843 607 aaKnown RBP11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 PCP11498 1178 aaKnown RBP11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 ARHGAP25P42331 645 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 KCNJ12Q14500 433 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 HIC1Q14526 733 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 TCP11X2Q5H9J9 407 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 CC2D2BQ6DHV5 1058 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 CREBRFQ8IUR6 639 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 C4orf32Q8N8J7 132 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 PNKPQ96T60 521 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 CD209Q9NNX6 404 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 ARFGAP3Q9NP61 516 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 CDC23Q9UJX2 597 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 SNED1Q8TER0 1413 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 TSPY2A6NKD2 308 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 SOCS7O14512 581 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 ATP8B1O43520 1251 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 PRCPP42785 496 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 PMS1P54277 932 aaKnown RBP11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 DOK7Q18PE1 504 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 LONRF2Q1L5Z9 754 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms